RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 RANBP1P43487 201 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 ZNF211Q13398 564 aaPredicted RBP16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 KIAA1755Q5JYT7 1200 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 KCNK18Q7Z418 384 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 TRIM59Q8IWR1 403 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 FAM13CQ8NE31 585 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 TTC8Q8TAM2 541 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 ASAP3Q8TDY4 903 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 PIGOQ8TEQ8 1089 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 FBF1Q8TES7 1133 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 OSGEPQ9NPF4 335 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 AHDC1Q5TGY3 1603 aaPredicted RBP16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 ABLIM1O14639 778 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 RASGRF2O14827 1237 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 DDX3YO15523 660 aaKnown RBP16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 RIPK2O43353 540 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 FAM98CQ17RN3 349 aaKnown RBP16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 AADACL2Q6P093 401 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 ARHGAP22Q7Z5H3 698 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 ANKRD42Q8N9B4 389 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 FAM136AQ96C01 138 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 NGLY1Q96IV0 654 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 SH3GLB2Q9NR46 395 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 CNOT7Q9UIV1 285 aaKnown RBP16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 AJAP1Q9UKB5 411 aaPredicted RBP16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 PPP1R9AQ9ULJ8 1098 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 USP17L12C9JPN9 530 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 USP17L21D6R901 530 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 AFPP02771 609 aaKnown RBP16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 SLC9A1P19634 815 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 RPL21P46778 160 aaKnown RBP16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 PTDSS1P48651 473 aaKnown RBP16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 POLE2P56282 527 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 KLC1Q07866 573 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 LONRF1Q17RB8 773 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 HEATR3Q7Z4Q2 680 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 TSG101Q99816 390 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 NUDT12Q9BQG2 462 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 DDX23Q9BUQ8 820 aaKnown RBP16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 TMEM109Q9BVC6 243 aa16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.93■□□□□ 0.3
CSNK1A1-202ENST00000377843 FKBP3Q00688 224 aaKnown RBP16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 CMPK2Q5EBM0 449 aa16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 DDX12PQ92771 950 aa16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 C18orf8Q96DM3 657 aa16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 SLC4A9Q96Q91 983 aa16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 NUDCD1Q96RS6 583 aa16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 TRIM4Q9C037 500 aa16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 ABCF2Q9UG63 623 aa16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 TTC7AQ9ULT0 858 aaPredicted RBP16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 CYTH3O43739 400 aa16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 SKIV2L2P42285 1042 aaKnown RBP16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 C10orf76Q5T2E6 689 aa16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 LARP4BQ92615 738 aaKnown RBP16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 KIFAP3Q92845 792 aa16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 RBM41Q96IZ5 413 aaKnown RBP16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 UBE2OQ9C0C9 1292 aaKnown RBP16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 MYLK2Q9H1R3 596 aa16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 OCEL1Q9H607 264 aa16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 TBC1D7Q9P0N9 293 aa16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 CTNNAL1Q9UBT7 734 aa16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 COL22A1Q8NFW1 1626 aaPredicted RBP16.92■□□□□ 0.3
CSNK1A1-202ENST00000377843 SPATA31A1Q5TZJ5 1347 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 ANKRD63C9JTQ0 380 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 ACADSP16219 412 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 PTGIRP43119 386 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 KCNQ4P56696 695 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 NELFCDQ8IXH7 590 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 CKAP2Q8WWK9 683 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 CALML4Q96GE6 196 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 RIC8AQ9NPQ8 531 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 PFASO15067 1338 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 MROH5Q6ZUA9 1318 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 BAZ2AQ9UIF9 1905 aaKnown RBP16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 DDX3XO00571 662 aaKnown RBP eCLIP16.91■□□□□ 0.31e-25■■■□□ 15.1
CSNK1A1-202ENST00000377843 CYP2D6P10635 497 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 TARSP26639 723 aaKnown RBP16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 TXKP42681 527 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 DDB1Q16531 1140 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 MYOCDQ8IZQ8 938 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 PROM2Q8N271 834 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 DAGLBQ8NCG7 672 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 DNAJC9Q8WXX5 260 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 RAB3IPQ96QF0 476 aaPredicted RBP16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 TRIM7Q9C029 511 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 LRMDAQ9H2I8 198 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 DLEC1Q9Y238 1755 aa16.91■□□□□ 0.3
CSNK1A1-202ENST00000377843 IGSF9BQ9UPX0 1349 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 SHANK3Q9BYB0 1731 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 ENTPD5O75356 428 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 RASA1P20936 1047 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 MAPK7Q13164 816 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 MFSD5Q6N075 450 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 BTNL9Q6UXG8 535 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 TRIM74Q86UV6 250 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 TRIM73Q86UV7 250 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 ENDOVQ8N8Q3 282 aaKnown RBP16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 MARCH10Q8NA82 808 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms