RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 FAM217BQ9NTX9 383 aaPredicted RBP9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 KCPQ6ZWJ8 1503 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 TBX3O15119 743 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 CASP14P31944 242 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 SREBF1P36956 1147 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 MXD4Q14582 209 aaPredicted RBP9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 CCDC155Q8N6L0 562 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 ZNF384Q8TF68 577 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 PIDD1Q9HB75 910 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 OATP04181 439 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 RPA1P27694 616 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 NOLC1Q14978 699 aaKnown RBP eCLIP9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 GLRA4Q5JXX5 417 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 TMTC1Q8IUR5 882 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 FMR1NBQ8N0W7 255 aaPredicted RBP9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 ACAP3Q96P50 834 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 NDST4Q9H3R1 872 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 RIPK3Q9Y572 518 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 RGPD5Q99666 1765 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 MYMKA6NI61 221 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 C2CD2LO14523 706 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 ZBTB24O43167 697 aaPredicted RBP9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 BUB1O43683 1085 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 INSRRP14616 1297 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 CPB1P15086 417 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 EFNA5P52803 228 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 CCDC144BQ3MJ40 725 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 BSPRYQ5W0U4 402 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 TATDN1Q6P1N9 297 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 TAB3Q8N5C8 712 aaPredicted RBP9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 FAM133AQ8N9E0 248 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 BEST2Q8NFU1 509 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 CCSER1Q9C0I3 900 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 PVALEFA0A1B0GWK0 134 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 BNIP3LO60238 219 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 POLR2BP30876 1174 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 ALCAMQ13740 583 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 PPP1R7Q15435 360 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 ZNF699Q32M78 642 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 WDR72Q3MJ13 1102 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 GLB1LQ6UWU2 654 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 ADAT2Q7Z6V5 191 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 GAS2L3Q86XJ1 694 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 PRPF31Q8WWY3 499 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 MKL1Q969V6 931 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 OSMRQ99650 979 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 TRIM31Q9BZY9 425 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 PARP4Q9UKK3 1724 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 FAM86B1E9PN63 330 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 CEP104O60308 925 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 IFNB1P01574 187 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 FAM86B2P0C5J1 330 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 GPC3P51654 580 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 ORC2Q13416 577 aaPredicted RBP9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 EARS2Q5JPH6 523 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 SEL1L2Q5TEA6 688 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 METTL7BQ6UX53 244 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 INTS8Q75QN2 995 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 CYP39A1Q9NYL5 469 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 RNF8O76064 485 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 ARL1P40616 181 aaPredicted RBP9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 OR1G1P47890 313 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 LRRC63Q05C16 580 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 STK4Q13043 487 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 PAK2Q13177 524 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 SURF1Q15526 300 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 FSCN1Q16658 493 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 OR6B2Q6IFH4 312 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 ZNF746Q6NUN9 644 aaPredicted RBP9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 PEX26Q7Z412 305 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 RIOX2Q8IUF8 465 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 DNERQ8NFT8 737 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 C7orf43Q8WVR3 580 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 TMEM39AQ9NV64 488 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 USP20Q9Y2K6 914 aa9.17□□□□□ -0.94
CRNKL1-202ENST00000377340 SHPRHQ149N8 1683 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 LMO7Q8WWI1 1683 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 CTAGE15A4D2H0 777 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 RRN3P2A6NIE6 340 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 RSPH10B2B2RC85 870 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 MED24O75448 989 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 TADA2AO75478 443 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 H2AFZP0C0S5 128 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 RSPH10BP0C881 870 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 CTAGE8P0CG41 777 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 EEF1GP26641 437 aaKnown RBP9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 SSTR3P32745 418 aaPredicted RBP9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 TMEM270Q6UE05 265 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 H2AFVQ71UI9 128 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 CTAGE6Q86UF2 777 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 CTAGE4Q8IX94 777 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 DNAJB3Q8WWF6 145 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 CYP26B1Q9NR63 512 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 MAGED2Q9UNF1 606 aaPredicted RBP9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 GON4LQ3T8J9 2241 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 UQCRHLA0A096LP55 91 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 E7EVH7 732 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 UQCRHP07919 91 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms