RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 KYAT1Q16773 422 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 KLHL14Q9P2G3 628 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 NOC2LQ9Y3T9 749 aaKnown RBP19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 RASSF2P50749 326 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 DYNLT1P63172 113 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 PDE1BQ01064 536 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 RPS6KA2Q15349 733 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 KRT39Q6A163 491 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 C4orf50Q6ZRC1 276 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 CLEC17AQ6ZS10 378 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 CTNND1O60716 968 aaKnown RBP19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 CIITAP33076 1130 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 AP3M2P53677 418 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 HAUS6Q7Z4H7 955 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 GCNAQ96QF7 691 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 CHGBP05060 677 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 ANTXR2P58335 489 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 DONSONQ9NYP3 566 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 DIS3Q9Y2L1 958 aaKnown RBP19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 HIP1RO75146 1068 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 KRT10P13645 584 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 ARHGEF2Q92974 986 aaKnown RBP19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 ABHD10Q9NUJ1 306 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 PSMA2P25787 234 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 PHLDB2Q86SQ0 1253 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 FAM71BQ8TC56 605 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 KIF2CQ99661 725 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 STRIP2Q9ULQ0 834 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 ZDHHC9Q9Y397 364 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 TACC3Q9Y6A5 838 aa19.22■□□□□ 0.67
CLSTN1-202ENST00000377298 MIF4GDA9UHW6 222 aaKnown RBP19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 CPP00450 1065 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 YWHABP31946 246 aaKnown RBP19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 CXCR5P32302 372 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 PLTPP55058 493 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 XKR3Q5GH77 459 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 DNAAF3Q8N9W5 541 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 DEFB129Q9H1M3 183 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 POLD4Q9HCU8 107 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 KIAA0391O15091 583 aaKnown RBP19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 CALB1P05937 261 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 GNGT1P63211 74 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 TAF1CQ15572 869 aaPredicted RBP19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 ENOSF1Q7L5Y1 443 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 CLEC10AQ8IUN9 316 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 PARK7Q99497 189 aaKnown RBP19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 INPP5FQ9Y2H2 1132 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 ZNF394Q53GI3 561 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 GPD1LQ8N335 351 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 CNOT8Q9UFF9 292 aaKnown RBP19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 TMEM270Q6UE05 265 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 EFCAB13Q8IY85 973 aa19.21■□□□□ 0.67
CLSTN1-202ENST00000377298 POC1B-GALNT4F8VUJ3 575 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 DGAT1O75907 488 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 NGRNQ9NPE2 291 aaKnown RBP19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 LRRC53A6NM62 1247 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 SLC25A27O95847 323 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 ZNF18P17022 549 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 ECE1P42892 770 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 TSPY1Q01534 308 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 COL23A1Q86Y22 540 aaPredicted RBP19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 URGCPQ8TCY9 931 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 PDXKO00764 312 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 ATP8B1O43520 1251 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 NR3C2P08235 984 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 BASP1P80723 227 aaKnown RBP19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 CDC42EP1Q00587 391 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 NEURL4Q96JN8 1562 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 SAT1P21673 171 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 GPC5P78333 572 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 TOGARAM2Q6ZUX3 1019 aa19.2■□□□□ 0.66
CLSTN1-202ENST00000377298 STXBP3O00186 592 aa19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 BUB1BO60566 1050 aaPredicted RBP19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 SLMAPQ14BN4 828 aa19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 CACNA2D3Q8IZS8 1091 aa19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 TRIM9Q9C026 710 aa19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 BCAP29Q9UHQ4 241 aa19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 AGO2Q9UKV8 859 aaKnown RBP19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 RYBPQ8N488 228 aaPredicted RBP19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 TMEM39BQ9GZU3 492 aa19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 TMEM131LA2VDJ0 1609 aa19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 INTS2Q9H0H0 1204 aaKnown RBP19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 RGL1Q9NZL6 768 aa19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 CCDC188H7C350 402 aa19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 GSTA1P08263 222 aa19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 GSTA2P09210 222 aa19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 FRMD5Q7Z6J6 570 aa19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 HINFPQ9BQA5 517 aa19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 RBAKQ9NYW8 714 aaPredicted RBP19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 ANAPC7Q9UJX3 599 aa19.19■□□□□ 0.66
CLSTN1-202ENST00000377298 GGPS1O95749 300 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 ZBED1O96006 694 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 MMP14P50281 582 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 SEPT1Q8WYJ6 367 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 KCND2Q9NZV8 630 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 C2orf54Q08AI8 447 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 LLGL1Q15334 1064 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 RPUSD2Q8IZ73 545 aaKnown RBP19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 OR6J1Q8NGC5 347 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 RBM41Q96IZ5 413 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms