RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 MYO9BQ13459 2157 aa24.67■■□□□ 1.54
SRM-201ENST00000376957 WNT7AO00755 349 aa24.67■■□□□ 1.54
SRM-201ENST00000376957 DARSP14868 501 aaKnown RBP24.67■■□□□ 1.54
SRM-201ENST00000376957 SFPQP23246 707 aaKnown RBP eCLIP24.67■■□□□ 1.54
SRM-201ENST00000376957 SARSP49591 514 aaKnown RBP24.67■■□□□ 1.54
SRM-201ENST00000376957 NPEPPSP55786 919 aa24.67■■□□□ 1.54
SRM-201ENST00000376957 CEP89Q96ST8 783 aa24.67■■□□□ 1.54
SRM-201ENST00000376957 DHX33Q9H6R0 707 aaKnown RBP24.67■■□□□ 1.54
SRM-201ENST00000376957 POTEMA6NI47 508 aa24.66■■□□□ 1.54
SRM-201ENST00000376957 DGAT1O75907 488 aa24.66■■□□□ 1.54
SRM-201ENST00000376957 BTG3Q14201 252 aaPredicted RBP24.66■■□□□ 1.54
SRM-201ENST00000376957 FAM228AQ86W67 206 aa24.66■■□□□ 1.54
SRM-201ENST00000376957 FBXO22Q8NEZ5 403 aa24.66■■□□□ 1.54
SRM-201ENST00000376957 NACC1Q96RE7 527 aa24.66■■□□□ 1.54
SRM-201ENST00000376957 MTRQ99707 1265 aa24.66■■□□□ 1.54
SRM-201ENST00000376957 DACT1Q9NYF0 836 aa24.66■■□□□ 1.54
SRM-201ENST00000376957 LMCD1Q9NZU5 365 aa24.66■■□□□ 1.54
SRM-201ENST00000376957 WRAP73Q9P2S5 460 aaPredicted RBP24.66■■□□□ 1.54
SRM-201ENST00000376957 MTUS1Q9ULD2 1270 aa24.66■■□□□ 1.54
SRM-201ENST00000376957 ADGRA3Q8IWK6 1321 aa24.65■■□□□ 1.54
SRM-201ENST00000376957 DGKIO75912 1065 aa24.65■■□□□ 1.54
SRM-201ENST00000376957 MUTP22033 750 aa24.65■■□□□ 1.54
SRM-201ENST00000376957 PTGDRQ13258 359 aa24.65■■□□□ 1.54
SRM-201ENST00000376957 PDIA5Q14554 519 aa24.65■■□□□ 1.54
SRM-201ENST00000376957 MXD4Q14582 209 aaPredicted RBP24.65■■□□□ 1.54
SRM-201ENST00000376957 EMC2Q15006 297 aa24.65■■□□□ 1.54
SRM-201ENST00000376957 RTN4RL1Q86UN2 441 aaPredicted RBP24.65■■□□□ 1.54
SRM-201ENST00000376957 NLRP4Q96MN2 994 aa24.65■■□□□ 1.54
SRM-201ENST00000376957 POLR3CQ9BUI4 534 aaPredicted RBP24.65■■□□□ 1.54
SRM-201ENST00000376957 TMX1Q9H3N1 280 aa24.65■■□□□ 1.54
SRM-201ENST00000376957 CHST12Q9NRB3 414 aa24.65■■□□□ 1.54
SRM-201ENST00000376957 COL4A3BPQ9Y5P4 624 aa24.65■■□□□ 1.54
SRM-201ENST00000376957 TTC3P53804 2025 aa24.64■■□□□ 1.54
SRM-201ENST00000376957 HOXA2O43364 376 aa24.64■■□□□ 1.54
SRM-201ENST00000376957 POU3F3P20264 500 aaPredicted RBP24.64■■□□□ 1.54
SRM-201ENST00000376957 FXR2P51116 673 aaKnown RBP eCLIP24.64■■□□□ 1.54
SRM-201ENST00000376957 CUL4AQ13619 759 aa24.64■■□□□ 1.54
SRM-201ENST00000376957 PTPROQ16827 1216 aa24.64■■□□□ 1.54
SRM-201ENST00000376957 DTHD1Q6ZMT9 781 aa24.64■■□□□ 1.54
SRM-201ENST00000376957 PPM1EQ8WY54 764 aa24.64■■□□□ 1.54
SRM-201ENST00000376957 ATP6V0A4Q9HBG4 840 aa24.64■■□□□ 1.54
SRM-201ENST00000376957 LRWD1Q9UFC0 647 aa24.64■■□□□ 1.54
SRM-201ENST00000376957 A0A087WZ62 844 aa24.63■■□□□ 1.53
SRM-201ENST00000376957 SKIP12755 728 aa24.63■■□□□ 1.53
SRM-201ENST00000376957 IBSPP21815 317 aaPredicted RBP24.63■■□□□ 1.53
SRM-201ENST00000376957 RPA1P27694 616 aa24.63■■□□□ 1.53
SRM-201ENST00000376957 PRPHP41219 470 aa24.63■■□□□ 1.53
SRM-201ENST00000376957 DRP2Q13474 957 aa24.63■■□□□ 1.53
SRM-201ENST00000376957 TFDP1Q14186 410 aa24.63■■□□□ 1.53
SRM-201ENST00000376957 ADGRE1Q14246 886 aa24.63■■□□□ 1.53
SRM-201ENST00000376957 CMTR2Q8IYT2 770 aaKnown RBP24.63■■□□□ 1.53
SRM-201ENST00000376957 PRPF31Q8WWY3 499 aaKnown RBP24.63■■□□□ 1.53
SRM-201ENST00000376957 LINC01599Q8WXQ3 324 aa24.63■■□□□ 1.53
SRM-201ENST00000376957 ZNF668Q96K58 619 aaPredicted RBP24.63■■□□□ 1.53
SRM-201ENST00000376957 FDXACB1Q9BRP7 624 aaPredicted RBP24.63■■□□□ 1.53
SRM-201ENST00000376957 ELAC1Q9H777 363 aaKnown RBP24.63■■□□□ 1.53
SRM-201ENST00000376957 PCDHB6Q9Y5E3 794 aa24.63■■□□□ 1.53
SRM-201ENST00000376957 COL4A6Q14031 1691 aa24.62■■□□□ 1.53
SRM-201ENST00000376957 ARHGEF15O94989 841 aa24.62■■□□□ 1.53
SRM-201ENST00000376957 RB1P06400 928 aa24.62■■□□□ 1.53
SRM-201ENST00000376957 NCBP1Q09161 790 aaKnown RBP24.62■■□□□ 1.53
SRM-201ENST00000376957 EPC2Q52LR7 807 aa24.62■■□□□ 1.53
SRM-201ENST00000376957 SRGAP1Q7Z6B7 1085 aa24.62■■□□□ 1.53
SRM-201ENST00000376957 CATSPER3Q86XQ3 398 aa24.62■■□□□ 1.53
SRM-201ENST00000376957 TMEM192Q8IY95 271 aa24.62■■□□□ 1.53
SRM-201ENST00000376957 MICALL1Q8N3F8 863 aa24.62■■□□□ 1.53
SRM-201ENST00000376957 TMEM143Q96AN5 459 aa24.62■■□□□ 1.53
SRM-201ENST00000376957 ZNF689Q96CS4 500 aaPredicted RBP24.62■■□□□ 1.53
SRM-201ENST00000376957 INTS4Q96HW7 963 aaKnown RBP24.62■■□□□ 1.53
SRM-201ENST00000376957 TMEM161AQ9NX61 479 aa24.62■■□□□ 1.53
SRM-201ENST00000376957 C9IYK1 514 aa24.61■■□□□ 1.53
SRM-201ENST00000376957 RFXAPO00287 272 aa24.61■■□□□ 1.53
SRM-201ENST00000376957 SRGAP2CP0DJJ0 459 aa24.61■■□□□ 1.53
SRM-201ENST00000376957 RARRES1P49788 294 aa24.61■■□□□ 1.53
SRM-201ENST00000376957 TOB1P50616 345 aaPredicted RBP24.61■■□□□ 1.53
SRM-201ENST00000376957 GRB10Q13322 594 aa24.61■■□□□ 1.53
SRM-201ENST00000376957 PCBP1Q15365 356 aaKnown RBP eCLIP24.61■■□□□ 1.532e-6■■■□□ 15.2
SRM-201ENST00000376957 KRT79Q5XKE5 535 aa24.61■■□□□ 1.53
SRM-201ENST00000376957 CATSPER4Q7RTX7 472 aa24.61■■□□□ 1.53
SRM-201ENST00000376957 BRAPQ7Z569 592 aa24.61■■□□□ 1.53
SRM-201ENST00000376957 ABI1Q8IZP0 508 aa24.61■■□□□ 1.53
SRM-201ENST00000376957 C17orf80Q9BSJ5 609 aa24.61■■□□□ 1.53
SRM-201ENST00000376957 DBR1Q9UK59 544 aaKnown RBP24.61■■□□□ 1.53
SRM-201ENST00000376957 K7ELQ4 463 aaPredicted RBP24.6■■□□□ 1.53
SRM-201ENST00000376957 BMP15O95972 392 aa24.6■■□□□ 1.53
SRM-201ENST00000376957 CTNNB1P35222 781 aa24.6■■□□□ 1.53
SRM-201ENST00000376957 CCT6AP40227 531 aaKnown RBP24.6■■□□□ 1.53
SRM-201ENST00000376957 PHKA2P46019 1235 aa24.6■■□□□ 1.53
SRM-201ENST00000376957 LAMTOR4Q0VGL1 99 aa24.6■■□□□ 1.53
SRM-201ENST00000376957 NBR1Q14596 966 aa24.6■■□□□ 1.53
SRM-201ENST00000376957 CCDC85BQ15834 202 aaPredicted RBP24.6■■□□□ 1.53
SRM-201ENST00000376957 FERMT3Q86UX7 667 aa24.6■■□□□ 1.53
SRM-201ENST00000376957 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.6■■□□□ 1.53
SRM-201ENST00000376957 ZNF579Q8NAF0 562 aaKnown RBP24.6■■□□□ 1.53
SRM-201ENST00000376957 MCPH1Q8NEM0 835 aa24.6■■□□□ 1.53
SRM-201ENST00000376957 PIGOQ8TEQ8 1089 aa24.6■■□□□ 1.53
SRM-201ENST00000376957 C11orf84Q9BUA3 381 aaPredicted RBP24.6■■□□□ 1.53
SRM-201ENST00000376957 PLVAPQ9BX97 442 aa24.6■■□□□ 1.53
SRM-201ENST00000376957 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.6■■□□□ 1.53
SRM-201ENST00000376957 AAASQ9NRG9 546 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms