RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 ANAPC4Q9UJX5 808 aa6.53□□□□□ -1.36
SSX1-201ENST00000376919 GDF2Q9UK05 429 aaPredicted RBP6.53□□□□□ -1.36
SSX1-201ENST00000376919 AGTPBP1Q9UPW5 1226 aa6.53□□□□□ -1.36
SSX1-201ENST00000376919 MRPS23Q9Y3D9 190 aaKnown RBP6.53□□□□□ -1.36
SSX1-201ENST00000376919 COMMD10Q9Y6G5 202 aa6.53□□□□□ -1.36
SSX1-201ENST00000376919 GFRA2O00451 464 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 FOXN1O15353 648 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 ORC4O43929 436 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 GSTP1P09211 210 aaKnown RBP6.52□□□□□ -1.37
SSX1-201ENST00000376919 NAT2P11245 290 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 ESRRAP11474 423 aaPredicted RBP6.52□□□□□ -1.37
SSX1-201ENST00000376919 VCAM1P19320 739 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 CCNFP41002 786 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 TM4SF4P48230 202 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 NT5C2P49902 561 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 LBX1P52954 281 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 JAG1P78504 1218 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 SRSF11Q05519 484 aaKnown RBP6.52□□□□□ -1.37
SSX1-201ENST00000376919 CRHR2Q13324 411 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 MAP7Q14244 749 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 CCDC178Q5BJE1 867 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 WIPI1Q5MNZ9 446 aaPredicted RBP6.52□□□□□ -1.37
SSX1-201ENST00000376919 TREML2Q5T2D2 321 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 WDR78Q5VTH9 848 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 FOXB2Q5VYV0 432 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 CNNM4Q6P4Q7 775 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 NFXL1Q6ZNB6 911 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 SLCO4C1Q6ZQN7 724 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 TSHZ1Q6ZSZ6 1077 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 FAM43AQ8N2R8 423 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 PPM1KQ8N3J5 372 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 NEDD1Q8NHV4 660 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 ACER1Q8TDN7 264 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 KLHL6Q8WZ60 621 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 LPAR1Q92633 364 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 PAGR1Q9BTK6 254 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 ASPSCR1Q9BZE9 553 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 LSG1Q9H089 658 aaKnown RBP6.52□□□□□ -1.37
SSX1-201ENST00000376919 KIAA1683Q9H0B3 1180 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 SMG9Q9H0W8 520 aaKnown RBP6.52□□□□□ -1.37
SSX1-201ENST00000376919 RPAP3Q9H6T3 665 aaPredicted RBP6.52□□□□□ -1.37
SSX1-201ENST00000376919 KAT14Q9H8E8 782 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 UPF2Q9HAU5 1272 aaKnown RBP6.52□□□□□ -1.37
SSX1-201ENST00000376919 ZCCHC17Q9NP64 241 aaKnown RBP6.52□□□□□ -1.37
SSX1-201ENST00000376919 INCENPQ9NQS7 918 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 CACNA2D2Q9NY47 1150 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 REV1Q9UBZ9 1251 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 NAP1L2Q9ULW6 460 aaPredicted RBP6.52□□□□□ -1.37
SSX1-201ENST00000376919 PCDHB10Q9UN67 800 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 PCDHA4Q9UN74 947 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.52□□□□□ -1.37
SSX1-201ENST00000376919 TACC3Q9Y6A5 838 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 PLIN4Q96Q06 1357 aa6.52□□□□□ -1.37
SSX1-201ENST00000376919 TNKSO95271 1327 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 TRAV20A0A0B4J274 112 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 E7EWF7 191 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 IFIT3O14879 490 aaKnown RBP6.51□□□□□ -1.37
SSX1-201ENST00000376919 SLC27A2O14975 620 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 WDR46O15213 610 aaKnown RBP6.51□□□□□ -1.37
SSX1-201ENST00000376919 DHX16O60231 1041 aaKnown RBP6.51□□□□□ -1.37
SSX1-201ENST00000376919 NMT2O60551 498 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 FKTNO75072 461 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 KATNA1O75449 491 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 FLOT1O75955 427 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 CYP21A2P08686 494 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 CYP2C8P10632 490 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 ALAS2P22557 587 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 GUCY1A2P33402 732 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 SLC1A4P43007 532 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 NEK2P51955 445 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 ZNF143P52747 638 aaPredicted RBP6.51□□□□□ -1.37
SSX1-201ENST00000376919 KRT32Q14532 448 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 PLS1Q14651 629 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 ARHGEF6Q15052 776 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 FAM83BQ5T0W9 1011 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 IFIT1BQ5T764 474 aaKnown RBP6.51□□□□□ -1.37
SSX1-201ENST00000376919 CDCP2Q5VXM1 449 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 CREB3L3Q68CJ9 461 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 LRRTM3Q86VH5 581 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 MAP4K1Q92918 833 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 ERO1AQ96HE7 468 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 ADAM19Q9H013 955 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 VCPKMTQ9H867 229 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 MTMR4Q9NYA4 1195 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 NYAP2Q9P242 653 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 CPA4Q9UI42 421 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 SLC45A1Q9Y2W3 748 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 TMX2Q9Y320 296 aa6.51□□□□□ -1.37
SSX1-201ENST00000376919 MGAMO43451 1857 aa6.5□□□□□ -1.37
SSX1-201ENST00000376919 TRBV23-1A0A0A0MS06 115 aa6.5□□□□□ -1.37
SSX1-201ENST00000376919 A0A1W2PRG0 241 aa6.5□□□□□ -1.37
SSX1-201ENST00000376919 CCDC69A6NI79 296 aa6.5□□□□□ -1.37
SSX1-201ENST00000376919 SLC22A31A6NKX4 558 aa6.5□□□□□ -1.37
SSX1-201ENST00000376919 F5H6K3 240 aa6.5□□□□□ -1.37
SSX1-201ENST00000376919 EYA4O95677 639 aa6.5□□□□□ -1.37
SSX1-201ENST00000376919 MYL1P05976 194 aa6.5□□□□□ -1.37
SSX1-201ENST00000376919 HSPA8P11142 646 aaKnown RBP6.5□□□□□ -1.37
SSX1-201ENST00000376919 TOP1P11387 765 aaKnown RBP6.5□□□□□ -1.37
SSX1-201ENST00000376919 EPXP11678 715 aa6.5□□□□□ -1.37
SSX1-201ENST00000376919 SELPP16109 830 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms