RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 ARHGEF35A5YM69 484 aa25.2■■□□□ 1.62
YIF1A-202ENST00000376899 USO1O60763 962 aaKnown RBP25.2■■□□□ 1.62
YIF1A-202ENST00000376899 EFCAB14O75071 495 aa25.2■■□□□ 1.62
YIF1A-202ENST00000376899 FOXD4L6Q3SYB3 417 aaPredicted RBP25.2■■□□□ 1.62
YIF1A-202ENST00000376899 FOXD4L3Q6VB84 417 aaPredicted RBP25.2■■□□□ 1.62
YIF1A-202ENST00000376899 ZNF410Q86VK4 478 aa25.2■■□□□ 1.62
YIF1A-202ENST00000376899 PSPC1Q8WXF1 523 aaKnown RBP25.2■■□□□ 1.62
YIF1A-202ENST00000376899 TMEM143Q96AN5 459 aa25.2■■□□□ 1.62
YIF1A-202ENST00000376899 CLIC6Q96NY7 704 aa25.2■■□□□ 1.62
YIF1A-202ENST00000376899 PPP1R16BQ96T49 567 aa25.2■■□□□ 1.62
YIF1A-202ENST00000376899 BHMT2Q9H2M3 363 aa25.2■■□□□ 1.62
YIF1A-202ENST00000376899 DAXXQ9UER7 740 aaPredicted RBP25.2■■□□□ 1.62
YIF1A-202ENST00000376899 CFAP45Q9UL16 551 aa25.2■■□□□ 1.62
YIF1A-202ENST00000376899 DNM3Q9UQ16 869 aa25.2■■□□□ 1.62
YIF1A-202ENST00000376899 GINS2Q9Y248 185 aa25.2■■□□□ 1.62
YIF1A-202ENST00000376899 E9PMD0 336 aa25.19■■□□□ 1.62
YIF1A-202ENST00000376899 NUCB2P80303 420 aa25.19■■□□□ 1.62
YIF1A-202ENST00000376899 IKBKEQ14164 716 aa25.19■■□□□ 1.62
YIF1A-202ENST00000376899 PADI6Q6TGC4 694 aa25.19■■□□□ 1.62
YIF1A-202ENST00000376899 FAM43BQ6ZT52 329 aaPredicted RBP25.19■■□□□ 1.62
YIF1A-202ENST00000376899 RHPN2Q8IUC4 686 aa25.19■■□□□ 1.62
YIF1A-202ENST00000376899 MCPH1Q8NEM0 835 aa25.19■■□□□ 1.62
YIF1A-202ENST00000376899 CALML4Q96GE6 196 aa25.19■■□□□ 1.62
YIF1A-202ENST00000376899 CDK5RAP3Q96JB5 506 aa25.19■■□□□ 1.62
YIF1A-202ENST00000376899 NOC2LQ9Y3T9 749 aaKnown RBP25.19■■□□□ 1.62
YIF1A-202ENST00000376899 ATP6V1DQ9Y5K8 247 aa25.19■■□□□ 1.62
YIF1A-202ENST00000376899 COL4A3BPQ9Y5P4 624 aa25.19■■□□□ 1.62
YIF1A-202ENST00000376899 ASAP2O43150 1006 aa25.18■■□□□ 1.62
YIF1A-202ENST00000376899 DARSP14868 501 aaKnown RBP25.18■■□□□ 1.62
YIF1A-202ENST00000376899 CYP11B2P19099 503 aa25.18■■□□□ 1.62
YIF1A-202ENST00000376899 CD52P31358 61 aa25.18■■□□□ 1.62
YIF1A-202ENST00000376899 ARL2P36404 184 aa25.18■■□□□ 1.62
YIF1A-202ENST00000376899 WDR5P61964 334 aaKnown RBP25.18■■□□□ 1.62
YIF1A-202ENST00000376899 USP49Q70CQ1 688 aa25.18■■□□□ 1.62
YIF1A-202ENST00000376899 KCNG4Q8TDN1 519 aa25.18■■□□□ 1.62
YIF1A-202ENST00000376899 ERVK-5Q9HDB9 667 aa25.18■■□□□ 1.62
YIF1A-202ENST00000376899 PADI3Q9ULW8 664 aa25.18■■□□□ 1.62
YIF1A-202ENST00000376899 SLC4A7Q9Y6M7 1214 aa25.18■■□□□ 1.62
YIF1A-202ENST00000376899 ZBBXA8MT70 800 aa25.17■■□□□ 1.62
YIF1A-202ENST00000376899 EIF4BP23588 611 aaKnown RBP25.17■■□□□ 1.62
YIF1A-202ENST00000376899 LAMTOR4Q0VGL1 99 aa25.17■■□□□ 1.62
YIF1A-202ENST00000376899 PAK2Q13177 524 aa25.17■■□□□ 1.62
YIF1A-202ENST00000376899 ZRSR1Q15695 479 aaKnown RBP25.17■■□□□ 1.62
YIF1A-202ENST00000376899 ODR4Q5SWX8 454 aa25.17■■□□□ 1.62
YIF1A-202ENST00000376899 FAM228AQ86W67 206 aa25.17■■□□□ 1.62
YIF1A-202ENST00000376899 LRRC15Q8TF66 581 aa25.17■■□□□ 1.62
YIF1A-202ENST00000376899 PRPF31Q8WWY3 499 aaKnown RBP25.17■■□□□ 1.62
YIF1A-202ENST00000376899 NLRP7Q8WX94 980 aa25.17■■□□□ 1.62
YIF1A-202ENST00000376899 SYMPKQ92797 1274 aaKnown RBP25.17■■□□□ 1.62
YIF1A-202ENST00000376899 EPSTI1Q96J88 318 aa25.17■■□□□ 1.62
YIF1A-202ENST00000376899 SLC9A7Q96T83 725 aa25.17■■□□□ 1.62
YIF1A-202ENST00000376899 RCOR1Q9UKL0 485 aa25.17■■□□□ 1.62
YIF1A-202ENST00000376899 GBF1Q92538 1859 aa25.17■■□□□ 1.62
YIF1A-202ENST00000376899 A0A087WZ62 844 aa25.16■■□□□ 1.62
YIF1A-202ENST00000376899 RPS6KA5O75582 802 aa25.16■■□□□ 1.62
YIF1A-202ENST00000376899 PLCG1P19174 1290 aa25.16■■□□□ 1.62
YIF1A-202ENST00000376899 MXD4Q14582 209 aaPredicted RBP25.16■■□□□ 1.62
YIF1A-202ENST00000376899 KARSQ15046 597 aaKnown RBP25.16■■□□□ 1.62
YIF1A-202ENST00000376899 SPECC1Q5M775 1068 aa25.16■■□□□ 1.62
YIF1A-202ENST00000376899 KSR1Q8IVT5 923 aa25.16■■□□□ 1.62
YIF1A-202ENST00000376899 ZNF668Q96K58 619 aaPredicted RBP25.16■■□□□ 1.62
YIF1A-202ENST00000376899 PLIN2Q99541 437 aa25.16■■□□□ 1.62
YIF1A-202ENST00000376899 FDXACB1Q9BRP7 624 aaPredicted RBP25.16■■□□□ 1.62
YIF1A-202ENST00000376899 GCOM2Q9BZD3 368 aaPredicted RBP25.16■■□□□ 1.62
YIF1A-202ENST00000376899 GPR182O15218 404 aa25.15■■□□□ 1.62
YIF1A-202ENST00000376899 CUTAO60888 179 aa25.15■■□□□ 1.62
YIF1A-202ENST00000376899 KRT85P78386 507 aa25.15■■□□□ 1.62
YIF1A-202ENST00000376899 POU5F1BQ06416 359 aa25.15■■□□□ 1.62
YIF1A-202ENST00000376899 SYT2Q8N9I0 419 aaPredicted RBP25.15■■□□□ 1.62
YIF1A-202ENST00000376899 PHOSPHO2Q8TCD6 241 aa25.15■■□□□ 1.62
YIF1A-202ENST00000376899 ASAP3Q8TDY4 903 aa25.15■■□□□ 1.62
YIF1A-202ENST00000376899 NLRP4Q96MN2 994 aa25.15■■□□□ 1.62
YIF1A-202ENST00000376899 SCLT1Q96NL6 688 aa25.15■■□□□ 1.62
YIF1A-202ENST00000376899 FTHL17Q9BXU8 183 aa25.15■■□□□ 1.62
YIF1A-202ENST00000376899 POLR3FQ9H1D9 316 aaPredicted RBP25.15■■□□□ 1.62
YIF1A-202ENST00000376899 IFT122Q9HBG6 1241 aa25.15■■□□□ 1.62
YIF1A-202ENST00000376899 BLOC1S4Q9NUP1 217 aa25.15■■□□□ 1.62
YIF1A-202ENST00000376899 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.14■■□□□ 1.62
YIF1A-202ENST00000376899 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.14■■□□□ 1.62
YIF1A-202ENST00000376899 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.14■■□□□ 1.62
YIF1A-202ENST00000376899 GLRA2P23416 452 aa25.14■■□□□ 1.62
YIF1A-202ENST00000376899 TXLNAP40222 546 aa25.14■■□□□ 1.62
YIF1A-202ENST00000376899 KCNJ6P48051 423 aa25.14■■□□□ 1.62
YIF1A-202ENST00000376899 SLC12A3P55017 1021 aa25.14■■□□□ 1.62
YIF1A-202ENST00000376899 SMAD3P84022 425 aaKnown RBP25.14■■□□□ 1.62
YIF1A-202ENST00000376899 AXDND1Q5T1B0 1012 aaPredicted RBP25.14■■□□□ 1.62
YIF1A-202ENST00000376899 FAM109BQ6ICB4 259 aaPredicted RBP25.14■■□□□ 1.62
YIF1A-202ENST00000376899 RINT1Q6NUQ1 792 aa25.14■■□□□ 1.62
YIF1A-202ENST00000376899 C1orf186Q6ZWK4 172 aa25.14■■□□□ 1.62
YIF1A-202ENST00000376899 IFNLR1Q8IU57 520 aaPredicted RBP25.14■■□□□ 1.62
YIF1A-202ENST00000376899 LINC01599Q8WXQ3 324 aa25.14■■□□□ 1.62
YIF1A-202ENST00000376899 TMX1Q9H3N1 280 aa25.14■■□□□ 1.62
YIF1A-202ENST00000376899 GPRC5CQ9NQ84 441 aa25.14■■□□□ 1.62
YIF1A-202ENST00000376899 CIZ1Q9ULV3 898 aaPredicted RBP25.14■■□□□ 1.62
YIF1A-202ENST00000376899 ST3GAL5Q9UNP4 418 aa25.14■■□□□ 1.62
YIF1A-202ENST00000376899 SOX1O00570 391 aaPredicted RBP25.13■■□□□ 1.61
YIF1A-202ENST00000376899 PLA2G4BP0C869 781 aa25.13■■□□□ 1.61
YIF1A-202ENST00000376899 ATP2A2P16615 1042 aaKnown RBP25.13■■□□□ 1.61
YIF1A-202ENST00000376899 DEFB103AP81534 67 aa25.13■■□□□ 1.61
YIF1A-202ENST00000376899 CAPSQ13938 189 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms