RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 NLRP7Q8WX94 980 aa23.67■■□□□ 1.38
VSX1-201ENST00000376707 LRFN3Q9BTN0 628 aa23.67■■□□□ 1.38
VSX1-201ENST00000376707 TYW1Q9NV66 732 aaKnown RBP23.67■■□□□ 1.38
VSX1-201ENST00000376707 KIAA1671Q9BY89 1806 aa23.66■■□□□ 1.38
VSX1-201ENST00000376707 MYO7AQ13402 2215 aa23.66■■□□□ 1.38
VSX1-201ENST00000376707 HOXA2O43364 376 aa23.66■■□□□ 1.38
VSX1-201ENST00000376707 TBX10O75333 385 aa23.66■■□□□ 1.38
VSX1-201ENST00000376707 CENPBP07199 599 aaPredicted RBP23.66■■□□□ 1.38
VSX1-201ENST00000376707 DARSP14868 501 aaKnown RBP23.66■■□□□ 1.38
VSX1-201ENST00000376707 UBE3AQ05086 875 aa23.66■■□□□ 1.38
VSX1-201ENST00000376707 ADAM15Q13444 863 aa23.66■■□□□ 1.38
VSX1-201ENST00000376707 CSPP1Q1MSJ5 1256 aa23.66■■□□□ 1.38
VSX1-201ENST00000376707 ADGRD2Q7Z7M1 963 aa23.66■■□□□ 1.38
VSX1-201ENST00000376707 THNSL1Q8IYQ7 743 aa23.66■■□□□ 1.38
VSX1-201ENST00000376707 MICAL1Q8TDZ2 1067 aa23.66■■□□□ 1.38
VSX1-201ENST00000376707 PHF20Q9BVI0 1012 aa23.66■■□□□ 1.38
VSX1-201ENST00000376707 NIFKQ9BYG3 293 aaKnown RBP23.66■■□□□ 1.38
VSX1-201ENST00000376707 TMEM117Q9H0C3 514 aa23.66■■□□□ 1.38
VSX1-201ENST00000376707 HCSTQ9UBK5 93 aa23.66■■□□□ 1.38
VSX1-201ENST00000376707 STK36Q9NRP7 1315 aa23.65■■□□□ 1.38
VSX1-201ENST00000376707 ATG2AQ2TAZ0 1938 aa23.65■■□□□ 1.38
VSX1-201ENST00000376707 PFKFB2O60825 505 aa23.65■■□□□ 1.38
VSX1-201ENST00000376707 EIF5BO60841 1220 aaKnown RBP23.65■■□□□ 1.38
VSX1-201ENST00000376707 FGF18O76093 207 aa23.65■■□□□ 1.38
VSX1-201ENST00000376707 LAG3P18627 525 aa23.65■■□□□ 1.38
VSX1-201ENST00000376707 NRIP1P48552 1158 aa23.65■■□□□ 1.38
VSX1-201ENST00000376707 DNM2P50570 870 aa23.65■■□□□ 1.38
VSX1-201ENST00000376707 ZP2Q05996 745 aa23.65■■□□□ 1.38
VSX1-201ENST00000376707 RBM23Q86U06 439 aaKnown RBP23.65■■□□□ 1.38
VSX1-201ENST00000376707 ADHFE1Q8IWW8 467 aa23.65■■□□□ 1.38
VSX1-201ENST00000376707 ABI1Q8IZP0 508 aa23.65■■□□□ 1.38
VSX1-201ENST00000376707 COLGALT1Q8NBJ5 622 aa23.65■■□□□ 1.38
VSX1-201ENST00000376707 CD207Q9UJ71 328 aa23.65■■□□□ 1.38
VSX1-201ENST00000376707 TPCN1Q9ULQ1 816 aa23.65■■□□□ 1.38
VSX1-201ENST00000376707 TMEM150BA6NC51 233 aa23.64■■□□□ 1.37
VSX1-201ENST00000376707 FAM86C2PA6NEL3 165 aa23.64■■□□□ 1.37
VSX1-201ENST00000376707 DDX11L8A8MPP1 907 aa23.64■■□□□ 1.37
VSX1-201ENST00000376707 MBTPS2O43462 519 aa23.64■■□□□ 1.37
VSX1-201ENST00000376707 SLC37A4O43826 429 aa23.64■■□□□ 1.37
VSX1-201ENST00000376707 GPR37L1O60883 481 aa23.64■■□□□ 1.37
VSX1-201ENST00000376707 CDC42EP1Q00587 391 aa23.64■■□□□ 1.37
VSX1-201ENST00000376707 DRP2Q13474 957 aa23.64■■□□□ 1.37
VSX1-201ENST00000376707 SMAD4Q13485 552 aaKnown RBP23.64■■□□□ 1.37
VSX1-201ENST00000376707 SMAD2Q15796 467 aaKnown RBP23.64■■□□□ 1.37
VSX1-201ENST00000376707 NEK8Q86SG6 692 aa23.64■■□□□ 1.37
VSX1-201ENST00000376707 EFHBQ8N7U6 833 aa23.64■■□□□ 1.37
VSX1-201ENST00000376707 RNF169Q8NCN4 708 aa23.64■■□□□ 1.37
VSX1-201ENST00000376707 SH2D3AQ9BRG2 576 aa23.64■■□□□ 1.37
VSX1-201ENST00000376707 TLR9Q9NR96 1032 aa23.64■■□□□ 1.37
VSX1-201ENST00000376707 STBD1O95210 358 aa23.63■■□□□ 1.37
VSX1-201ENST00000376707 ALADP13716 330 aa23.63■■□□□ 1.37
VSX1-201ENST00000376707 FGFR4P22455 802 aa23.63■■□□□ 1.37
VSX1-201ENST00000376707 PSMC5P62195 406 aa23.63■■□□□ 1.37
VSX1-201ENST00000376707 ANKRD1Q15327 319 aa23.63■■□□□ 1.37
VSX1-201ENST00000376707 ECHDC2Q86YB7 292 aa23.63■■□□□ 1.37
VSX1-201ENST00000376707 FAM20AQ96MK3 541 aa23.63■■□□□ 1.37
VSX1-201ENST00000376707 GCOM2Q9BZD3 368 aaPredicted RBP23.63■■□□□ 1.37
VSX1-201ENST00000376707 CWH43Q9H720 699 aa23.63■■□□□ 1.37
VSX1-201ENST00000376707 TLE6Q9H808 572 aa23.63■■□□□ 1.37
VSX1-201ENST00000376707 PCDHGC5Q9Y5F6 944 aa23.63■■□□□ 1.37
VSX1-201ENST00000376707 GCFC2P16383 781 aaKnown RBP23.62■■□□□ 1.37
VSX1-201ENST00000376707 PPP4R3AQ6IN85 833 aa23.62■■□□□ 1.37
VSX1-201ENST00000376707 LRRC43Q8N309 656 aa23.62■■□□□ 1.37
VSX1-201ENST00000376707 CASD1Q96PB1 797 aa23.62■■□□□ 1.37
VSX1-201ENST00000376707 POP1Q99575 1024 aaKnown RBP23.62■■□□□ 1.37
VSX1-201ENST00000376707 C11orf16Q9NQ32 467 aa23.62■■□□□ 1.37
VSX1-201ENST00000376707 GJB4Q9NTQ9 266 aa23.62■■□□□ 1.37
VSX1-201ENST00000376707 DACT1Q9NYF0 836 aa23.62■■□□□ 1.37
VSX1-201ENST00000376707 IGKV6-21A0A0C4DH24 114 aa23.61■■□□□ 1.37
VSX1-201ENST00000376707 MARCH6O60337 910 aa23.61■■□□□ 1.37
VSX1-201ENST00000376707 CCNT1O60563 726 aaKnown RBP23.61■■□□□ 1.37
VSX1-201ENST00000376707 DTNBO60941 627 aa23.61■■□□□ 1.37
VSX1-201ENST00000376707 CSDE1O75534 798 aaKnown RBP23.61■■□□□ 1.37
VSX1-201ENST00000376707 PPP2R5CQ13362 524 aa23.61■■□□□ 1.37
VSX1-201ENST00000376707 PDE12Q6L8Q7 609 aaKnown RBP23.61■■□□□ 1.37
VSX1-201ENST00000376707 PIK3AP1Q6ZUJ8 805 aa23.61■■□□□ 1.37
VSX1-201ENST00000376707 WASF1Q92558 559 aa23.61■■□□□ 1.37
VSX1-201ENST00000376707 MSLNLQ96KJ4 702 aa23.61■■□□□ 1.37
VSX1-201ENST00000376707 CEP89Q96ST8 783 aa23.61■■□□□ 1.37
VSX1-201ENST00000376707 NAP1L4Q99733 375 aaKnown RBP23.61■■□□□ 1.37
VSX1-201ENST00000376707 JPH2Q9BR39 696 aaPredicted RBP23.61■■□□□ 1.37
VSX1-201ENST00000376707 KCNMB3Q9NPA1 279 aa23.61■■□□□ 1.37
VSX1-201ENST00000376707 RNF19AQ9NV58 838 aa23.61■■□□□ 1.37
VSX1-201ENST00000376707 SUCLA2Q9P2R7 463 aaPredicted RBP23.61■■□□□ 1.37
VSX1-201ENST00000376707 ORC3Q9UBD5 711 aaPredicted RBP23.61■■□□□ 1.37
VSX1-201ENST00000376707 PUF60Q9UHX1 559 aaKnown RBP23.61■■□□□ 1.37
VSX1-201ENST00000376707 HCN4Q9Y3Q4 1203 aa23.61■■□□□ 1.37
VSX1-201ENST00000376707 FNDC1Q4ZHG4 1894 aaPredicted RBP23.61■■□□□ 1.37
VSX1-201ENST00000376707 A0A087WZ62 844 aa23.6■■□□□ 1.37
VSX1-201ENST00000376707 A0A0U1RQF3 1178 aa23.6■■□□□ 1.37
VSX1-201ENST00000376707 C19orf67A6NJJ6 358 aa23.6■■□□□ 1.37
VSX1-201ENST00000376707 EML1O00423 815 aa23.6■■□□□ 1.37
VSX1-201ENST00000376707 DKC1O60832 514 aaKnown RBP eCLIP23.6■■□□□ 1.37
VSX1-201ENST00000376707 MAFO75444 373 aaPredicted RBP23.6■■□□□ 1.37
VSX1-201ENST00000376707 SFPQP23246 707 aaKnown RBP eCLIP23.6■■□□□ 1.37
VSX1-201ENST00000376707 QARSP47897 775 aaKnown RBP23.6■■□□□ 1.37
VSX1-201ENST00000376707 AK2P54819 239 aa23.6■■□□□ 1.37
VSX1-201ENST00000376707 ERVFC1P60507 584 aa23.6■■□□□ 1.37
VSX1-201ENST00000376707 ANO5Q75V66 913 aa23.6■■□□□ 1.37
VSX1-201ENST00000376707 RHPN2Q8IUC4 686 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms