RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 BLIDQ8IZY5 108 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 COLGALT1Q8NBJ5 622 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 NLRP7Q8WX94 980 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 GCOM2Q9BZD3 368 aaPredicted RBP16.61■□□□□ 0.25
HDAC6-204ENST00000376643 KCNH6Q9H252 994 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 CDHR5Q9HBB8 845 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 NGRNQ9NPE2 291 aaKnown RBP16.61■□□□□ 0.25
HDAC6-204ENST00000376643 PPME1Q9Y570 386 aa16.61■□□□□ 0.25
HDAC6-204ENST00000376643 EOMESO95936 686 aa16.6■□□□□ 0.25
HDAC6-204ENST00000376643 DARSP14868 501 aaKnown RBP16.6■□□□□ 0.25
HDAC6-204ENST00000376643 GCFC2P16383 781 aaKnown RBP16.6■□□□□ 0.25
HDAC6-204ENST00000376643 SFPQP23246 707 aaKnown RBP eCLIP16.6■□□□□ 0.25
HDAC6-204ENST00000376643 NRIP1P48552 1158 aa16.6■□□□□ 0.25
HDAC6-204ENST00000376643 GPC3P51654 580 aa16.6■□□□□ 0.25
HDAC6-204ENST00000376643 LINC01465Q8N7H1 131 aa16.6■□□□□ 0.25
HDAC6-204ENST00000376643 SMRP1Q8NCR6 262 aa16.6■□□□□ 0.25
HDAC6-204ENST00000376643 KHSRPQ92945 711 aaKnown RBP eCLIP16.6■□□□□ 0.25
HDAC6-204ENST00000376643 ZNF558Q96NG5 402 aa16.6■□□□□ 0.25
HDAC6-204ENST00000376643 UIMC1Q96RL1 719 aa16.6■□□□□ 0.25
HDAC6-204ENST00000376643 PPP1R16BQ96T49 567 aa16.6■□□□□ 0.25
HDAC6-204ENST00000376643 NIFKQ9BYG3 293 aaKnown RBP16.6■□□□□ 0.25
HDAC6-204ENST00000376643 ADAMTS10Q9H324 1103 aa16.6■□□□□ 0.25
HDAC6-204ENST00000376643 NCOA5Q9HCD5 579 aaKnown RBP16.6■□□□□ 0.25
HDAC6-204ENST00000376643 CHST12Q9NRB3 414 aa16.6■□□□□ 0.25
HDAC6-204ENST00000376643 TYW1Q9NV66 732 aaKnown RBP16.6■□□□□ 0.25
HDAC6-204ENST00000376643 SEPT9Q9UHD8 586 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-204ENST00000376643 FAM86C2PA6NEL3 165 aa16.59■□□□□ 0.25
HDAC6-204ENST00000376643 ZNF862O60290 1169 aa16.59■□□□□ 0.25
HDAC6-204ENST00000376643 PPFIA3O75145 1194 aa16.59■□□□□ 0.25
HDAC6-204ENST00000376643 PSMD10O75832 226 aa16.59■□□□□ 0.25
HDAC6-204ENST00000376643 NEFLP07196 543 aa16.59■□□□□ 0.25
HDAC6-204ENST00000376643 DNAJB1P25685 340 aa16.59■□□□□ 0.25
HDAC6-204ENST00000376643 GATMP50440 423 aa16.59■□□□□ 0.25
HDAC6-204ENST00000376643 TOB2Q14106 344 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-204ENST00000376643 CLUL1Q15846 466 aa16.59■□□□□ 0.25
HDAC6-204ENST00000376643 FAM102BQ5T8I3 360 aa16.59■□□□□ 0.25
HDAC6-204ENST00000376643 ZNF410Q86VK4 478 aa16.59■□□□□ 0.25
HDAC6-204ENST00000376643 LRRC71Q8N4P6 559 aa16.59■□□□□ 0.25
HDAC6-204ENST00000376643 MRPS27Q92552 414 aaKnown RBP16.59■□□□□ 0.25
HDAC6-204ENST00000376643 MSLNLQ96KJ4 702 aa16.59■□□□□ 0.25
HDAC6-204ENST00000376643 UNC45AQ9H3U1 944 aa16.59■□□□□ 0.25
HDAC6-204ENST00000376643 C11orf16Q9NQ32 467 aa16.59■□□□□ 0.25
HDAC6-204ENST00000376643 RAPGEFL1Q9UHV5 662 aa16.59■□□□□ 0.25
HDAC6-204ENST00000376643 A0A0U1RQF3 1178 aa16.58■□□□□ 0.24
HDAC6-204ENST00000376643 CCDC194A0A1B0GVG4 234 aa16.58■□□□□ 0.24
HDAC6-204ENST00000376643 FGFR1P11362 822 aa16.58■□□□□ 0.24
HDAC6-204ENST00000376643 ATF7P17544 494 aaPredicted RBP16.58■□□□□ 0.24
HDAC6-204ENST00000376643 IRS1P35568 1242 aa16.58■□□□□ 0.24
HDAC6-204ENST00000376643 PSMC5P62195 406 aa16.58■□□□□ 0.24
HDAC6-204ENST00000376643 DLX2Q07687 328 aaPredicted RBP16.58■□□□□ 0.24
HDAC6-204ENST00000376643 DUSP6Q16828 381 aa16.58■□□□□ 0.24
HDAC6-204ENST00000376643 HERC4Q5GLZ8 1057 aaPredicted RBP16.58■□□□□ 0.24
HDAC6-204ENST00000376643 ECHDC2Q86YB7 292 aa16.58■□□□□ 0.24
HDAC6-204ENST00000376643 WASF1Q92558 559 aa16.58■□□□□ 0.24
HDAC6-204ENST00000376643 MFSD14AQ96MC6 490 aa16.58■□□□□ 0.24
HDAC6-204ENST00000376643 FAM20AQ96MK3 541 aa16.58■□□□□ 0.24
HDAC6-204ENST00000376643 ENTPD7Q9NQZ7 604 aa16.58■□□□□ 0.24
HDAC6-204ENST00000376643 PDRG1Q9NUG6 133 aa16.58■□□□□ 0.24
HDAC6-204ENST00000376643 STK39Q9UEW8 545 aa16.58■□□□□ 0.24
HDAC6-204ENST00000376643 DDX25Q9UHL0 483 aaKnown RBP16.58■□□□□ 0.24
HDAC6-204ENST00000376643 LOXHD1Q8IVV2 1947 aa16.58■□□□□ 0.24
HDAC6-204ENST00000376643 MYO7AQ13402 2215 aa16.58■□□□□ 0.24
HDAC6-204ENST00000376643 EVPLQ92817 2033 aa16.57■□□□□ 0.24
HDAC6-204ENST00000376643 STK36Q9NRP7 1315 aa16.57■□□□□ 0.24
HDAC6-204ENST00000376643 RBAK-RBAKDNI3L0D1 243 aa16.57■□□□□ 0.24
HDAC6-204ENST00000376643 LINC01565O15544 149 aa16.57■□□□□ 0.24
HDAC6-204ENST00000376643 GTF2F1P35269 517 aaKnown RBP eCLIP16.57■□□□□ 0.243e-6■■■■□ 25.9
HDAC6-204ENST00000376643 RAB27AP51159 221 aa16.57■□□□□ 0.24
HDAC6-204ENST00000376643 ANKRD1Q15327 319 aa16.57■□□□□ 0.24
HDAC6-204ENST00000376643 TARBP2Q15633 366 aaKnown RBP16.57■□□□□ 0.24
HDAC6-204ENST00000376643 KCNT2Q6UVM3 1135 aa16.57■□□□□ 0.24
HDAC6-204ENST00000376643 ADGRD2Q7Z7M1 963 aa16.57■□□□□ 0.24
HDAC6-204ENST00000376643 RBM23Q86U06 439 aaKnown RBP16.57■□□□□ 0.24
HDAC6-204ENST00000376643 MBOAT7Q96N66 472 aa16.57■□□□□ 0.24
HDAC6-204ENST00000376643 TRAIPQ9BWF2 469 aa16.57■□□□□ 0.24
HDAC6-204ENST00000376643 SLKQ9H2G2 1235 aaPredicted RBP16.57■□□□□ 0.24
HDAC6-204ENST00000376643 CWH43Q9H720 699 aa16.57■□□□□ 0.24
HDAC6-204ENST00000376643 SPG21Q9NZD8 308 aa16.57■□□□□ 0.24
HDAC6-204ENST00000376643 FSCN2O14926 492 aa16.56■□□□□ 0.24
HDAC6-204ENST00000376643 ADAMTS3O15072 1205 aa16.56■□□□□ 0.24
HDAC6-204ENST00000376643 TBX3O15119 743 aa16.56■□□□□ 0.24
HDAC6-204ENST00000376643 GAS2O43903 313 aaKnown RBP16.56■□□□□ 0.24
HDAC6-204ENST00000376643 MARCH6O60337 910 aa16.56■□□□□ 0.24
HDAC6-204ENST00000376643 TDP2O95551 362 aa16.56■□□□□ 0.24
HDAC6-204ENST00000376643 HOXB8P17481 243 aaPredicted RBP16.56■□□□□ 0.24
HDAC6-204ENST00000376643 ALDH7A1P49419 539 aaKnown RBP16.56■□□□□ 0.24
HDAC6-204ENST00000376643 MTERF2Q49AM1 385 aa16.56■□□□□ 0.24
HDAC6-204ENST00000376643 NEK8Q86SG6 692 aa16.56■□□□□ 0.24
HDAC6-204ENST00000376643 RNF169Q8NCN4 708 aa16.56■□□□□ 0.24
HDAC6-204ENST00000376643 ETNPPLQ8TBG4 499 aa16.56■□□□□ 0.24
HDAC6-204ENST00000376643 SLC7A3Q8WY07 619 aa16.56■□□□□ 0.24
HDAC6-204ENST00000376643 CASD1Q96PB1 797 aa16.56■□□□□ 0.24
HDAC6-204ENST00000376643 TCF25Q9BQ70 676 aa16.56■□□□□ 0.24
HDAC6-204ENST00000376643 PHF7Q9BWX1 381 aaPredicted RBP16.56■□□□□ 0.24
HDAC6-204ENST00000376643 BRMS1Q9HCU9 246 aa16.56■□□□□ 0.24
HDAC6-204ENST00000376643 CLEC1BQ9P126 229 aa16.56■□□□□ 0.24
HDAC6-204ENST00000376643 KIAA1671Q9BY89 1806 aa16.56■□□□□ 0.24
HDAC6-204ENST00000376643 FNDC1Q4ZHG4 1894 aaPredicted RBP16.55■□□□□ 0.24
HDAC6-204ENST00000376643 M0R2N6 131 aa16.55■□□□□ 0.24
HDAC6-204ENST00000376643 QARSP47897 775 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms