RNA–Protein interactions for RNA: ENST00000375780.6

CLIC1-207, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-207ENST00000375780 AGO3Q9H9G7 860 aaKnown RBP13.31□□□□□ -0.28
CLIC1-207ENST00000375780 ATP6V0A4Q9HBG4 840 aa13.31□□□□□ -0.28
CLIC1-207ENST00000375780 SUCLA2Q9P2R7 463 aaPredicted RBP13.31□□□□□ -0.28
CLIC1-207ENST00000375780 MSRAQ9UJ68 235 aa13.31□□□□□ -0.28
CLIC1-207ENST00000375780 PADI3Q9ULW8 664 aa13.31□□□□□ -0.28
CLIC1-207ENST00000375780 MORC2Q9Y6X9 1032 aaPredicted RBP13.31□□□□□ -0.28
CLIC1-207ENST00000375780 GPR182O15218 404 aa13.3□□□□□ -0.28
CLIC1-207ENST00000375780 ASAP2O43150 1006 aa13.3□□□□□ -0.28
CLIC1-207ENST00000375780 F13A1P00488 732 aa13.3□□□□□ -0.28
CLIC1-207ENST00000375780 EIF4BP23588 611 aaKnown RBP13.3□□□□□ -0.28
CLIC1-207ENST00000375780 DNAJB2P25686 324 aa13.3□□□□□ -0.28
CLIC1-207ENST00000375780 DRP2Q13474 957 aa13.3□□□□□ -0.28
CLIC1-207ENST00000375780 HERC6Q8IVU3 1022 aa13.3□□□□□ -0.28
CLIC1-207ENST00000375780 NLRP7Q8WX94 980 aa13.3□□□□□ -0.28
CLIC1-207ENST00000375780 ZNF396Q96N95 335 aaPredicted RBP13.3□□□□□ -0.28
CLIC1-207ENST00000375780 PPP1R16BQ96T49 567 aa13.3□□□□□ -0.28
CLIC1-207ENST00000375780 GCOM2Q9BZD3 368 aaPredicted RBP13.3□□□□□ -0.28
CLIC1-207ENST00000375780 INO80BQ9C086 356 aaPredicted RBP13.3□□□□□ -0.28
CLIC1-207ENST00000375780 NT5C3AQ9H0P0 336 aa13.3□□□□□ -0.28
CLIC1-207ENST00000375780 ADAMTS10Q9H324 1103 aa13.3□□□□□ -0.28
CLIC1-207ENST00000375780 CDHR5Q9HBB8 845 aa13.3□□□□□ -0.28
CLIC1-207ENST00000375780 PCDHA11Q9Y5I1 949 aa13.3□□□□□ -0.28
CLIC1-207ENST00000375780 COL4A3BPQ9Y5P4 624 aa13.3□□□□□ -0.28
CLIC1-207ENST00000375780 MYH11P35749 1972 aa13.3□□□□□ -0.28
CLIC1-207ENST00000375780 ARHGEF35A5YM69 484 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 PP2D1A8MPX8 630 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 GRXCR1A8MXD5 290 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 DARSP14868 501 aaKnown RBP13.29□□□□□ -0.28
CLIC1-207ENST00000375780 LONP1P36776 959 aaKnown RBP13.29□□□□□ -0.28
CLIC1-207ENST00000375780 DEFB103AP81534 67 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 MXD4Q14582 209 aaPredicted RBP13.29□□□□□ -0.28
CLIC1-207ENST00000375780 PTPAQ15257 358 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 SKOR2Q2VWA4 1001 aaPredicted RBP13.29□□□□□ -0.28
CLIC1-207ENST00000375780 HYIQ5T013 277 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 FAM173BQ6P4H8 233 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 RHPN2Q8IUC4 686 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 MCPH1Q8NEM0 835 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 TMEM40Q8WWA1 233 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 PBX4Q9BYU1 374 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 ERVK-5Q9HDB9 667 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 XPNPEP1Q9NQW7 623 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 DDX19AQ9NUU7 478 aaKnown RBP13.29□□□□□ -0.28
CLIC1-207ENST00000375780 KIAA1024Q9UPX6 916 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 NOC2LQ9Y3T9 749 aaKnown RBP13.29□□□□□ -0.28
CLIC1-207ENST00000375780 CLIC4Q9Y696 253 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 SZT2Q5T011 3432 aa13.29□□□□□ -0.28
CLIC1-207ENST00000375780 USO1O60763 962 aaKnown RBP13.28□□□□□ -0.28
CLIC1-207ENST00000375780 GJB5O95377 273 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 UBA7P41226 1012 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 NFX1Q12986 1120 aaKnown RBP13.28□□□□□ -0.28
CLIC1-207ENST00000375780 ZNF697Q5TEC3 545 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 FAM228AQ86W67 206 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 MYOCDQ8IZQ8 938 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 TMEM143Q96AN5 459 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 TIFAQ96CG3 184 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 CDK5RAP3Q96JB5 506 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 NLRP4Q96MN2 994 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 USP28Q96RU2 1077 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 MMTAG2Q9BU76 263 aaKnown RBP13.28□□□□□ -0.28
CLIC1-207ENST00000375780 BMP2KQ9NSY1 1161 aaPredicted RBP13.28□□□□□ -0.28
CLIC1-207ENST00000375780 DNM3Q9UQ16 869 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 A0A087WZ62 844 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.28□□□□□ -0.28
CLIC1-207ENST00000375780 GOLGA6L22H0YM25 854 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 TLL1O43897 1013 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 SFPQP23246 707 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLIC1-207ENST00000375780 CDC25AP30304 524 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 NASPP49321 788 aaPredicted RBP13.28□□□□□ -0.28
CLIC1-207ENST00000375780 TFDP1Q14186 410 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 SLC39A14Q15043 492 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 ECM1Q16610 540 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 FOXD4L6Q3SYB3 417 aaPredicted RBP13.28□□□□□ -0.28
CLIC1-207ENST00000375780 L1TD1Q5T7N2 865 aaKnown RBP13.28□□□□□ -0.28
CLIC1-207ENST00000375780 ATL3Q6DD88 541 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 FOXD4L3Q6VB84 417 aaPredicted RBP13.28□□□□□ -0.28
CLIC1-207ENST00000375780 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.28□□□□□ -0.283e-12■■■□□ 16.7
CLIC1-207ENST00000375780 CABP7Q86V35 215 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 PRPF31Q8WWY3 499 aaKnown RBP13.28□□□□□ -0.28
CLIC1-207ENST00000375780 FDXACB1Q9BRP7 624 aaPredicted RBP13.28□□□□□ -0.28
CLIC1-207ENST00000375780 ZBED2Q9BTP6 218 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
CLIC1-207ENST00000375780 BHMT2Q9H2M3 363 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 RNF216Q9NWF9 866 aaPredicted RBP13.28□□□□□ -0.28
CLIC1-207ENST00000375780 ST3GAL5Q9UNP4 418 aa13.28□□□□□ -0.28
CLIC1-207ENST00000375780 SRPRBQ9Y5M8 271 aaKnown RBP13.28□□□□□ -0.28
CLIC1-207ENST00000375780 ENPP3O14638 875 aa13.27□□□□□ -0.29
CLIC1-207ENST00000375780 EYA4O95677 639 aa13.27□□□□□ -0.29
CLIC1-207ENST00000375780 CYP11B2P19099 503 aa13.27□□□□□ -0.29
CLIC1-207ENST00000375780 PBX2P40425 430 aa13.27□□□□□ -0.29
CLIC1-207ENST00000375780 PHKA2P46019 1235 aa13.27□□□□□ -0.29
CLIC1-207ENST00000375780 CEBPZQ03701 1054 aaKnown RBP13.27□□□□□ -0.29
CLIC1-207ENST00000375780 POU5F1BQ06416 359 aa13.27□□□□□ -0.29
CLIC1-207ENST00000375780 LAMTOR4Q0VGL1 99 aa13.27□□□□□ -0.29
CLIC1-207ENST00000375780 STK38Q15208 465 aa13.27□□□□□ -0.29
CLIC1-207ENST00000375780 PADI6Q6TGC4 694 aa13.27□□□□□ -0.29
CLIC1-207ENST00000375780 SRGAP1Q7Z6B7 1085 aa13.27□□□□□ -0.29
CLIC1-207ENST00000375780 TOP1MTQ969P6 601 aa13.27□□□□□ -0.29
CLIC1-207ENST00000375780 CALML4Q96GE6 196 aa13.27□□□□□ -0.29
CLIC1-207ENST00000375780 ZNF668Q96K58 619 aaPredicted RBP13.27□□□□□ -0.29
CLIC1-207ENST00000375780 RAD9AQ99638 391 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms