RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 BEND5Q7L4P6 421 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 TAS2R42Q7RTR8 314 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 GLMNQ92990 594 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 ART5Q96L15 291 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 EXOC7Q9UPT5 735 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 R3HDM2Q9Y2K5 976 aaKnown RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 AKR1B15C9JRZ8 316 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 RNF103O00237 685 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 TSPAN4O14817 238 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 SLC4A2P04920 1241 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 CALM1P0DP23 149 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 CALM2P0DP24 149 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 CALM3P0DP25 149 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 NCF2P19878 526 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 RPS8P62241 208 aaKnown RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 PURAQ00577 322 aaKnown RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 TMEM154Q6P9G4 183 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 BRSK2Q8IWQ3 736 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 HDHD2Q9H0R4 259 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 SCN3BQ9NY72 215 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 CNOT7Q9UIV1 285 aaKnown RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 CSN2P05814 226 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 CALML3P27482 149 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 TRAPPC10P48553 1259 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 RNASE9P60153 205 aaKnown RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 TIGD7Q6NT04 549 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 HIBCHQ6NVY1 386 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 PDZD4Q76G19 769 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 SLC26A7Q8TE54 656 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 KIAA1143Q96AT1 154 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 PFDN5Q99471 154 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 TMEM60Q9H2L4 133 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 ARPP21Q9UBL0 812 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 RWDD2AQ9UIY3 292 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 C9IYK1 514 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 FAM107AO95990 144 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 FOSP01100 380 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 P4HBP07237 508 aaKnown RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 UBA1P22314 1058 aaKnown RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 GJA9P57773 515 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 ELF2Q15723 593 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 RTN1Q16799 776 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 KLHL23Q8NBE8 558 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 PLEKHA8Q96JA3 519 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 PAIP1Q9H074 479 aaKnown RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 RUBCNLQ9H714 662 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 KPNA3O00505 521 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 ENSAO43768 121 aaKnown RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 HEXIM1O94992 359 aaKnown RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 SRGAP2BP0DMP2 458 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 C15orf59Q2T9L4 293 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 LACTB2Q53H82 288 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 ARMT1Q9H993 441 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 HDAC6Q9UBN7 1215 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 KLHL3Q9UH77 587 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 RABGEF1Q9UJ41 708 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 SUPT3HB4E1H0 165 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 CSF1RP07333 972 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 CATIPQ7Z7H3 387 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 C11orf74Q86VG3 221 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 FSTL5Q8N475 847 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 DCAF11Q8TEB1 546 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 RMND5BQ96G75 393 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 DNAJC7Q99615 494 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 UBXN6Q9BZV1 441 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 TRIM2Q9C040 744 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 GGA3Q9NZ52 723 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 CCDC182A6NF36 153 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 COBLO75128 1261 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 PPP1R37O75864 691 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 BCL10O95999 233 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 OATP04181 439 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 ZNF18P17022 549 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 PPARGP37231 505 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 PIK3CBP42338 1070 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 PPP3CCP48454 512 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 RARSP54136 660 aaKnown RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 GALK2Q01415 458 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 KCTD21Q4G0X4 260 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 ZNF618Q5T7W0 954 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 NET1Q7Z628 596 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 GTPBP3Q969Y2 492 aaKnown RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 CCNL2Q96S94 520 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-202ENST00000375427 ETAA1Q9NY74 926 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 ACAD8Q9UKU7 415 aa6.33□□□□□ -1.4
SCN2A-202ENST00000375427 PPIP5K2O43314 1243 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 PTPN5P54829 565 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 EVA1CP58658 441 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 DSG1Q02413 1049 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 Q4G0T1 1027 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 RASSF3Q86WH2 238 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 CRLF3Q8IUI8 442 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 BBS7Q8IWZ6 715 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 KCNG4Q8TDN1 519 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 UBASH3BQ8TF42 649 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 TOP1MTQ969P6 601 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 KLHL28Q9NXS3 571 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 PPARGC1AQ9UBK2 798 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms