RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 TMEM206Q9H813 350 aa8.97□□□□□ -0.97
UBR4-202ENST00000375224 HOMER2Q9NSB8 354 aa8.97□□□□□ -0.97
UBR4-202ENST00000375224 TMOD4Q9NZQ9 345 aa8.97□□□□□ -0.97
UBR4-202ENST00000375224 TRIM10Q9UDY6 481 aa8.97□□□□□ -0.97
UBR4-202ENST00000375224 SAMM50Q9Y512 469 aa8.97□□□□□ -0.97
UBR4-202ENST00000375224 SFI1A8K8P3 1242 aa8.96□□□□□ -0.97
UBR4-202ENST00000375224 DDX39AO00148 427 aaKnown RBP8.96□□□□□ -0.97
UBR4-202ENST00000375224 AKAP3O75969 853 aa8.96□□□□□ -0.97
UBR4-202ENST00000375224 NMT1P30419 496 aaKnown RBP8.96□□□□□ -0.97
UBR4-202ENST00000375224 SNRPFP62306 86 aaKnown RBP8.96□□□□□ -0.97
UBR4-202ENST00000375224 ASTE1Q2TB18 679 aaPredicted RBP8.96□□□□□ -0.97
UBR4-202ENST00000375224 TCERG1LQ5VWI1 586 aa8.96□□□□□ -0.97
UBR4-202ENST00000375224 FAM186BQ8IYM0 893 aa8.96□□□□□ -0.97
UBR4-202ENST00000375224 IWS1Q96ST2 819 aa8.96□□□□□ -0.97
UBR4-202ENST00000375224 PDCD2LQ9BRP1 358 aa8.96□□□□□ -0.97
UBR4-202ENST00000375224 LACRTQ9GZZ8 138 aa8.96□□□□□ -0.97
UBR4-202ENST00000375224 GANQ9H2C0 597 aa8.96□□□□□ -0.97
UBR4-202ENST00000375224 PXMP2Q9NR77 195 aa8.96□□□□□ -0.97
UBR4-202ENST00000375224 RNF146Q9NTX7 359 aa8.96□□□□□ -0.97
UBR4-202ENST00000375224 PUF60Q9UHX1 559 aaKnown RBP8.96□□□□□ -0.97
UBR4-202ENST00000375224 SCAF8Q9UPN6 1271 aaKnown RBP8.96□□□□□ -0.97
UBR4-202ENST00000375224 WDR64B1ANS9 1081 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 TGFB1I1O43294 461 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 PLEKP08567 350 aaPredicted RBP8.96□□□□□ -0.98
UBR4-202ENST00000375224 EIF2AK2P19525 551 aaKnown RBP8.96□□□□□ -0.98
UBR4-202ENST00000375224 DSG3P32926 999 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 MRPS9P82933 396 aaKnown RBP8.96□□□□□ -0.98
UBR4-202ENST00000375224 RAPGEF1Q13905 1077 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 COG2Q14746 738 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 DCAF17Q5H9S7 520 aaPredicted RBP8.96□□□□□ -0.98
UBR4-202ENST00000375224 ANGEL2Q5VTE6 544 aaKnown RBP8.96□□□□□ -0.98
UBR4-202ENST00000375224 HGSNATQ68CP4 663 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 NAIF1Q69YI7 327 aaPredicted RBP8.96□□□□□ -0.98
UBR4-202ENST00000375224 NSMFQ6X4W1 530 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 SLC9A9Q8IVB4 645 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 C4orf19Q8IY42 314 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 SYCP3Q8IZU3 236 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 GPRASP2Q96D09 838 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 SPAG5Q96R06 1193 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 SGIP1Q9BQI5 828 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 CRACR2AQ9BSW2 395 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 MYPNQ86TC9 1320 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 ZNF263O14978 683 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 CLIC2O15247 247 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 HIP1RO75146 1068 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 ERLIN1O75477 346 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 STAM2O75886 525 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 MYCLP12524 364 aaPredicted RBP8.96□□□□□ -0.98
UBR4-202ENST00000375224 PRLRP16471 622 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 PSMC5P62195 406 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 KLHL30Q0D2K2 578 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 NOL9Q5SY16 702 aaKnown RBP8.96□□□□□ -0.98
UBR4-202ENST00000375224 MICALL1Q8N3F8 863 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 IL31RAQ8NI17 732 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 ATG4CQ96DT6 458 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 CDHR1Q96JP9 859 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 ARFGAP3Q9NP61 516 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 ANKEF1Q9NU02 776 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 ZHX2Q9Y6X8 837 aa8.96□□□□□ -0.98
UBR4-202ENST00000375224 ASTN2O75129 1339 aaPredicted RBP8.95□□□□□ -0.98
UBR4-202ENST00000375224 MACROD2A1Z1Q3 448 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 CCDC151A5D8V7 595 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 ATP2A1O14983 1001 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 SETSIPP0DME0 302 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 MCM3P25205 808 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 ITGB3BPQ13352 177 aaPredicted RBP8.95□□□□□ -0.98
UBR4-202ENST00000375224 KLHDC7AQ5VTJ3 777 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 SLC30A10Q6XR72 485 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 VPS36Q86VN1 386 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 MSANTD4Q8NCY6 345 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 TMEM174Q8WUU8 243 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 FIZ1Q96SL8 496 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 PARD6BQ9BYG5 372 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 HOXC10Q9NYD6 342 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 PKD2L1Q9P0L9 805 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 WRAP73Q9P2S5 460 aaPredicted RBP8.95□□□□□ -0.98
UBR4-202ENST00000375224 TSKSQ9UJT2 592 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 ADAMTS5Q9UNA0 930 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 PARP14Q460N5 1801 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 RCCD1A6NED2 376 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 ZBTB39O15060 712 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 SCP2P22307 547 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 PON1P27169 355 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 R3HDM1Q15032 1099 aaKnown RBP8.95□□□□□ -0.98
UBR4-202ENST00000375224 SLC18A3Q16572 532 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 ZNF746Q6NUN9 644 aaPredicted RBP8.95□□□□□ -0.98
UBR4-202ENST00000375224 GPC2Q8N158 579 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 NSUN6Q8TEA1 469 aaKnown RBP8.95□□□□□ -0.98
UBR4-202ENST00000375224 SLC35C1Q96A29 364 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 NOX5Q96PH1 765 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 ACCSQ96QU6 501 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 DMAC2Q9NW81 257 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 GPRC5DQ9NZD1 345 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 PHIPQ8WWQ0 1821 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 ZMYM2Q9UBW7 1377 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 ZNF541Q9H0D2 1346 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 ATP1A1P05023 1023 aaKnown RBP8.95□□□□□ -0.98
UBR4-202ENST00000375224 PLS3P13797 630 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 UCHL3P15374 230 aa8.95□□□□□ -0.98
UBR4-202ENST00000375224 YWHABP31946 246 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms