RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 NEDD9Q14511 834 aa18.52■□□□□ 0.56
PTPN20-203ENST00000374342 XKR3Q5GH77 459 aa18.52■□□□□ 0.56
PTPN20-203ENST00000374342 TRIM65Q6PJ69 517 aa18.52■□□□□ 0.56
PTPN20-203ENST00000374342 C2orf69Q8N8R5 385 aa18.52■□□□□ 0.56
PTPN20-203ENST00000374342 TMEM206Q9H813 350 aa18.52■□□□□ 0.56
PTPN20-203ENST00000374342 ATP6V0A4Q9HBG4 840 aa18.52■□□□□ 0.56
PTPN20-203ENST00000374342 LZTFL1Q9NQ48 299 aa18.52■□□□□ 0.56
PTPN20-203ENST00000374342 A0A0U1RQJ8 604 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 LRRC53A6NM62 1247 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 DGAT1O75907 488 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 NDUFA10O95299 355 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 ATG7O95352 703 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 OATP04181 439 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 TUBB4AP04350 444 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 LY6KQ17RY6 165 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 RRAGAQ7L523 313 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 GPRC5AQ8NFJ5 357 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 ATRIPQ8WXE1 791 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 KIFAP3Q92845 792 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 KIFC3Q9BVG8 833 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 CEP72Q9P209 647 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 DNAI1Q9UI46 699 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 FRMD4BQ9Y2L6 1034 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 SIP14410 1827 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 PHLPP2Q6ZVD8 1323 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 TISP43B9A030 160 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 SOCS7O14512 581 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 CCNA1P78396 465 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 GTF2BQ00403 316 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 APBA1Q02410 837 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 GPIHBP1Q8IV16 184 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 FBXO16Q8IX29 292 aaPredicted RBP18.51■□□□□ 0.55
PTPN20-203ENST00000374342 ANKRD13CQ8N6S4 541 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 SLC17A8Q8NDX2 589 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 MCPH1Q8NEM0 835 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 BSNDQ8WZ55 320 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 BAP1Q92560 729 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 SLC35C1Q96A29 364 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 MKNK1Q9BUB5 465 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 ST6GALNAC4Q9H4F1 302 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 NLRC4Q9NPP4 1024 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 SLC45A1Q9Y2W3 748 aa18.51■□□□□ 0.55
PTPN20-203ENST00000374342 MAFBQ9Y5Q3 323 aaPredicted RBP18.51■□□□□ 0.55
PTPN20-203ENST00000374342 EPN1Q9Y6I3 576 aaPredicted RBP18.51■□□□□ 0.55
PTPN20-203ENST00000374342 ARIH2O95376 493 aa18.5■□□□□ 0.55
PTPN20-203ENST00000374342 NPTX2P47972 431 aa18.5■□□□□ 0.55
PTPN20-203ENST00000374342 SMTNP53814 917 aa18.5■□□□□ 0.55
PTPN20-203ENST00000374342 PDXDC1Q6P996 788 aa18.5■□□□□ 0.55
PTPN20-203ENST00000374342 ANKRD23Q86SG2 305 aa18.5■□□□□ 0.55
PTPN20-203ENST00000374342 KMT5AQ9NQR1 393 aa18.5■□□□□ 0.55
PTPN20-203ENST00000374342 XPNPEP1Q9NQW7 623 aa18.5■□□□□ 0.55
PTPN20-203ENST00000374342 DMAC2Q9NW81 257 aa18.5■□□□□ 0.55
PTPN20-203ENST00000374342 GSTTP1A0A1W2PQM5 241 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 EXOC3O60645 756 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 NOL4O94818 638 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 TGFB3P10600 412 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 ATP4AP20648 1035 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 CYLC1P35663 651 aaPredicted RBP18.49■□□□□ 0.55
PTPN20-203ENST00000374342 POLGP54098 1239 aaPredicted RBP18.49■□□□□ 0.55
PTPN20-203ENST00000374342 POLR2FP61218 127 aaKnown RBP18.49■□□□□ 0.55
PTPN20-203ENST00000374342 GNG11P61952 73 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 EMC2Q15006 297 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 METTL7BQ6UX53 244 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 BORCS6Q96GS4 357 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 EDEM3Q9BZQ6 932 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 POLR3FQ9H1D9 316 aaPredicted RBP18.49■□□□□ 0.55
PTPN20-203ENST00000374342 NHEJ1Q9H9Q4 299 aaPredicted RBP18.49■□□□□ 0.55
PTPN20-203ENST00000374342 MLXIPQ9HAP2 919 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 ARHGAP29Q52LW3 1261 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 FAM160B1Q5W0V3 765 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 SPRYD7Q5W111 196 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 SLC9A9Q8IVB4 645 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 TMEM161BQ8NDZ6 487 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 PCYT2Q99447 389 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 PCIF1Q9H4Z3 704 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 PLAGL2Q9UPG8 496 aa18.49■□□□□ 0.55
PTPN20-203ENST00000374342 REXO2Q9Y3B8 237 aaKnown RBP18.49■□□□□ 0.55
PTPN20-203ENST00000374342 IGKV6D-21A0A0A0MT36 114 aa18.48■□□□□ 0.55
PTPN20-203ENST00000374342 DENND3A2RUS2 1198 aa18.48■□□□□ 0.55
PTPN20-203ENST00000374342 PLEKP08567 350 aaPredicted RBP18.48■□□□□ 0.55
PTPN20-203ENST00000374342 HNRNPH3P31942 346 aaKnown RBP18.48■□□□□ 0.55
PTPN20-203ENST00000374342 TCF7P36402 384 aaPredicted RBP18.48■□□□□ 0.55
PTPN20-203ENST00000374342 CDK17Q00537 523 aa18.48■□□□□ 0.55
PTPN20-203ENST00000374342 HVCN1Q96D96 273 aa18.48■□□□□ 0.55
PTPN20-203ENST00000374342 CBWD1Q9BRT8 395 aa18.48■□□□□ 0.55
PTPN20-203ENST00000374342 GANQ9H2C0 597 aa18.48■□□□□ 0.55
PTPN20-203ENST00000374342 NMRK2Q9NPI5 230 aa18.48■□□□□ 0.55
PTPN20-203ENST00000374342 PDLIM7Q9NR12 457 aa18.48■□□□□ 0.55
PTPN20-203ENST00000374342 DDX41Q9UJV9 622 aaKnown RBP18.48■□□□□ 0.55
PTPN20-203ENST00000374342 EXOC3L4Q17RC7 722 aa18.47■□□□□ 0.55
PTPN20-203ENST00000374342 KCNV1Q6PIU1 500 aa18.47■□□□□ 0.55
PTPN20-203ENST00000374342 SPIRE2Q8WWL2 714 aa18.47■□□□□ 0.55
PTPN20-203ENST00000374342 C17orf75Q9HAS0 396 aa18.47■□□□□ 0.55
PTPN20-203ENST00000374342 GCNT4Q9P109 453 aa18.47■□□□□ 0.55
PTPN20-203ENST00000374342 CGNQ9P2M7 1197 aaKnown RBP18.47■□□□□ 0.55
PTPN20-203ENST00000374342 TBX20Q9UMR3 447 aa18.47■□□□□ 0.55
PTPN20-203ENST00000374342 EXOC7Q9UPT5 735 aa18.47■□□□□ 0.55
PTPN20-203ENST00000374342 NOP56O00567 594 aaKnown RBP18.47■□□□□ 0.55
PTPN20-203ENST00000374342 FANCGO15287 622 aa18.47■□□□□ 0.55
PTPN20-203ENST00000374342 TRIM49P0CI25 452 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms