RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 BBS9Q3SYG4 887 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 SCN4BQ8IWT1 228 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 ZNF713Q8N859 430 aaPredicted RBP15.34■□□□□ 0.05
TRAF1-201ENST00000373887 SLC17A8Q8NDX2 589 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 RNF139Q8WU17 664 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 FAM84BQ96KN1 310 aaPredicted RBP15.34■□□□□ 0.05
TRAF1-201ENST00000373887 SLC12A6Q9UHW9 1150 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 GUCY2CP25092 1073 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 HOXD10P28358 340 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 E2F4Q16254 413 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 KPNA2P52292 529 aaKnown RBP15.33■□□□□ 0.05
TRAF1-201ENST00000373887 ANGEL2Q5VTE6 544 aaKnown RBP15.33■□□□□ 0.05
TRAF1-201ENST00000373887 GRAMD4Q6IC98 578 aa15.33■□□□□ 0.05
TRAF1-201ENST00000373887 TRIML1Q8N9V2 468 aa15.33■□□□□ 0.05
TRAF1-201ENST00000373887 GIPC2Q8TF65 315 aa15.33■□□□□ 0.05
TRAF1-201ENST00000373887 SMYD3Q9H7B4 428 aa15.33■□□□□ 0.05
TRAF1-201ENST00000373887 PGRMC1O00264 195 aaKnown RBP15.33■□□□□ 0.05
TRAF1-201ENST00000373887 TADA3O75528 432 aa15.33■□□□□ 0.05
TRAF1-201ENST00000373887 KITP10721 976 aa15.33■□□□□ 0.05
TRAF1-201ENST00000373887 ADGRF4Q8IZF3 695 aa15.33■□□□□ 0.05
TRAF1-201ENST00000373887 SNX19Q92543 992 aa15.33■□□□□ 0.05
TRAF1-201ENST00000373887 SERPINI1Q99574 410 aa15.33■□□□□ 0.05
TRAF1-201ENST00000373887 CENPKQ9BS16 269 aa15.33■□□□□ 0.05
TRAF1-201ENST00000373887 ZNF302Q9NR11 478 aa15.33■□□□□ 0.05
TRAF1-201ENST00000373887 MCF2P10911 925 aa15.33■□□□□ 0.04
TRAF1-201ENST00000373887 SKIP12755 728 aa15.33■□□□□ 0.04
TRAF1-201ENST00000373887 SCARF1Q14162 830 aa15.33■□□□□ 0.04
TRAF1-201ENST00000373887 DPCR1Q3MIW9 517 aa15.33■□□□□ 0.04
TRAF1-201ENST00000373887 TBC1D16Q8TBP0 767 aa15.33■□□□□ 0.04
TRAF1-201ENST00000373887 TRIM15Q9C019 465 aa15.33■□□□□ 0.04
TRAF1-201ENST00000373887 WARS2Q9UGM6 360 aaKnown RBP15.33■□□□□ 0.04
TRAF1-201ENST00000373887 CEP152O94986 1710 aa15.33■□□□□ 0.04
TRAF1-201ENST00000373887 SOWAHDA6NJG2 315 aa15.33■□□□□ 0.04
TRAF1-201ENST00000373887 E2F6O75461 281 aa15.33■□□□□ 0.04
TRAF1-201ENST00000373887 CCDC85BQ15834 202 aaPredicted RBP15.33■□□□□ 0.04
TRAF1-201ENST00000373887 RCSD1Q6JBY9 416 aa15.33■□□□□ 0.04
TRAF1-201ENST00000373887 RWDD4Q6NW29 188 aaKnown RBP15.33■□□□□ 0.04
TRAF1-201ENST00000373887 HACL1Q9UJ83 578 aa15.33■□□□□ 0.04
TRAF1-201ENST00000373887 HSPA8P11142 646 aaKnown RBP15.33■□□□□ 0.04
TRAF1-201ENST00000373887 MRPS25P82663 173 aaKnown RBP15.33■□□□□ 0.04
TRAF1-201ENST00000373887 ZNF658Q5TYW1 1059 aaPredicted RBP15.33■□□□□ 0.04
TRAF1-201ENST00000373887 PRR5LQ6MZQ0 368 aa15.33■□□□□ 0.04
TRAF1-201ENST00000373887 CYFIP1Q7L576 1253 aa15.33■□□□□ 0.04
TRAF1-201ENST00000373887 ST13P4Q8IZP2 240 aaPredicted RBP15.33■□□□□ 0.04
TRAF1-201ENST00000373887 RABGGTAQ92696 567 aa15.33■□□□□ 0.04
TRAF1-201ENST00000373887 MRFAP1Q9Y605 127 aa15.33■□□□□ 0.04
TRAF1-201ENST00000373887 SYCE1LA8MT33 242 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 F5H6K3 240 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 KLRC3Q07444 240 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 ZC3H18Q86VM9 953 aaKnown RBP15.32■□□□□ 0.04
TRAF1-201ENST00000373887 MARCH10Q8NA82 808 aaPredicted RBP15.32■□□□□ 0.04
TRAF1-201ENST00000373887 CDC42BPAQ5VT25 1732 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 DPEP1P16444 411 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 IFNAR1P17181 557 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 CASP1P29466 404 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 TRIM11Q96F44 468 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 DACH2Q96NX9 599 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 TRPV6Q9H1D0 765 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 UPF3AQ9H1J1 476 aaKnown RBP15.32■□□□□ 0.04
TRAF1-201ENST00000373887 ATP6V0A4Q9HBG4 840 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 SPATA31A1Q5TZJ5 1347 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 SLC16A4O15374 487 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 HSPA4LO95757 839 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 CHEK2O96017 543 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 GNAT1P11488 350 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 AKR1B1P15121 316 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 KCNA4P22459 653 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 TTLL4Q14679 1199 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 TBC1D1Q86TI0 1168 aaPredicted RBP15.32■□□□□ 0.04
TRAF1-201ENST00000373887 NEUROG2Q9H2A3 272 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 GPBP1L1Q9HC44 474 aaPredicted RBP15.32■□□□□ 0.04
TRAF1-201ENST00000373887 TSR3Q9UJK0 312 aaKnown RBP15.32■□□□□ 0.04
TRAF1-201ENST00000373887 NCAPD2Q15021 1401 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 EIF4E1BA6NMX2 242 aaKnown RBP15.32■□□□□ 0.04
TRAF1-201ENST00000373887 PRPSAP2O60256 369 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 ACSL3O95573 720 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 PYGLP06737 847 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 HIBCHQ6NVY1 386 aaPredicted RBP15.32■□□□□ 0.04
TRAF1-201ENST00000373887 COG4Q9H9E3 785 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 GABBR1Q9UBS5 961 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 ZNRF3Q9ULT6 936 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 PTCH1Q13635 1447 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 A0A0G2JND7 137 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 H0Y3Z8 333 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 TAF1CQ15572 869 aaPredicted RBP15.32■□□□□ 0.04
TRAF1-201ENST00000373887 FRA10AC1Q70Z53 315 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 CLEC10AQ8IUN9 316 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 NSUN6Q8TEA1 469 aaKnown RBP15.32■□□□□ 0.04
TRAF1-201ENST00000373887 SPTLC3Q9NUV7 552 aa15.32■□□□□ 0.04
TRAF1-201ENST00000373887 ATP8B3O60423 1300 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 FOXO4P98177 505 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 C11orf57Q6ZUT1 292 aaPredicted RBP15.31■□□□□ 0.04
TRAF1-201ENST00000373887 OXER1Q8TDS5 423 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 TEX2Q8IWB9 1127 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 ENAHQ8N8S7 591 aaPredicted RBP15.31■□□□□ 0.04
TRAF1-201ENST00000373887 CUEDC2Q9H467 287 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 GGA3Q9NZ52 723 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 CCDC195A0A1B0GUA6 201 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 PSMD14O00487 310 aa15.31■□□□□ 0.04
TRAF1-201ENST00000373887 KLC3Q6P597 504 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms