RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 SNX1Q13596 522 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 EPHA7Q15375 998 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 STILQ15468 1287 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 ALS2CLQ60I27 953 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 DCLK2Q8N568 766 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 TRIM15Q9C019 465 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 FGFR1OP2Q9NVK5 253 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 DTNBO60941 627 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 INPP1P49441 399 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 ZSCAN26Q16670 478 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 RSBN1LQ6PCB5 846 aaPredicted RBP11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 SFR1Q86XK3 245 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 IFT43Q96FT9 208 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 C6orf118Q5T5N4 469 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 TNIP3Q96KP6 325 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 SPATA33Q96N06 139 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 FMO2Q99518 471 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 EDEM3Q9BZQ6 932 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 CNOT8Q9UFF9 292 aaKnown RBP11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 ATP8A1Q9Y2Q0 1164 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 PCDHA10Q9Y5I2 948 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 ZNF521Q96K83 1311 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 PLA2R1Q13018 1463 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 ENTPD3O75355 529 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 MOCS3O95396 460 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 RALAP11233 206 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 ZFXP17010 805 aaPredicted RBP11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 GPC5P78333 572 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 STRIP1Q5VSL9 837 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 CELF1Q92879 486 aaKnown RBP11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 EEF2KMTQ96G04 330 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 OTUD5Q96G74 571 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 PPP1R16BQ96T49 567 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 PARK7Q99497 189 aaKnown RBP11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 FSD1LQ9BXM9 530 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 BCL2L12Q9HB09 334 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 BARHL2Q9NY43 387 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 PREX2Q70Z35 1606 aa11.87□□□□□ -0.51
PHACTR4-202ENST00000373839 CCDC151A5D8V7 595 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 IGKV5-2P06315 115 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 FBXL13Q8NEE6 735 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 CEP95Q96GE4 821 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 TXLNGQ9NUQ3 528 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 KPNA7A9QM74 516 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 TAF11Q15544 211 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 EFHC2Q5JST6 749 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 PGBD4Q96DM1 585 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 PACSIN2Q9UNF0 486 aaPredicted RBP11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 NEMP1O14524 444 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 RAET1EQ8TD07 263 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 FAF2Q96CS3 445 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 UPF3AQ9H1J1 476 aaKnown RBP11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 SUCLA2Q9P2R7 463 aaPredicted RBP11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 GABBR1Q9UBS5 961 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 USP31Q70CQ4 1352 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 CCT5P48643 541 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 QRICH1Q2TAL8 776 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 NAALADL2Q58DX5 795 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 EMBQ6PCB8 327 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 FRA10AC1Q70Z53 315 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 GINM1Q9NU53 330 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 DDX56Q9NY93 547 aaKnown RBP11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 CAPN7Q9Y6W3 813 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 PRDM15P57071 1507 aaPredicted RBP11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 KDM6AO15550 1401 aaPredicted RBP11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 ZBTB7AO95365 584 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 CACNB3P54284 484 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 KRT31Q15323 416 aa11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 PDCD2Q16342 344 aaPredicted RBP11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 KNOP1Q1ED39 458 aaKnown RBP11.86□□□□□ -0.51
PHACTR4-202ENST00000373839 GOLGA8MH3BSY2 632 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 BNIP3LO60238 219 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 FTCDO95954 541 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 PHEXP78562 749 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 SPDL1Q96EA4 605 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 DDX27Q96GQ7 796 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 DYDC2Q96IM9 177 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 PLA2G12BQ9BX93 195 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 PFASO15067 1338 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 TET3O43151 1660 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 ANO9A1A5B4 782 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 LGALS16A8MUM7 142 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 AP3B1O00203 1094 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 STK25O00506 426 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 SCP2P22307 547 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 CDC25AP30304 524 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 COG2Q14746 738 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 KLHL38Q2WGJ6 581 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 CDKL3Q8IVW4 592 aaPredicted RBP11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 KCTD17Q8N5Z5 321 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 PIGOQ8TEQ8 1089 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 PPWD1Q96BP3 646 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 TUFT1Q9NNX1 390 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 SAMSN1Q9NSI8 373 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 CFAP65Q6ZU64 1925 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 FAM170AA1A519 330 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 SNX2O60749 519 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 TOM1L1O75674 476 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms