RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 GABPB1Q06547 395 aaPredicted RBP9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 KLHL30Q0D2K2 578 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 KCNMA1Q12791 1236 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 MTF1Q14872 753 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 TCEAL1Q15170 157 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 ASIC2Q16515 512 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 ERCC6LQ2NKX8 1250 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 KIAA1755Q5JYT7 1200 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 KLHDC7AQ5VTJ3 777 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 PADI6Q6TGC4 694 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 ENOSF1Q7L5Y1 443 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 DEFB132Q7Z7B7 95 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 FAM186BQ8IYM0 893 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 SLC35F6Q8N357 371 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 PROCA1Q8NCQ7 364 aaPredicted RBP9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 DHX38Q92620 1227 aaKnown RBP9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 KLRG1Q96E93 195 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 BORCS6Q96GS4 357 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 MOV10L1Q9BXT6 1211 aaKnown RBP9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 STK33Q9BYT3 514 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 UNC45AQ9H3U1 944 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 ZHX3Q9H4I2 956 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 RPAP3Q9H6T3 665 aaPredicted RBP9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 VIPAS39Q9H9C1 493 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 FAM53CQ9NYF3 392 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 ARHGAP20Q9P2F6 1191 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 GUCA1BQ9UMX6 200 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 ZHX2Q9Y6X8 837 aa9.53□□□□□ -0.88
SNRNP40-202ENST00000373720 RBBP6Q7Z6E9 1792 aaKnown RBP9.52□□□□□ -0.88
SNRNP40-202ENST00000373720 RNF225M0QZC1 329 aaPredicted RBP9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 CXCL11O14625 94 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 ZC3H11AO75152 810 aaKnown RBP eCLIP9.52□□□□□ -0.892e-6■■■■□ 21.1
SNRNP40-202ENST00000373720 SLC25A27O95847 323 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 ARP10275 920 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 UCHL3P15374 230 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 YWHABP31946 246 aaKnown RBP9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 EIF4A3P38919 411 aaKnown RBP9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 RARRES1P49788 294 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 PSMC6P62333 389 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 CYP4A11Q02928 519 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 SPP2Q13103 211 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 MTMR2Q13614 643 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 DOCK1Q14185 1865 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 LRRC41Q15345 812 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 ELF2Q15723 593 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 NAB2Q15742 525 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 BRDTQ58F21 947 aaPredicted RBP9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 HGSNATQ68CP4 663 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 SYCP3Q8IZU3 236 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 ACRBPQ8NEB7 543 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 MORC4Q8TE76 937 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 SLC35C1Q96A29 364 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 AGBL1Q96MI9 1066 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 AGPAT3Q9NRZ7 376 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 ADARB2Q9NS39 739 aaKnown RBP9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 RNF146Q9NTX7 359 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 RGL1Q9NZL6 768 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 SNX12Q9UMY4 172 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 BCS1LQ9Y276 419 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 REXO2Q9Y3B8 237 aaKnown RBP9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 HYOU1Q9Y4L1 999 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 ASTN1O14525 1302 aa9.52□□□□□ -0.89
SNRNP40-202ENST00000373720 A6NNZ2 444 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 TGFB1I1O43294 461 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 AKAP3O75969 853 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 ZRANB2O95218 330 aaKnown RBP eCLIP9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 LDHAP00338 332 aaKnown RBP9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 NR3C2P08235 984 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 GARTP22102 1010 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 PON1P27169 355 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 NF2P35240 595 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 IREB2P48200 963 aaKnown RBP9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 NCKAP1LP55160 1127 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 POLR2FP61218 127 aaKnown RBP9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 HERVK_113P62684 666 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 PPATQ06203 517 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 GOLGA8FQ08AF8 430 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 GOLGA8DPQ0D2H9 430 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 BFSP1Q12934 665 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 CTTNQ14247 550 aaKnown RBP9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 STXBP2Q15833 593 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 TUBB8Q3ZCM7 444 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 CFAP221Q4G0U5 840 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 XKR3Q5GH77 459 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 TEX35Q5T0J7 233 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 MIS18BP1Q6P0N0 1132 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 HDXQ7Z353 690 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 NELFCDQ8IXH7 590 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 MMGT1Q8N4V1 131 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 XXYLT1Q8NBI6 393 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 REPS2Q8NFH8 660 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 CYP2W1Q8TAV3 490 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 TMC2Q8TDI7 906 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 PBKQ96KB5 322 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 WRNIP1Q96S55 665 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 JPH2Q9BR39 696 aaPredicted RBP9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 RUSC1Q9BVN2 902 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 LSM14BQ9BX40 385 aaKnown RBP9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 GANQ9H2C0 597 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms