RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 KRIT1O00522 736 aa8.14□□□□□ -1.11
GARNL3-202ENST00000373387 C21orf2O43822 256 aa8.14□□□□□ -1.11
GARNL3-202ENST00000373387 EVI5O60447 810 aa8.14□□□□□ -1.11
GARNL3-202ENST00000373387 SOX5P35711 763 aa8.14□□□□□ -1.11
GARNL3-202ENST00000373387 VPS72Q15906 364 aa8.14□□□□□ -1.11
GARNL3-202ENST00000373387 KCTD1Q719H9 257 aa8.14□□□□□ -1.11
GARNL3-202ENST00000373387 PIGWQ7Z7B1 504 aa8.14□□□□□ -1.11
GARNL3-202ENST00000373387 DCAF4Q8WV16 495 aa8.14□□□□□ -1.11
GARNL3-202ENST00000373387 STK33Q9BYT3 514 aa8.14□□□□□ -1.11
GARNL3-202ENST00000373387 SLC40A1Q9NP59 571 aa8.14□□□□□ -1.11
GARNL3-202ENST00000373387 GCNT4Q9P109 453 aa8.14□□□□□ -1.11
GARNL3-202ENST00000373387 SIP14410 1827 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 KIAA0391O15091 583 aaKnown RBP8.13□□□□□ -1.11
GARNL3-202ENST00000373387 MSH4O15457 936 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 PPIP5K2O43314 1243 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 DNAJC8O75937 253 aaPredicted RBP8.13□□□□□ -1.11
GARNL3-202ENST00000373387 EYA4O95677 639 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 CTNNA2P26232 953 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 DNA2P51530 1060 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 EIF6P56537 245 aaKnown RBP8.13□□□□□ -1.11
GARNL3-202ENST00000373387 APOBEC3HQ6NTF7 200 aaKnown RBP8.13□□□□□ -1.11
GARNL3-202ENST00000373387 B3GNT9Q6UX72 402 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 C1orf186Q6ZWK4 172 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 PEX26Q7Z412 305 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 MAATS1Q7Z4T9 603 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 CNBD1Q8NA66 436 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 SLC35G2Q8TBE7 412 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 CD101Q93033 1021 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 RNF25Q96BH1 459 aaPredicted RBP8.13□□□□□ -1.11
GARNL3-202ENST00000373387 ARHGEF26Q96DR7 871 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 FAM20AQ96MK3 541 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 FAM129AQ9BZQ8 928 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 IKZF4Q9H2S9 585 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 KDM4CQ9H3R0 1056 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 STK24Q9Y6E0 443 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 COL2A1P02458 1487 aaPredicted RBP8.13□□□□□ -1.11
GARNL3-202ENST00000373387 PIK3CDO00329 1044 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 EML1O00423 815 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 MTA2O94776 668 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 TRIM37O94972 964 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 OAS1P00973 400 aaKnown RBP8.13□□□□□ -1.11
GARNL3-202ENST00000373387 EIF3BP55884 814 aaKnown RBP8.13□□□□□ -1.11
GARNL3-202ENST00000373387 CYP1B1Q16678 543 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 KCTD19Q17RG1 926 aaPredicted RBP8.13□□□□□ -1.11
GARNL3-202ENST00000373387 PREPLQ4J6C6 727 aaPredicted RBP8.13□□□□□ -1.11
GARNL3-202ENST00000373387 UBAP2Q5T6F2 1119 aaKnown RBP8.13□□□□□ -1.11
GARNL3-202ENST00000373387 RINT1Q6NUQ1 792 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 TATDN1Q6P1N9 297 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 PALB2Q86YC2 1186 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 FUKQ8N0W3 1084 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 LMBR1Q8WVP7 490 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 ALG3Q92685 438 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 P3H4Q92791 437 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 PSMD1Q99460 953 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 KLC4Q9NSK0 619 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 NYAP2Q9P242 653 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 MGRN1O60291 552 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 SHBGP04278 402 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 SIX1Q15475 284 aaPredicted RBP8.13□□□□□ -1.11
GARNL3-202ENST00000373387 SHROOM1Q2M3G4 852 aaPredicted RBP8.13□□□□□ -1.11
GARNL3-202ENST00000373387 CBWD6Q4V339 395 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 CBWD3Q5JTY5 395 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 CBWD5Q5RIA9 395 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 CDC42EP5Q6NZY7 148 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 PLCD3Q8N3E9 789 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 CRAMP1Q96RY5 1269 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 JPH2Q9BR39 696 aaPredicted RBP8.13□□□□□ -1.11
GARNL3-202ENST00000373387 ERP44Q9BS26 406 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 TACO1Q9BSH4 297 aaKnown RBP8.13□□□□□ -1.11
GARNL3-202ENST00000373387 TRIM51Q9BSJ1 452 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 PCYOX1Q9UHG3 505 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 SLC12A4Q9UP95 1085 aa8.13□□□□□ -1.11
GARNL3-202ENST00000373387 FAM187AA6NFU0 413 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 SLURP2P0DP57 97 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 PEX5P50542 639 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 IFT88Q13099 833 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 PABPC4Q13310 644 aaKnown RBP eCLIP8.12□□□□□ -1.11
GARNL3-202ENST00000373387 C11orf63Q6NUN7 778 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 HHIPL2Q6UWX4 724 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 BTNL9Q6UXG8 535 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 SLC9A9Q8IVB4 645 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 GMCL1P1Q8NEA9 526 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 SPAG5Q96R06 1193 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 CNOT10Q9H9A5 744 aaKnown RBP8.12□□□□□ -1.11
GARNL3-202ENST00000373387 TAS2R14Q9NYV8 317 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 CNOT7Q9UIV1 285 aaKnown RBP8.12□□□□□ -1.11
GARNL3-202ENST00000373387 MCM8Q9UJA3 840 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 CCNL1Q9UK58 526 aaPredicted RBP8.12□□□□□ -1.11
GARNL3-202ENST00000373387 NOVA2Q9UNW9 492 aaKnown RBP8.12□□□□□ -1.11
GARNL3-202ENST00000373387 PARP14Q460N5 1801 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 CAND2O75155 1236 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 BBOX1O75936 387 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 HPDP32754 393 aaPredicted RBP8.12□□□□□ -1.11
GARNL3-202ENST00000373387 USP8P40818 1118 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 FMO5P49326 533 aa8.12□□□□□ -1.11
GARNL3-202ENST00000373387 MAGOHP61326 146 aaKnown RBP8.12□□□□□ -1.11
GARNL3-202ENST00000373387 DHX34Q14147 1143 aaKnown RBP8.12□□□□□ -1.11
GARNL3-202ENST00000373387 CTTNQ14247 550 aaKnown RBP8.12□□□□□ -1.11
GARNL3-202ENST00000373387 FAM98CQ17RN3 349 aaKnown RBP8.12□□□□□ -1.11
GARNL3-202ENST00000373387 DAAM2Q86T65 1068 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms