RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 C10orf62Q5T681 223 aaPredicted RBP8.9□□□□□ -0.98
GARNL3-201ENST00000373386 TTC39BQ5VTQ0 682 aaPredicted RBP8.9□□□□□ -0.98
GARNL3-201ENST00000373386 PAF1Q8N7H5 531 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 NOA1Q8NC60 698 aaKnown RBP8.9□□□□□ -0.98
GARNL3-201ENST00000373386 ZNF653Q96CK0 615 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 CCT7Q99832 543 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 GAKO14976 1311 aa8.9□□□□□ -0.99
GARNL3-201ENST00000373386 FLT1P17948 1338 aa8.9□□□□□ -0.99
GARNL3-201ENST00000373386 AFF2P51816 1311 aa8.9□□□□□ -0.99
GARNL3-201ENST00000373386 SMIM22K7EJ46 135 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 PSMA7O14818 248 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 KCNQ2O43526 872 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 KLRK1P26718 216 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 PABPC1LQ4VXU2 614 aaKnown RBP8.89□□□□□ -0.99
GARNL3-201ENST00000373386 FAM47AQ5JRC9 791 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 DPH6Q7L8W6 267 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 TMC4Q7Z404 712 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 ZSCAN29Q8IWY8 852 aaPredicted RBP8.89□□□□□ -0.99
GARNL3-201ENST00000373386 MB21D1Q8N884 522 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 RUBCNQ92622 972 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 OPTNQ96CV9 577 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 RTFDC1Q9BY42 306 aaPredicted RBP8.89□□□□□ -0.99
GARNL3-201ENST00000373386 UBE2OQ9C0C9 1292 aaKnown RBP8.89□□□□□ -0.99
GARNL3-201ENST00000373386 HESX1Q9UBX0 185 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 USP21Q9UK80 565 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 GTF3C4Q9UKN8 822 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 R3HDM2Q9Y2K5 976 aaKnown RBP8.89□□□□□ -0.99
GARNL3-201ENST00000373386 RTCBQ9Y3I0 505 aaKnown RBP8.89□□□□□ -0.99
GARNL3-201ENST00000373386 FAM205AQ6ZU69 1335 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 LRRIQ3A6PVS8 624 aaPredicted RBP8.89□□□□□ -0.99
GARNL3-201ENST00000373386 PPP1R12BO60237 982 aaPredicted RBP8.89□□□□□ -0.99
GARNL3-201ENST00000373386 NMT2O60551 498 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 PRCPP42785 496 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 KRT83P78385 493 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 UBXN1Q04323 297 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 CRY2Q49AN0 593 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 NCAPH2Q6IBW4 605 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 IRF2BP1Q8IU81 584 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 SMC1BQ8NDV3 1235 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 DEPTORQ8TB45 409 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 HELQQ8TDG4 1101 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 ABHD8Q96I13 439 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 GUCA1BQ9UMX6 200 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 SH3GLB1Q9Y371 365 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 DAAM1Q9Y4D1 1078 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 UBR3Q6ZT12 1888 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 TEX28O15482 410 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 TSPY3P0CV98 308 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 TSPY8P0CW00 308 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 SRGNP10124 158 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 RASA1P20936 1047 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 ATP2B4P23634 1241 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 TBX4P57082 545 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 PDAP1Q13442 181 aaKnown RBP8.89□□□□□ -0.99
GARNL3-201ENST00000373386 FAM98CQ17RN3 349 aaKnown RBP8.89□□□□□ -0.99
GARNL3-201ENST00000373386 IRGCQ6NXR0 463 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 TTI2Q6NXR4 508 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 DAAM2Q86T65 1068 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 BRSK2Q8IWQ3 736 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 ZNF444Q8N0Y2 327 aaPredicted RBP8.89□□□□□ -0.99
GARNL3-201ENST00000373386 RNF10Q8N5U6 811 aaKnown RBP8.89□□□□□ -0.99
GARNL3-201ENST00000373386 SYT2Q8N9I0 419 aaPredicted RBP8.89□□□□□ -0.99
GARNL3-201ENST00000373386 GDAP1Q8TB36 358 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 AFAP1L1Q8TED9 768 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 MAIP1Q8WWC4 291 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 ZNF75CPQ92670 426 aaPredicted RBP8.89□□□□□ -0.99
GARNL3-201ENST00000373386 TTYH3Q9C0H2 523 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 BLZF1Q9H2G9 400 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 VCPKMTQ9H867 229 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 FAM204AQ9H8W3 233 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 PREBQ9HCU5 417 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 C6orf50Q9HD87 102 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 TCF7L2Q9NQB0 619 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 STK17AQ9UEE5 414 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 CIDEBQ9UHD4 219 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 EFR3BQ9Y2G0 817 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 SAR1BQ9Y6B6 198 aa8.89□□□□□ -0.99
GARNL3-201ENST00000373386 ABLIM1O14639 778 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 TFRCP02786 760 aaKnown RBP8.88□□□□□ -0.99
GARNL3-201ENST00000373386 OR52Z1P0C646 297 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 CYP2D6P10635 497 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 CDC25AP30304 524 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 HNRNPH3P31942 346 aaKnown RBP8.88□□□□□ -0.99
GARNL3-201ENST00000373386 SLC16A2P36021 539 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 UBA7P41226 1012 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 TUFMP49411 452 aaKnown RBP8.88□□□□□ -0.99
GARNL3-201ENST00000373386 PEX5P50542 639 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 PTPROQ16827 1216 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 PAPD7Q5XG87 772 aaKnown RBP8.88□□□□□ -0.99
GARNL3-201ENST00000373386 TRIM50Q86XT4 487 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 C8orf48Q96LL4 319 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 TMEM47Q9BQJ4 181 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 ZCWPW1Q9H0M4 648 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 VPS33BQ9H267 617 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 MKNK2Q9HBH9 465 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 ZNF148Q9UQR1 794 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 REXO2Q9Y3B8 237 aaKnown RBP8.88□□□□□ -0.99
GARNL3-201ENST00000373386 ATAD5Q96QE3 1844 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 PVALEFA0A1B0GWK0 134 aa8.88□□□□□ -0.99
GARNL3-201ENST00000373386 TRIM43BA6NCK2 446 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms