RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 WDR17Q8IZU2 1322 aa25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 ATP1A1P05023 1023 aaKnown RBP25.61■■□□□ 1.69
RAPGEF1-203ENST00000372195 RHOT2Q8IXI1 618 aa25.61■■□□□ 1.69
RAPGEF1-203ENST00000372195 FAM81BQ96LP2 452 aa25.61■■□□□ 1.69
RAPGEF1-203ENST00000372195 NCAPGQ9BPX3 1015 aa25.61■■□□□ 1.69
RAPGEF1-203ENST00000372195 EMBQ6PCB8 327 aa25.61■■□□□ 1.69
RAPGEF1-203ENST00000372195 RNF139Q8WU17 664 aa25.61■■□□□ 1.69
RAPGEF1-203ENST00000372195 C11orf70Q9BRQ4 267 aa25.61■■□□□ 1.69
RAPGEF1-203ENST00000372195 SYCP2LQ5T4T6 812 aa25.61■■□□□ 1.69
RAPGEF1-203ENST00000372195 SPDYE1Q8NFV5 336 aaPredicted RBP25.61■■□□□ 1.69
RAPGEF1-203ENST00000372195 MYL3P08590 195 aa25.61■■□□□ 1.69
RAPGEF1-203ENST00000372195 SAAL1Q96ER3 474 aa25.61■■□□□ 1.69
RAPGEF1-203ENST00000372195 CEP170Q5SW79 1584 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 ERVV-1B6SEH8 477 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 CCNA1P78396 465 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 CREB3O43889 395 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 SKIP12755 728 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 PRELPP51888 382 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 SPARCL1Q14515 664 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 HPS3Q969F9 1004 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 ERBB3P21860 1342 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 ZNF185O15231 689 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 TTI1O43156 1089 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 ESRRGP62508 458 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 GPC5P78333 572 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 TTC30BQ8N4P2 665 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 GYG2O15488 501 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 GUCY1A2P33402 732 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 RGS9BPQ6ZS82 235 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 TMC4Q7Z404 712 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 ZFP69BQ9UJL9 534 aa25.6■■□□□ 1.69
RAPGEF1-203ENST00000372195 ZBTB5O15062 677 aa25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 KIAA1841Q6NSI8 718 aa25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 CEP95Q96GE4 821 aa25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 FAM167BQ9BTA0 163 aa25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 BRIP1Q9BX63 1249 aa25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 GGT7Q9UJ14 662 aa25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 FBXL13Q8NEE6 735 aa25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 VPS11Q9H270 941 aa25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 ATF5Q9Y2D1 282 aaPredicted RBP25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 ANXA13P27216 316 aa25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 CRKP46108 304 aa25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 NOP14P78316 857 aaKnown RBP25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 PADI6Q6TGC4 694 aa25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 TADA2BQ86TJ2 420 aa25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 EFHD1Q9BUP0 239 aa25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 ADAM33Q9BZ11 813 aa25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 MAGEA9P43362 315 aa25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 ZNF564Q8TBZ8 553 aaPredicted RBP25.59■■□□□ 1.69
RAPGEF1-203ENST00000372195 ARMC9Q7Z3E5 817 aa25.58■■□□□ 1.69
RAPGEF1-203ENST00000372195 YIPF3Q9GZM5 350 aa25.58■■□□□ 1.69
RAPGEF1-203ENST00000372195 SCINQ9Y6U3 715 aa25.58■■□□□ 1.69
RAPGEF1-203ENST00000372195 GTSE1Q9NYZ3 720 aa25.58■■□□□ 1.69
RAPGEF1-203ENST00000372195 PIK3R2O00459 728 aa25.58■■□□□ 1.69
RAPGEF1-203ENST00000372195 SHC4Q6S5L8 630 aa25.58■■□□□ 1.69
RAPGEF1-203ENST00000372195 MB21D2Q8IYB1 491 aaPredicted RBP25.58■■□□□ 1.69
RAPGEF1-203ENST00000372195 CDHR1Q96JP9 859 aa25.58■■□□□ 1.69
RAPGEF1-203ENST00000372195 TUBB6Q9BUF5 446 aa25.58■■□□□ 1.69
RAPGEF1-203ENST00000372195 TDRD3Q9H7E2 651 aaKnown RBP25.58■■□□□ 1.69
RAPGEF1-203ENST00000372195 IRAK4Q9NWZ3 460 aa25.58■■□□□ 1.69
RAPGEF1-203ENST00000372195 PODXLO00592 558 aa25.58■■□□□ 1.69
RAPGEF1-203ENST00000372195 C21orf2O43822 256 aa25.58■■□□□ 1.69
RAPGEF1-203ENST00000372195 CEP70Q8NHQ1 597 aa25.58■■□□□ 1.69
RAPGEF1-203ENST00000372195 TTC26A0AVF1 554 aa25.58■■□□□ 1.68
RAPGEF1-203ENST00000372195 EEF1DP29692 281 aaKnown RBP25.58■■□□□ 1.68
RAPGEF1-203ENST00000372195 CDR2Q01850 454 aa25.58■■□□□ 1.68
RAPGEF1-203ENST00000372195 C1orf54Q8WWF1 131 aa25.58■■□□□ 1.68
RAPGEF1-203ENST00000372195 INTS2Q9H0H0 1204 aaKnown RBP25.58■■□□□ 1.68
RAPGEF1-203ENST00000372195 KLHL8Q9P2G9 620 aaPredicted RBP25.58■■□□□ 1.68
RAPGEF1-203ENST00000372195 ERFP50548 548 aa25.57■■□□□ 1.68
RAPGEF1-203ENST00000372195 DPF2Q92785 391 aa25.57■■□□□ 1.68
RAPGEF1-203ENST00000372195 KLC2Q9H0B6 622 aa25.57■■□□□ 1.68
RAPGEF1-203ENST00000372195 ZDHHC9Q9Y397 364 aa25.57■■□□□ 1.68
RAPGEF1-203ENST00000372195 ARL4CP56559 192 aa25.57■■□□□ 1.68
RAPGEF1-203ENST00000372195 MS4A14Q96JA4 679 aa25.57■■□□□ 1.68
RAPGEF1-203ENST00000372195 TBC1D9BQ66K14 1250 aa25.57■■□□□ 1.68
RAPGEF1-203ENST00000372195 SLC13A1Q9BZW2 595 aa25.57■■□□□ 1.68
RAPGEF1-203ENST00000372195 DRAP1Q14919 205 aaPredicted RBP25.57■■□□□ 1.68
RAPGEF1-203ENST00000372195 ZNF667Q5HYK9 610 aa25.57■■□□□ 1.68
RAPGEF1-203ENST00000372195 ECT2Q9H8V3 914 aa25.57■■□□□ 1.68
RAPGEF1-203ENST00000372195 SETD1BQ9UPS6 1966 aaKnown RBP25.57■■□□□ 1.68
RAPGEF1-203ENST00000372195 PDCD2Q16342 344 aaPredicted RBP25.57■■□□□ 1.68
RAPGEF1-203ENST00000372195 ZNF699Q32M78 642 aa25.57■■□□□ 1.68
RAPGEF1-203ENST00000372195 TSC22D3Q99576 134 aa25.57■■□□□ 1.68
RAPGEF1-203ENST00000372195 ARHGEF5Q12774 1597 aa25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 TDP2O95551 362 aa25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 KLC3Q6P597 504 aa25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 FAM160B2Q86V87 743 aa25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 SERPINI1Q99574 410 aa25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 ATP6V0A4Q9HBG4 840 aa25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 PDCD6IPQ8WUM4 868 aaKnown RBP25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 MTRQ99707 1265 aa25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 TRIM55Q9BYV6 548 aa25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 KLHL11Q9NVR0 708 aa25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 MINPP1Q9UNW1 487 aa25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 ALG13Q9NP73 1137 aaKnown RBP25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 SUCLA2Q9P2R7 463 aaPredicted RBP25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 FTLP02792 175 aaPredicted RBP25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 KPNA2P52292 529 aaKnown RBP25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 TRIML2Q8N7C3 387 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms