RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 TNPO2O14787 897 aaKnown RBP4.88□□□□□ -1.63
CDR1-201ENST00000370532 GPAA1O43292 621 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 TIMM44O43615 452 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 STRNO43815 780 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 SUPT3HO75486 399 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 LDHAP00338 332 aaKnown RBP4.88□□□□□ -1.63
CDR1-201ENST00000370532 FAM200BP0CF97 657 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 RGS2P41220 211 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 OXCT1P55809 520 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 USP46P62068 366 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 USP17L24Q0WX57 530 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 BYSLQ13895 437 aaKnown RBP4.88□□□□□ -1.63
CDR1-201ENST00000370532 PTGISQ16647 500 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 KIAA0753Q2KHM9 967 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 SPECC1Q5M775 1068 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 ZNF362Q5T0B9 420 aaPredicted RBP4.88□□□□□ -1.63
CDR1-201ENST00000370532 NCAPH2Q6IBW4 605 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 KANK3Q6NY19 840 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 BLOC1S3Q6QNY0 202 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 CRELD2Q6UXH1 353 aaPredicted RBP4.88□□□□□ -1.63
CDR1-201ENST00000370532 PACS1Q6VY07 963 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 NECAB2Q7Z6G3 386 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 RNF168Q8IYW5 571 aaPredicted RBP4.88□□□□□ -1.63
CDR1-201ENST00000370532 SAMD3Q8N6K7 520 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 WHAMMQ8TF30 809 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 LPAR1Q92633 364 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 STRBPQ96SI9 672 aaKnown RBP4.88□□□□□ -1.63
CDR1-201ENST00000370532 HINFPQ9BQA5 517 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 SELENOOQ9BVL4 669 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 LZTFL1Q9NQ48 299 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 FANCLQ9NW38 375 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 NOP53Q9NZM5 478 aaKnown RBP4.88□□□□□ -1.63
CDR1-201ENST00000370532 GJD2Q9UKL4 321 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 PNMA2Q9UL42 364 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 DIS3Q9Y2L1 958 aaKnown RBP4.88□□□□□ -1.63
CDR1-201ENST00000370532 TIMM22Q9Y584 194 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 RBM8AQ9Y5S9 174 aaKnown RBP4.88□□□□□ -1.63
CDR1-201ENST00000370532 RLFQ13129 1914 aa4.88□□□□□ -1.63
CDR1-201ENST00000370532 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.87□□□□□ -1.63
CDR1-201ENST00000370532 LRRD1A4D1F6 860 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 CTAGE15A4D2H0 777 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 DDTLA6NHG4 134 aaPredicted RBP4.87□□□□□ -1.63
CDR1-201ENST00000370532 USP17L10C9JJH3 530 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 ARHGAP6O43182 974 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 FGAP02671 866 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 SPATA31D3P0C874 917 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 CTAGE8P0CG41 777 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 ZKSCAN1P17029 563 aaPredicted RBP4.87□□□□□ -1.63
CDR1-201ENST00000370532 HOXD12P35452 270 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 FLT3P36888 993 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 PHEXP78562 749 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 MMRN1Q13201 1228 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 DYNC1I2Q13409 638 aaKnown RBP4.87□□□□□ -1.63
CDR1-201ENST00000370532 DIXDC1Q155Q3 683 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 P3H1Q32P28 736 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 DPCR1Q3MIW9 517 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 MORN1Q5T089 497 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 PPP2R2DQ66LE6 453 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 KCTD16Q68DU8 428 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 TRIM68Q6AZZ1 485 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 SPATA31D4Q6ZUB0 917 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 CTAGE6Q86UF2 777 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 CTAGE4Q8IX94 777 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 CCDC65Q8IXS2 484 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 MYOCDQ8IZQ8 938 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 MIGA1Q8NAN2 632 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 GPRC5AQ8NFJ5 357 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 ZNF384Q8TF68 577 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 U2AF1L4Q8WU68 220 aaKnown RBP4.87□□□□□ -1.63
CDR1-201ENST00000370532 CYFIP2Q96F07 1278 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 ZFRQ96KR1 1074 aaKnown RBP4.87□□□□□ -1.63
CDR1-201ENST00000370532 APBA2Q99767 749 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 NUDT12Q9BQG2 462 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 POLR3CQ9BUI4 534 aaPredicted RBP4.87□□□□□ -1.63
CDR1-201ENST00000370532 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.87□□□□□ -1.63
CDR1-201ENST00000370532 RETREG1Q9H6L5 497 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 MKS1Q9NXB0 559 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 RABGEF1Q9UJ41 708 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 ZBTB21Q9ULJ3 1066 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 EFR3BQ9Y2G0 817 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 FLT1P17948 1338 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 ATP9BO43861 1147 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 KIF5CO60282 957 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 DNAJC8O75937 253 aaPredicted RBP4.87□□□□□ -1.63
CDR1-201ENST00000370532 PENKP01210 267 aaPredicted RBP4.87□□□□□ -1.63
CDR1-201ENST00000370532 CFHP08603 1231 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 GNAT2P19087 354 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 FANCCQ00597 558 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 PTK7Q13308 1070 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 SLMAPQ14BN4 828 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 NCAPHQ15003 741 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 PPP1R7Q15435 360 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 CLPPQ16740 277 aaPredicted RBP4.87□□□□□ -1.63
CDR1-201ENST00000370532 LRIT3Q3SXY7 679 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 ANKRD20A2Q5SQ80 823 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 ANKRD20A1Q5TYW2 823 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 ANKRD20A3Q5VUR7 823 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 CREB3L3Q68CJ9 461 aa4.87□□□□□ -1.63
CDR1-201ENST00000370532 DUS1LQ6P1R4 473 aaKnown RBP4.87□□□□□ -1.63
CDR1-201ENST00000370532 GADL1Q6ZQY3 521 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms