RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 NFX1Q12986 1120 aaKnown RBP23■■□□□ 1.27
SMNDC1-201ENST00000369592 CTTNQ14247 550 aaKnown RBP23■■□□□ 1.27
SMNDC1-201ENST00000369592 ODR4Q5SWX8 454 aa23■■□□□ 1.27
SMNDC1-201ENST00000369592 NPAS4Q8IUM7 802 aa23■■□□□ 1.27
SMNDC1-201ENST00000369592 C17orf80Q9BSJ5 609 aa23■■□□□ 1.27
SMNDC1-201ENST00000369592 RGS18Q9NS28 235 aa23■■□□□ 1.27
SMNDC1-201ENST00000369592 BRWD1Q9NSI6 2320 aa22.99■■□□□ 1.27
SMNDC1-201ENST00000369592 SPATA31C1P0DKV0 1188 aa22.99■■□□□ 1.27
SMNDC1-201ENST00000369592 ATP2B1P20020 1258 aa22.99■■□□□ 1.27
SMNDC1-201ENST00000369592 IGFBP4P22692 258 aa22.99■■□□□ 1.27
SMNDC1-201ENST00000369592 YWHABP31946 246 aaKnown RBP22.99■■□□□ 1.27
SMNDC1-201ENST00000369592 CDC42EP1Q00587 391 aa22.99■■□□□ 1.27
SMNDC1-201ENST00000369592 CYP4A11Q02928 519 aa22.99■■□□□ 1.27
SMNDC1-201ENST00000369592 ZNF174Q15697 407 aa22.99■■□□□ 1.27
SMNDC1-201ENST00000369592 TTC38Q5R3I4 469 aa22.99■■□□□ 1.27
SMNDC1-201ENST00000369592 NEK9Q8TD19 979 aa22.99■■□□□ 1.27
SMNDC1-201ENST00000369592 CLP1Q92989 425 aaKnown RBP22.99■■□□□ 1.27
SMNDC1-201ENST00000369592 SAMD11Q96NU1 681 aa22.99■■□□□ 1.27
SMNDC1-201ENST00000369592 LMCD1Q9NZU5 365 aa22.99■■□□□ 1.27
SMNDC1-201ENST00000369592 SARSP49591 514 aaKnown RBP22.98■■□□□ 1.27
SMNDC1-201ENST00000369592 CUL4AQ13619 759 aa22.98■■□□□ 1.27
SMNDC1-201ENST00000369592 CEP170P1Q96L14 293 aa22.98■■□□□ 1.27
SMNDC1-201ENST00000369592 ADAM2Q99965 735 aa22.98■■□□□ 1.27
SMNDC1-201ENST00000369592 JPH2Q9BR39 696 aaPredicted RBP22.98■■□□□ 1.27
SMNDC1-201ENST00000369592 C1orf112Q9NSG2 853 aa22.98■■□□□ 1.27
SMNDC1-201ENST00000369592 ADGRA3Q8IWK6 1321 aa22.98■■□□□ 1.27
SMNDC1-201ENST00000369592 MYO7AQ13402 2215 aa22.98■■□□□ 1.27
SMNDC1-201ENST00000369592 KIAA1671Q9BY89 1806 aa22.98■■□□□ 1.27
SMNDC1-201ENST00000369592 POTEMA6NI47 508 aa22.97■■□□□ 1.27
SMNDC1-201ENST00000369592 GJB2P29033 226 aa22.97■■□□□ 1.27
SMNDC1-201ENST00000369592 RFC5P40937 340 aa22.97■■□□□ 1.27
SMNDC1-201ENST00000369592 EPC2Q52LR7 807 aa22.97■■□□□ 1.27
SMNDC1-201ENST00000369592 SLC24A5Q71RS6 500 aa22.97■■□□□ 1.27
SMNDC1-201ENST00000369592 GDPD5Q8WTR4 605 aa22.97■■□□□ 1.27
SMNDC1-201ENST00000369592 PPM1EQ8WY54 764 aa22.97■■□□□ 1.27
SMNDC1-201ENST00000369592 ZNF668Q96K58 619 aaPredicted RBP22.97■■□□□ 1.27
SMNDC1-201ENST00000369592 ANKEF1Q9NU02 776 aa22.97■■□□□ 1.27
SMNDC1-201ENST00000369592 SUCLA2Q9P2R7 463 aaPredicted RBP22.97■■□□□ 1.27
SMNDC1-201ENST00000369592 KIF3AQ9Y496 699 aa22.97■■□□□ 1.27
SMNDC1-201ENST00000369592 C5orf67F2Z3F1 127 aa22.96■■□□□ 1.27
SMNDC1-201ENST00000369592 OR52Z1P0C646 297 aa22.96■■□□□ 1.27
SMNDC1-201ENST00000369592 XRCC6P12956 609 aaKnown RBP eCLIP22.96■■□□□ 1.27
SMNDC1-201ENST00000369592 DNM2P50570 870 aa22.96■■□□□ 1.27
SMNDC1-201ENST00000369592 NBR1Q14596 966 aa22.96■■□□□ 1.27
SMNDC1-201ENST00000369592 OTUD6AQ7L8S5 288 aa22.96■■□□□ 1.27
SMNDC1-201ENST00000369592 ZNF410Q86VK4 478 aa22.96■■□□□ 1.27
SMNDC1-201ENST00000369592 TPH2Q8IWU9 490 aa22.96■■□□□ 1.27
SMNDC1-201ENST00000369592 TMEM192Q8IY95 271 aa22.96■■□□□ 1.27
SMNDC1-201ENST00000369592 EXOC8Q8IYI6 725 aa22.96■■□□□ 1.27
SMNDC1-201ENST00000369592 ADAMTS19Q8TE59 1207 aa22.96■■□□□ 1.27
SMNDC1-201ENST00000369592 XPNPEP1Q9NQW7 623 aa22.96■■□□□ 1.27
SMNDC1-201ENST00000369592 ATG2AQ2TAZ0 1938 aa22.96■■□□□ 1.27
SMNDC1-201ENST00000369592 CMTR2Q8IYT2 770 aaKnown RBP22.95■■□□□ 1.26
SMNDC1-201ENST00000369592 FIBCD1Q8N539 461 aa22.95■■□□□ 1.26
SMNDC1-201ENST00000369592 FBXO22Q8NEZ5 403 aa22.95■■□□□ 1.26
SMNDC1-201ENST00000369592 ATXN2LQ8WWM7 1075 aaKnown RBP22.95■■□□□ 1.26
SMNDC1-201ENST00000369592 POLR3CQ9BUI4 534 aaPredicted RBP22.95■■□□□ 1.26
SMNDC1-201ENST00000369592 ELAC1Q9H777 363 aaKnown RBP22.95■■□□□ 1.26
SMNDC1-201ENST00000369592 IFT122Q9HBG6 1241 aa22.95■■□□□ 1.26
SMNDC1-201ENST00000369592 THEGQ9P2T0 379 aa22.95■■□□□ 1.26
SMNDC1-201ENST00000369592 MTUS1Q9ULD2 1270 aa22.95■■□□□ 1.26
SMNDC1-201ENST00000369592 A0A087WZ62 844 aa22.94■■□□□ 1.26
SMNDC1-201ENST00000369592 H3BNC9 293 aa22.94■■□□□ 1.26
SMNDC1-201ENST00000369592 GAS2O43903 313 aaKnown RBP22.94■■□□□ 1.26
SMNDC1-201ENST00000369592 STAG3L1P0CL83 205 aa22.94■■□□□ 1.26
SMNDC1-201ENST00000369592 FXR2P51116 673 aaKnown RBP eCLIP22.94■■□□□ 1.26
SMNDC1-201ENST00000369592 CATSPER3Q86XQ3 398 aa22.94■■□□□ 1.26
SMNDC1-201ENST00000369592 KSR1Q8IVT5 923 aa22.94■■□□□ 1.26
SMNDC1-201ENST00000369592 SLC7A3Q8WY07 619 aa22.94■■□□□ 1.26
SMNDC1-201ENST00000369592 FDXACB1Q9BRP7 624 aaPredicted RBP22.94■■□□□ 1.26
SMNDC1-201ENST00000369592 GCOM2Q9BZD3 368 aaPredicted RBP22.94■■□□□ 1.26
SMNDC1-201ENST00000369592 TUFT1Q9NNX1 390 aa22.94■■□□□ 1.26
SMNDC1-201ENST00000369592 NOL7Q9UMY1 257 aaKnown RBP22.94■■□□□ 1.26
SMNDC1-201ENST00000369592 PCDHB6Q9Y5E3 794 aa22.94■■□□□ 1.26
SMNDC1-201ENST00000369592 GTPBP6O43824 516 aaPredicted RBP22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 MED24O75448 989 aa22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 BMPR1AP36894 532 aa22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 TECP42680 631 aa22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 RARRES1P49788 294 aa22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 EMC2Q15006 297 aa22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 XKR9Q5GH70 373 aa22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 RHPN2Q8IUC4 686 aa22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 PRPF31Q8WWY3 499 aaKnown RBP22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 NLRP7Q8WX94 980 aa22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 TMEM143Q96AN5 459 aa22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 ASB2Q96Q27 587 aa22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 TRAIPQ9BWF2 469 aa22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 RNF19AQ9NV58 838 aa22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 TMEM161AQ9NX61 479 aa22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 COL4A3BPQ9Y5P4 624 aa22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 GTF3C3Q9Y5Q9 886 aa22.93■■□□□ 1.26
SMNDC1-201ENST00000369592 DENND3A2RUS2 1198 aa22.92■■□□□ 1.26
SMNDC1-201ENST00000369592 CSDE1O75534 798 aaKnown RBP22.92■■□□□ 1.26
SMNDC1-201ENST00000369592 RB1P06400 928 aa22.92■■□□□ 1.26
SMNDC1-201ENST00000369592 FGFR4P22455 802 aa22.92■■□□□ 1.26
SMNDC1-201ENST00000369592 RPA1P27694 616 aa22.92■■□□□ 1.26
SMNDC1-201ENST00000369592 GATMP50440 423 aa22.92■■□□□ 1.26
SMNDC1-201ENST00000369592 POLGP54098 1239 aaPredicted RBP22.92■■□□□ 1.26
SMNDC1-201ENST00000369592 GNL2Q13823 731 aaKnown RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms