RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 IGKV6-21A0A0C4DH24 114 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 H0YCG3 227 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 DNM2P50570 870 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 PPFIA1Q13136 1202 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 MFSD10Q14728 455 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 PPP2R5AQ15172 486 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 KIAA0753Q2KHM9 967 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 L1TD1Q5T7N2 865 aaKnown RBP13.6□□□□□ -0.23
TUBE1-202ENST00000368662 FOXR2Q6PJQ5 311 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 RNF180Q86T96 592 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 DHX40Q8IX18 779 aaKnown RBP13.6□□□□□ -0.23
TUBE1-202ENST00000368662 AOPEPQ8N6M6 819 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 SPIRE2Q8WWL2 714 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 NELFBQ8WX92 580 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 KAT2BQ92831 832 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 MTG1Q9BT17 334 aaPredicted RBP13.6□□□□□ -0.23
TUBE1-202ENST00000368662 TBC1D7Q9P0N9 293 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 MAPK8IP1Q9UQF2 711 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 HAS3O00219 553 aa13.59□□□□□ -0.23
TUBE1-202ENST00000368662 GCNT3O95395 438 aa13.59□□□□□ -0.23
TUBE1-202ENST00000368662 PGK1P00558 417 aa13.59□□□□□ -0.23
TUBE1-202ENST00000368662 CCNE1P24864 410 aa13.59□□□□□ -0.23
TUBE1-202ENST00000368662 PSEN2P49810 448 aa13.59□□□□□ -0.23
TUBE1-202ENST00000368662 IER5Q5VY09 327 aa13.59□□□□□ -0.23
TUBE1-202ENST00000368662 EPM2AIP1Q7L775 607 aaPredicted RBP13.59□□□□□ -0.23
TUBE1-202ENST00000368662 ZNF720Q7Z2F6 126 aa13.59□□□□□ -0.23
TUBE1-202ENST00000368662 FIZ1Q96SL8 496 aa13.59□□□□□ -0.23
TUBE1-202ENST00000368662 NTPCRQ9BSD7 190 aaKnown RBP13.59□□□□□ -0.23
TUBE1-202ENST00000368662 POLR3FQ9H1D9 316 aaPredicted RBP13.59□□□□□ -0.23
TUBE1-202ENST00000368662 ST6GALNAC4Q9H4F1 302 aa13.59□□□□□ -0.23
TUBE1-202ENST00000368662 POLD4Q9HCU8 107 aa13.59□□□□□ -0.23
TUBE1-202ENST00000368662 GPRC5CQ9NQ84 441 aa13.59□□□□□ -0.23
TUBE1-202ENST00000368662 CTNND2Q9UQB3 1225 aa13.59□□□□□ -0.23
TUBE1-202ENST00000368662 MYH11P35749 1972 aa13.58□□□□□ -0.23
TUBE1-202ENST00000368662 TMOD1P28289 359 aa13.58□□□□□ -0.23
TUBE1-202ENST00000368662 NCKAP1LP55160 1127 aa13.58□□□□□ -0.23
TUBE1-202ENST00000368662 PEX3P56589 373 aa13.58□□□□□ -0.23
TUBE1-202ENST00000368662 MXD4Q14582 209 aaPredicted RBP13.58□□□□□ -0.23
TUBE1-202ENST00000368662 GRIK4Q16099 956 aa13.58□□□□□ -0.23
TUBE1-202ENST00000368662 BMT2Q1RMZ1 405 aa13.58□□□□□ -0.23
TUBE1-202ENST00000368662 SLC9C1Q4G0N8 1177 aa13.58□□□□□ -0.23
TUBE1-202ENST00000368662 KLHDC9Q8NEP7 349 aa13.58□□□□□ -0.23
TUBE1-202ENST00000368662 ZNF507Q8TCN5 953 aa13.58□□□□□ -0.23
TUBE1-202ENST00000368662 SCFD1Q8WVM8 642 aa13.58□□□□□ -0.23
TUBE1-202ENST00000368662 P2RX5Q93086 422 aa13.58□□□□□ -0.23
TUBE1-202ENST00000368662 MYADML2A6NDP7 307 aa13.58□□□□□ -0.24
TUBE1-202ENST00000368662 K7ENM7 598 aa13.58□□□□□ -0.24
TUBE1-202ENST00000368662 C22orf31O95567 290 aa13.58□□□□□ -0.24
TUBE1-202ENST00000368662 HSPA8P11142 646 aaKnown RBP13.58□□□□□ -0.24
TUBE1-202ENST00000368662 ARL2P36404 184 aa13.58□□□□□ -0.24
TUBE1-202ENST00000368662 NAMPTP43490 491 aa13.58□□□□□ -0.24
TUBE1-202ENST00000368662 LRRC63Q05C16 580 aa13.58□□□□□ -0.24
TUBE1-202ENST00000368662 LRRC41Q15345 812 aa13.58□□□□□ -0.24
TUBE1-202ENST00000368662 TPD52L1Q16890 204 aaPredicted RBP13.58□□□□□ -0.24
TUBE1-202ENST00000368662 SPATA1Q5VX52 437 aa13.58□□□□□ -0.24
TUBE1-202ENST00000368662 CENPPQ6IPU0 288 aa13.58□□□□□ -0.24
TUBE1-202ENST00000368662 PPP4R3CPQ6ZMV5 832 aa13.58□□□□□ -0.24
TUBE1-202ENST00000368662 CTU1Q7Z7A3 348 aaKnown RBP13.58□□□□□ -0.24
TUBE1-202ENST00000368662 PSPC1Q8WXF1 523 aaKnown RBP13.58□□□□□ -0.24
TUBE1-202ENST00000368662 HVCN1Q96D96 273 aa13.58□□□□□ -0.24
TUBE1-202ENST00000368662 TSG101Q99816 390 aa13.58□□□□□ -0.24
TUBE1-202ENST00000368662 KMT5AQ9NQR1 393 aa13.58□□□□□ -0.24
TUBE1-202ENST00000368662 ASAP2O43150 1006 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 CABYRO75952 493 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 SMIM10L2AP0DMW4 78 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 SMIM10L2BP0DMW5 78 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 GNAT1P11488 350 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 NMT1P30419 496 aaKnown RBP13.57□□□□□ -0.24
TUBE1-202ENST00000368662 NPTX2P47972 431 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 CTCFP49711 727 aaPredicted RBP13.57□□□□□ -0.24
TUBE1-202ENST00000368662 IGBP1P78318 339 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 PKN2Q16513 984 aaKnown RBP13.57□□□□□ -0.24
TUBE1-202ENST00000368662 EFCAB12Q6NXP0 572 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 SH3TC2Q8TF17 1288 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 KCNN1Q92952 543 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 TMEM143Q96AN5 459 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 TMEM206Q9H813 350 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 SUGCTQ9HAC7 445 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 NFE2L3Q9Y4A8 694 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 PHLPP2Q6ZVD8 1323 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 CCDC169A6NNP5 214 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 MYBP10242 640 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 KLRC1P26715 233 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 CASP5P51878 434 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 IRX5P78411 483 aaPredicted RBP13.57□□□□□ -0.24
TUBE1-202ENST00000368662 GTF2BQ00403 316 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 NCAPHQ15003 741 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 KNOP1Q1ED39 458 aaKnown RBP13.57□□□□□ -0.24
TUBE1-202ENST00000368662 MTHFD1LQ6UB35 978 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 HAUS6Q7Z4H7 955 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 METTL13Q8N6R0 699 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 C7orf31Q8N865 590 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 GLIS3Q8NEA6 775 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 TSEN34Q9BSV6 310 aaKnown RBP13.57□□□□□ -0.24
TUBE1-202ENST00000368662 STRA6Q9BX79 667 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 FGFBP2Q9BYJ0 223 aa13.57□□□□□ -0.24
TUBE1-202ENST00000368662 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.57□□□□□ -0.24
TUBE1-202ENST00000368662 MOXD2PA6NHM9 499 aa13.56□□□□□ -0.24
TUBE1-202ENST00000368662 PDXKO00764 312 aa13.56□□□□□ -0.24
TUBE1-202ENST00000368662 PPP1R37O75864 691 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms