RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 ANKRD62A6NC57 917 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 B4E1Z4 1266 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 NKRFO15226 690 aaKnown RBP eCLIP4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 SLC26A4O43511 780 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 SRGAP2CP0DJJ0 459 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 CDK4P11802 303 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 ZNF37AP17032 561 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 EPHA5P54756 1037 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 DBPQ10586 325 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 EPHA10Q5JZY3 1008 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 GAREM2Q75VX8 874 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 FILIP1Q7Z7B0 1213 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 MRGPREQ86SM8 312 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 DHX37Q8IY37 1157 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 ANKRD35Q8N283 1001 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 GSTCDQ8NEC7 633 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 SCLYQ96I15 445 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 GPATCH3Q96I76 525 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 MPHOSPH9Q99550 1183 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 SLKQ9H2G2 1235 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 IPPKQ9H8X2 491 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 TRIM39Q9HCM9 518 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 ARHGAP28Q9P2N2 729 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 PACSIN3Q9UKS6 424 aa4.98□□□□□ -1.61
ECHDC1-201ENST00000368287 FAM83GA6ND36 823 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 ZAR1LA6NP61 321 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 ARVCFO00192 962 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 RFPL3O75679 317 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 NPTXRO95502 500 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 CD38P28907 300 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 FLT3P36888 993 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 MRE11P49959 708 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 CRY1Q16526 586 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 C16orf59Q7L2K0 433 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 CXXC5Q7LFL8 322 aaKnown RBP4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 OTOP2Q7RTS6 562 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 BRAPQ7Z569 592 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 ADGRG3Q86Y34 549 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 RTKN2Q8IZC4 609 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 PCDH19Q8TAB3 1148 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 BBC3Q96PG8 261 aaPredicted RBP4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 CDC42EP3Q9UKI2 254 aa4.97□□□□□ -1.61
ECHDC1-201ENST00000368287 INO80B-WBP1J3KQ70 363 aa4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 WNT9AO14904 365 aa4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 OPA1O60313 960 aa4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 DNAJC8O75937 253 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 RASGRP1O95267 797 aa4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 ASLP04424 464 aa4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 MASP1P48740 699 aa4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 DNM2P50570 870 aa4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 SCNN1GP51170 649 aa4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 IL13RA1P78552 427 aa4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 EIF4HQ15056 248 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 HABP4Q5JVS0 413 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 COLEC12Q5KU26 742 aa4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 Q6ZRM9 215 aa4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 UBE2R2Q712K3 238 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 DDX53Q86TM3 631 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 VRK3Q8IV63 474 aa4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 NINJ1Q92982 152 aa4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 FAM126AQ9BYI3 521 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 INO80BQ9C086 356 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 AGO3Q9H9G7 860 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 FAM184BQ9ULE4 1060 aa4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 SH3BP1Q9Y3L3 701 aa4.96□□□□□ -1.62
ECHDC1-201ENST00000368287 TCRBV16S1A1N1A0A5B0 115 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 CCDC66A2RUB6 948 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 PMS2P1A4D2B8 440 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 TRAF5O00463 557 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 PYGMP11217 842 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 IGFALSP35858 605 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 MAN2A2P49641 1150 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 HGFACQ04756 655 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 TOB2Q14106 344 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 ZNF460Q14592 562 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 GPR19Q15760 415 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 TM4SF20Q53R12 229 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 STRIP1Q5VSL9 837 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 NIM1KQ8IY84 436 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 NLGN4XQ8N0W4 816 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 SLC25A43Q8WUT9 341 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 CD244Q9BZW8 370 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 IFT57Q9NWB7 429 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 MAGEC2Q9UBF1 373 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 PLAAQ9Y263 795 aa4.95□□□□□ -1.62
ECHDC1-201ENST00000368287 A0A087X0B3 334 aa4.94□□□□□ -1.62
ECHDC1-201ENST00000368287 CANXP27824 592 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-201ENST00000368287 RIN1Q13671 783 aa4.94□□□□□ -1.62
ECHDC1-201ENST00000368287 ZNF362Q5T0B9 420 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-201ENST00000368287 PAPD7Q5XG87 772 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-201ENST00000368287 BTBD8Q5XKL5 378 aa4.94□□□□□ -1.62
ECHDC1-201ENST00000368287 TRIM68Q6AZZ1 485 aa4.94□□□□□ -1.62
ECHDC1-201ENST00000368287 ARHGAP36Q6ZRI8 547 aa4.94□□□□□ -1.62
ECHDC1-201ENST00000368287 OSTM1Q86WC4 334 aa4.94□□□□□ -1.62
ECHDC1-201ENST00000368287 SYNE4Q8N205 404 aa4.94□□□□□ -1.62
ECHDC1-201ENST00000368287 MIEF2Q96C03 454 aa4.94□□□□□ -1.62
ECHDC1-201ENST00000368287 MFSD3Q96ES6 412 aa4.94□□□□□ -1.62
ECHDC1-201ENST00000368287 INTS7Q9NVH2 962 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-201ENST00000368287 TNPO3Q9Y5L0 923 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-201ENST00000368287 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms