RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ERICH1Q86X53 443 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 OR6B3Q8NGW1 331 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 RAB3IL1Q8TBN0 382 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 C7orf25Q9BPX7 421 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 CAPS2Q9BXY5 557 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 LRRC4Q9HBW1 653 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 ABCB6Q9NP58 842 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 HDAC6Q9UBN7 1215 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 PPFIA4O75335 1185 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 FXR1P51114 621 aaKnown RBP eCLIP13.25□□□□□ -0.29
PTPRK-203ENST00000368207 RINT1Q6NUQ1 792 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 GLYCTKQ8IVS8 523 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 RHOT2Q8IXI1 618 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 RPUSD2Q8IZ73 545 aaKnown RBP13.25□□□□□ -0.29
PTPRK-203ENST00000368207 GABPB2Q8TAK5 448 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-203ENST00000368207 EPC1Q9H2F5 836 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 KCNF1Q9H3M0 494 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-203ENST00000368207 SLC12A2P55011 1212 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 CDO1Q16878 200 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 PDZD4Q76G19 769 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-203ENST00000368207 CCNYQ8ND76 341 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 C11orf70Q9BRQ4 267 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 INTS2Q9H0H0 1204 aaKnown RBP13.25□□□□□ -0.29
PTPRK-203ENST00000368207 TUFT1Q9NNX1 390 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 NGRNQ9NPE2 291 aaKnown RBP13.25□□□□□ -0.29
PTPRK-203ENST00000368207 DNAJC17Q9NVM6 304 aaKnown RBP13.25□□□□□ -0.29
PTPRK-203ENST00000368207 LIMA1Q9UHB6 759 aaKnown RBP13.25□□□□□ -0.29
PTPRK-203ENST00000368207 A0A1B0GTH6 734 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 A0A1W2PQC6 194 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 PNMA8AQ86V59 439 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-203ENST00000368207 SLC38A10Q9HBR0 1119 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 KIAA1586Q9HCI6 787 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 FAN1Q9Y2M0 1017 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 I3L4J1 428 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 BBOF1Q8ND07 529 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 ATG4CQ96DT6 458 aa13.25□□□□□ -0.29
PTPRK-203ENST00000368207 DDTLA6NHG4 134 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-203ENST00000368207 CSPG5O95196 566 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 SLCO1A2P46721 670 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 TOB1P50616 345 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-203ENST00000368207 ARPP19P56211 112 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 LMNB2Q03252 620 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 NTRK3Q16288 839 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 TTC31Q49AM3 519 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-203ENST00000368207 PTF1AQ7RTS3 328 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 ODF2LQ9ULJ1 636 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 PACSIN2Q9UNF0 486 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-203ENST00000368207 SLC37A4O43826 429 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 CRCPO75575 148 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 SAT1P21673 171 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 PHKA2P46019 1235 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 ZNF699Q32M78 642 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 KRT39Q6A163 491 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 NFRKBQ6P4R8 1299 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 SMC1BQ8NDV3 1235 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 AGPAT5Q9NUQ2 364 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 NFU1Q9UMS0 254 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 PDXKO00764 312 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 GGPS1O95749 300 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 STAT5BP51692 787 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 RWDD2BP57060 319 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 HDLBPQ00341 1268 aaKnown RBP13.24□□□□□ -0.29
PTPRK-203ENST00000368207 ST3GAL1Q11201 340 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 ATP2A3Q93084 1043 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 WDR24Q96S15 920 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 CAPN11Q9UMQ6 739 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 RNF40O75150 1001 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 TXNP10599 105 aaKnown RBP13.24□□□□□ -0.29
PTPRK-203ENST00000368207 ZNF18P17022 549 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 BASP1P80723 227 aaKnown RBP13.24□□□□□ -0.29
PTPRK-203ENST00000368207 PLA2G4FQ68DD2 849 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 KCTD6Q8NC69 237 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 TMEM143Q96AN5 459 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 ZDHHC15Q96MV8 337 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 ZWILCHQ9H900 591 aa13.24□□□□□ -0.29
PTPRK-203ENST00000368207 ESYT2A0FGR8 921 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 MYBP10242 640 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 ZNF211Q13398 564 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-203ENST00000368207 ZC2HC1CQ53FD0 456 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-203ENST00000368207 RUNDC3BQ96NL0 473 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 HEMGNQ9BXL5 484 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 RBAKQ9NYW8 714 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-203ENST00000368207 ANAPC5Q9UJX4 755 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 TBX3O15119 743 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 SMARCA1P28370 1054 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 DR1Q01658 176 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 SEMA3FQ13275 785 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 CASP8Q14790 479 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 ANKRD20A3Q5VUR7 823 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 TWF2Q6IBS0 349 aaKnown RBP13.23□□□□□ -0.29
PTPRK-203ENST00000368207 RASGRP2Q7LDG7 609 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 METTL23Q86XA0 190 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 RNF149Q8NC42 400 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 HACL1Q9UJ83 578 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 AGO2Q9UKV8 859 aaKnown RBP13.23□□□□□ -0.29
PTPRK-203ENST00000368207 FTLP02792 175 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-203ENST00000368207 HSPA6P17066 643 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 GBP1P32455 592 aa13.23□□□□□ -0.29
PTPRK-203ENST00000368207 GPC5P78333 572 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms