RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 KIAA0391O15091 583 aaKnown RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 TEX33O43247 280 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 AP3M2P53677 418 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 CTTNQ14247 550 aaKnown RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 RNF219Q5W0B1 726 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 LRIG3Q6UXM1 1119 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 RBM43Q6ZSC3 357 aaKnown RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 SYDE1Q6ZW31 735 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 CFAP61Q8NHU2 1237 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 UHMK1Q8TAS1 419 aaKnown RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 MTRQ99707 1265 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 STRIP2Q9ULQ0 834 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 TBXAS1P24557 533 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 GGCXP38435 758 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 SLC7A5Q01650 507 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 MYO1EQ12965 1108 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 SF3B3Q15393 1217 aaKnown RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 CCDC157Q569K6 752 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 E4F1Q66K89 784 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 ZNF34Q8IZ26 560 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 SPICE1Q8N0Z3 855 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 TTC39CQ8N584 583 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 C2orf69Q8N8R5 385 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 PRPF38AQ8NAV1 312 aaKnown RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 COG1Q8WTW3 980 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 HVCN1Q96D96 273 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 AP1M1Q9BXS5 423 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 PRDM5Q9NQX1 630 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 UBE4BO95155 1302 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 LRRD1A4D1F6 860 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 NEMP1O14524 444 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 PRDX5P30044 214 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 CRKP46108 304 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 TADA2BQ86TJ2 420 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 NME8Q8N427 588 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 SLC10A4Q96EP9 437 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 ATP6V0A4Q9HBG4 840 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 KCND2Q9NZV8 630 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 DIP2BQ9P265 1576 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 CD163L1Q9NR16 1453 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 ARL4AP40617 200 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 DBN1Q16643 649 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 PDIK1LQ8N165 341 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 ELMOD1Q8N336 334 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 DCLK2Q8N568 766 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 CEP120Q8N960 986 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 KCTD6Q8NC69 237 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 FAM84BQ96KN1 310 aaPredicted RBP9.65□□□□□ -0.86
SYNE1-205ENST00000367251 MAD1L1Q9Y6D9 718 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 WDR64B1ANS9 1081 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 TXNDC9O14530 226 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 IFNAR2P48551 515 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 PDE1BQ01064 536 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 GFPT1Q06210 699 aaPredicted RBP9.65□□□□□ -0.86
SYNE1-205ENST00000367251 MMTAG2Q9BU76 263 aaKnown RBP9.65□□□□□ -0.86
SYNE1-205ENST00000367251 ANGPTL2Q9UKU9 493 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 ATP8B3O60423 1300 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 POTEMA6NI47 508 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 P4HBP07237 508 aaKnown RBP9.65□□□□□ -0.86
SYNE1-205ENST00000367251 KRT3P12035 628 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 NFKBIAP25963 317 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 PPP2R2AP63151 447 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 DARS2Q6PI48 645 aaKnown RBP9.65□□□□□ -0.86
SYNE1-205ENST00000367251 MMS22LQ6ZRQ5 1243 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 CEP95Q96GE4 821 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 ATP6V1G3Q96LB4 118 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 SLC12A6Q9UHW9 1150 aa9.65□□□□□ -0.86
SYNE1-205ENST00000367251 ACTN1P12814 892 aa9.65□□□□□ -0.87
SYNE1-205ENST00000367251 PMS2P54278 862 aa9.65□□□□□ -0.87
SYNE1-205ENST00000367251 TNFAIP2Q03169 654 aa9.65□□□□□ -0.87
SYNE1-205ENST00000367251 SNX1Q13596 522 aa9.65□□□□□ -0.87
SYNE1-205ENST00000367251 SPARCL1Q14515 664 aa9.65□□□□□ -0.87
SYNE1-205ENST00000367251 KLHL38Q2WGJ6 581 aa9.65□□□□□ -0.87
SYNE1-205ENST00000367251 ANKRD20A4Q4UJ75 823 aa9.65□□□□□ -0.87
SYNE1-205ENST00000367251 ANKRD20A8PQ5CZ79 823 aa9.65□□□□□ -0.87
SYNE1-205ENST00000367251 ANKRD20A2Q5SQ80 823 aa9.65□□□□□ -0.87
SYNE1-205ENST00000367251 ANKRD20A1Q5TYW2 823 aa9.65□□□□□ -0.87
SYNE1-205ENST00000367251 ENGASEQ8NFI3 743 aa9.65□□□□□ -0.87
SYNE1-205ENST00000367251 RFFLQ8WZ73 363 aa9.65□□□□□ -0.87
SYNE1-205ENST00000367251 SCYL1Q96KG9 808 aa9.65□□□□□ -0.87
SYNE1-205ENST00000367251 HAUS8Q9BT25 410 aa9.65□□□□□ -0.87
SYNE1-205ENST00000367251 INTS2Q9H0H0 1204 aaKnown RBP9.65□□□□□ -0.87
SYNE1-205ENST00000367251 AKT3Q9Y243 479 aa9.65□□□□□ -0.87
SYNE1-205ENST00000367251 ZNF335Q9H4Z2 1342 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 PRPSAP2O60256 369 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 EYA4O95677 639 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 RECQLP46063 649 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 TAP1Q03518 808 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 RC3H1Q5TC82 1133 aaKnown RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 PADI6Q6TGC4 694 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 ZNF467Q7Z7K2 595 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 SYN2Q92777 582 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 ATP6V1E2Q96A05 226 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 NSUN4Q96CB9 384 aaKnown RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 PSD3Q9NYI0 1048 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 FBXO40Q9UH90 709 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 SNX12Q9UMY4 172 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 PSMD14O00487 310 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms