RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 NCAPHQ15003 741 aa9.4□□□□□ -0.9
H3F3A-201ENST00000366813 CCDC144BQ3MJ40 725 aa9.4□□□□□ -0.9
H3F3A-201ENST00000366813 CRTC3Q6UUV7 619 aa9.4□□□□□ -0.9
H3F3A-201ENST00000366813 PPP1R42Q7Z4L9 355 aa9.4□□□□□ -0.9
H3F3A-201ENST00000366813 TDHQ8IZJ6 230 aa9.4□□□□□ -0.9
H3F3A-201ENST00000366813 NAT16Q8N8M0 369 aa9.4□□□□□ -0.9
H3F3A-201ENST00000366813 CNTD2Q9H8S5 307 aa9.4□□□□□ -0.9
H3F3A-201ENST00000366813 MSRB2Q9Y3D2 182 aa9.4□□□□□ -0.9
H3F3A-201ENST00000366813 SCN9AQ15858 1988 aa9.4□□□□□ -0.9
H3F3A-201ENST00000366813 TAF1P21675 1872 aa9.4□□□□□ -0.91
H3F3A-201ENST00000366813 PRRG2O14669 202 aa9.39□□□□□ -0.91
H3F3A-201ENST00000366813 GSTM1P09488 218 aa9.39□□□□□ -0.91
H3F3A-201ENST00000366813 SYN1P17600 705 aa9.39□□□□□ -0.91
H3F3A-201ENST00000366813 KIAA1211LQ6NV74 962 aa9.39□□□□□ -0.91
H3F3A-201ENST00000366813 KIF6Q6ZMV9 814 aa9.39□□□□□ -0.91
H3F3A-201ENST00000366813 MORC1Q86VD1 984 aa9.39□□□□□ -0.91
H3F3A-201ENST00000366813 MAFAQ8NHW3 353 aaPredicted RBP9.39□□□□□ -0.91
H3F3A-201ENST00000366813 PANK1Q8TE04 598 aa9.39□□□□□ -0.91
H3F3A-201ENST00000366813 U2AF1L4Q8WU68 220 aaKnown RBP9.39□□□□□ -0.91
H3F3A-201ENST00000366813 MKL1Q969V6 931 aa9.39□□□□□ -0.91
H3F3A-201ENST00000366813 UTP14AQ9BVJ6 771 aaKnown RBP9.39□□□□□ -0.91
H3F3A-201ENST00000366813 NUP98P52948 1817 aa9.38□□□□□ -0.91
H3F3A-201ENST00000366813 WNT10BO00744 389 aa9.38□□□□□ -0.91
H3F3A-201ENST00000366813 TP53P04637 393 aaPredicted RBP9.38□□□□□ -0.91
H3F3A-201ENST00000366813 MAGEA10P43363 369 aaPredicted RBP9.38□□□□□ -0.91
H3F3A-201ENST00000366813 EPHB3P54753 998 aa9.38□□□□□ -0.91
H3F3A-201ENST00000366813 AXDND1Q5T1B0 1012 aaPredicted RBP9.38□□□□□ -0.91
H3F3A-201ENST00000366813 MRM1Q6IN84 353 aaKnown RBP9.38□□□□□ -0.91
H3F3A-201ENST00000366813 SLCO6A1Q86UG4 719 aa9.38□□□□□ -0.91
H3F3A-201ENST00000366813 TBC1D16Q8TBP0 767 aa9.38□□□□□ -0.91
H3F3A-201ENST00000366813 EYA3Q99504 573 aa9.38□□□□□ -0.91
H3F3A-201ENST00000366813 FAM86C1Q9NVL1 165 aa9.38□□□□□ -0.91
H3F3A-201ENST00000366813 KLHL14Q9P2G3 628 aa9.38□□□□□ -0.91
H3F3A-201ENST00000366813 RRP7AQ9Y3A4 280 aaKnown RBP9.38□□□□□ -0.91
H3F3A-201ENST00000366813 ZSWIM8A7E2V4 1837 aa9.38□□□□□ -0.91
H3F3A-201ENST00000366813 SIPA1L3O60292 1781 aaPredicted RBP9.37□□□□□ -0.91
H3F3A-201ENST00000366813 NUDT19A8MXV4 375 aa9.37□□□□□ -0.91
H3F3A-201ENST00000366813 SASH1O94885 1247 aa9.37□□□□□ -0.91
H3F3A-201ENST00000366813 NOP2P46087 812 aaKnown RBP9.37□□□□□ -0.91
H3F3A-201ENST00000366813 LACTBP83111 547 aaPredicted RBP9.37□□□□□ -0.91
H3F3A-201ENST00000366813 ANKRD39Q53RE8 183 aa9.37□□□□□ -0.91
H3F3A-201ENST00000366813 HLA-DQA1Q5Y7H0 255 aa9.37□□□□□ -0.91
H3F3A-201ENST00000366813 TMC6Q7Z403 805 aa9.37□□□□□ -0.91
H3F3A-201ENST00000366813 JAMLQ86YT9 394 aa9.37□□□□□ -0.91
H3F3A-201ENST00000366813 MZB1Q8WU39 189 aa9.37□□□□□ -0.91
H3F3A-201ENST00000366813 CELF1Q92879 486 aaKnown RBP9.37□□□□□ -0.91
H3F3A-201ENST00000366813 POLR3GLQ9BT43 218 aa9.37□□□□□ -0.91
H3F3A-201ENST00000366813 ZSWIM4Q9H7M6 989 aa9.37□□□□□ -0.91
H3F3A-201ENST00000366813 ACSL6Q9UKU0 697 aa9.37□□□□□ -0.91
H3F3A-201ENST00000366813 A0A1W2PQJ5 194 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 SHOXO15266 292 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 SGPL1O95470 568 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 MYL6BP14649 208 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 AFF3P51826 1226 aaKnown RBP9.36□□□□□ -0.91
H3F3A-201ENST00000366813 RASA3Q14644 834 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 KIF22Q14807 665 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 PARP10Q53GL7 1025 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 DCAF15Q66K64 600 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 FAM109BQ6ICB4 259 aaPredicted RBP9.36□□□□□ -0.91
H3F3A-201ENST00000366813 LRP10Q7Z4F1 713 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 BRI3BPQ8WY22 251 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 RELTQ969Z4 430 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 CDX2Q99626 313 aaPredicted RBP9.36□□□□□ -0.91
H3F3A-201ENST00000366813 HAUS7Q99871 368 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 MXD3Q9BW11 206 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 CCDC113Q9H0I3 377 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 IMPACTQ9P2X3 320 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 RIPOR2Q9Y4F9 1068 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 NCANO14594 1321 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 CEMIPQ8WUJ3 1361 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 PIEZO1Q92508 2521 aa9.36□□□□□ -0.91
H3F3A-201ENST00000366813 ZNF646O15015 1829 aaPredicted RBP9.36□□□□□ -0.91
H3F3A-201ENST00000366813 CACNA1AO00555 2505 aa9.35□□□□□ -0.91
H3F3A-201ENST00000366813 CBFA2T2O43439 604 aa9.35□□□□□ -0.91
H3F3A-201ENST00000366813 CTGFP29279 349 aa9.35□□□□□ -0.91
H3F3A-201ENST00000366813 CDR1P51861 262 aa9.35□□□□□ -0.91
H3F3A-201ENST00000366813 FAM43AQ8N2R8 423 aa9.35□□□□□ -0.91
H3F3A-201ENST00000366813 TMEM52Q8NDY8 209 aa9.35□□□□□ -0.91
H3F3A-201ENST00000366813 RAET1EQ8TD07 263 aa9.35□□□□□ -0.91
H3F3A-201ENST00000366813 BRF1Q92994 677 aa9.35□□□□□ -0.91
H3F3A-201ENST00000366813 PAWRQ96IZ0 340 aaKnown RBP9.35□□□□□ -0.91
H3F3A-201ENST00000366813 JMJD8Q96S16 334 aa9.35□□□□□ -0.91
H3F3A-201ENST00000366813 SUSD2Q9UGT4 822 aa9.35□□□□□ -0.91
H3F3A-201ENST00000366813 TFRCP02786 760 aaKnown RBP9.34□□□□□ -0.91
H3F3A-201ENST00000366813 PRMT2P55345 433 aa9.34□□□□□ -0.91
H3F3A-201ENST00000366813 BMS1Q14692 1282 aaKnown RBP9.34□□□□□ -0.91
H3F3A-201ENST00000366813 NFE2L2Q16236 605 aa9.34□□□□□ -0.91
H3F3A-201ENST00000366813 RTP2Q5QGT7 225 aa9.34□□□□□ -0.91
H3F3A-201ENST00000366813 CNKSR3Q6P9H4 555 aa9.34□□□□□ -0.91
H3F3A-201ENST00000366813 C20orf173Q96LM9 149 aa9.34□□□□□ -0.91
H3F3A-201ENST00000366813 DEPDC7Q96QD5 511 aa9.34□□□□□ -0.91
H3F3A-201ENST00000366813 SRPK1Q96SB4 655 aaKnown RBP9.34□□□□□ -0.91
H3F3A-201ENST00000366813 SLC12A9Q9BXP2 914 aa9.34□□□□□ -0.91
H3F3A-201ENST00000366813 KLHL25Q9H0H3 589 aa9.34□□□□□ -0.91
H3F3A-201ENST00000366813 PIF1Q9H611 641 aa9.34□□□□□ -0.91
H3F3A-201ENST00000366813 SNTG2Q9NY99 539 aa9.34□□□□□ -0.91
H3F3A-201ENST00000366813 SRRDQ9UH36 339 aa9.34□□□□□ -0.91
H3F3A-201ENST00000366813 FAM221BA6H8Z2 402 aa9.33□□□□□ -0.92
H3F3A-201ENST00000366813 PDPK1O15530 556 aa9.33□□□□□ -0.92
H3F3A-201ENST00000366813 UFL1O94874 794 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms