RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 C1orf167Q5SNV9 1468 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 LRRIQ4A6NIV6 560 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 CLIC2O15247 247 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 SERPINB6P35237 376 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 SLC1A1P43005 524 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 MKNK1Q9BUB5 465 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 UVRAGQ9P2Y5 699 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 SCP2P22307 547 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 SLC20A2Q08357 652 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 TTC39CQ8N584 583 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 SRBD1Q8N5C6 995 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 NOA1Q8NC60 698 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 ARL2BPQ9Y2Y0 163 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 SRGAP2BP0DMP2 458 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 GUCY1A3Q02108 690 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 FAM98CQ17RN3 349 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 SFR1Q86XK3 245 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 ELAC2Q9BQ52 826 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 DDX23Q9BUQ8 820 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 NARFQ9UHQ1 456 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 TACC3Q9Y6A5 838 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 ALAS1P13196 640 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 HSPA9P38646 679 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 IRX2Q9BZI1 471 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 CARD9Q9H257 536 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 SUCLA2Q9P2R7 463 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 SNRPFP62306 86 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 TAP1Q03518 808 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 NCAPHQ15003 741 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 ANKRD27Q96NW4 1050 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 CNTNAP5Q8WYK1 1306 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 LDHAP00338 332 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 STAT4Q14765 748 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 NUP85Q9BW27 656 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 PRELPP51888 382 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 CDR2Q01850 454 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 C12orf60Q5U649 245 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 KDM7AQ6ZMT4 941 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 ST13P4Q8IZP2 240 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 UHMK1Q8TAS1 419 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 CEP95Q96GE4 821 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 DDX47Q9H0S4 455 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 PCDHA6Q9UN73 950 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 PCDHA8Q9Y5H6 950 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 ZHX2Q9Y6X8 837 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 TMOD1P28289 359 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.394e-7■■■■□ 23.4
CDC42BPA-202ENST00000366764 ANKRD20A4Q4UJ75 823 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 ANKRD20A8PQ5CZ79 823 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 ANKRD20A2Q5SQ80 823 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 ANKRD20A1Q5TYW2 823 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 TGS1Q96RS0 853 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 ISCUQ9H1K1 167 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 TUFT1Q9NNX1 390 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 TBC1D22BQ9NU19 505 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 H7C0C1 242 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 BAG2O95816 211 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 ATP5OP48047 213 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 SH3RF3Q8TEJ3 882 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 ANKRD36BP1Q96IX9 119 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 IPO11Q9UI26 975 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 HSPA8P11142 646 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 DRAP1Q14919 205 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 CRLF3Q8IUI8 442 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 CCDC97Q96F63 343 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 ROPN1BQ9BZX4 212 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 ROPN1Q9HAT0 212 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 ANAPC7Q9UJX3 599 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 PDE1BQ01064 536 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 SAAL1Q96ER3 474 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 KIAA0391O15091 583 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 PPIP5K2O43314 1243 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 SNX24Q9Y343 169 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 ESYT3A0FGR9 886 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 ESRRAP11474 423 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 MIS18BP1Q6P0N0 1132 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 ALKBH8Q96BT7 664 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 SGSM3Q96HU1 749 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 FAM237AA0A1B0GTK4 181 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 KRT7P08729 469 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 PEX19P40855 299 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 ESRRGP62508 458 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 KAZNQ674X7 775 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 TBC1D1Q86TI0 1168 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 YARSP54577 528 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 NBPF20Q3BBV1 942 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 GSPT2Q8IYD1 628 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 ARHGAP18Q8N392 663 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 ATP11CQ8NB49 1132 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 UIMC1Q96RL1 719 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 ANKFY1Q9P2R3 1169 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 PLS3P13797 630 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 SFNP31947 248 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 CCDC137Q6PK04 289 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 ZNF564Q8TBZ8 553 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 CYP26B1Q9NR63 512 aa12.63□□□□□ -0.39
CDC42BPA-202ENST00000366764 PFDN6O15212 129 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 PPFIA2O75334 1257 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 CCND2P30279 289 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 NSUN4Q96CB9 384 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms