RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 ATP2B1P20020 1258 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 NUCB2P80303 420 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 LPIN1Q14693 890 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 LETM2Q2VYF4 491 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 PAN2Q504Q3 1202 aaKnown RBP9.22□□□□□ -0.93
MRPL55-211ENST00000366738 ERMP1Q7Z2K6 904 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 BRAPQ7Z569 592 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 FRMD5Q7Z6J6 570 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 NEK8Q86SG6 692 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 NLRX1Q86UT6 975 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 KLHL23Q8NBE8 558 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 VN1R2Q8NFZ6 395 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 SPPL3Q8TCT6 385 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 POF1BQ8WVV4 589 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 LINC01599Q8WXQ3 324 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 PPP2R3CQ969Q6 453 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 ZNF689Q96CS4 500 aaPredicted RBP9.22□□□□□ -0.93
MRPL55-211ENST00000366738 PLVAPQ9BX97 442 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 AGO3Q9H9G7 860 aaKnown RBP9.22□□□□□ -0.93
MRPL55-211ENST00000366738 JADE2Q9NQC1 790 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 PCDHB6Q9Y5E3 794 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 NRCAMQ92823 1304 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 CHD8Q9HCK8 2581 aa9.21□□□□□ -0.93
MRPL55-211ENST00000366738 MBLAC1A4D2B0 266 aaPredicted RBP9.21□□□□□ -0.94
MRPL55-211ENST00000366738 FAM86B1E9PN63 330 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 ENPP3O14638 875 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 PER2O15055 1255 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 DGKIO75912 1065 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 FOSP01100 380 aaPredicted RBP9.21□□□□□ -0.94
MRPL55-211ENST00000366738 FAM86B2P0C5J1 330 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 ARP10275 920 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 NBL1P41271 181 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 ID4P47928 161 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 GATMP50440 423 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 DNM1Q05193 864 aaKnown RBP9.21□□□□□ -0.94
MRPL55-211ENST00000366738 PPFIA1Q13136 1202 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 ITGB3BPQ13352 177 aaPredicted RBP9.21□□□□□ -0.94
MRPL55-211ENST00000366738 MTMR1Q13613 665 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 GRIK4Q16099 956 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 TTC38Q5R3I4 469 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 ZBTB33Q86T24 672 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 RTN4RL1Q86UN2 441 aaPredicted RBP9.21□□□□□ -0.94
MRPL55-211ENST00000366738 CRIPAKQ8N1N5 446 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 TMEM105Q8N8V8 129 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 TRAPPC12Q8WVT3 735 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 DNAJB3Q8WWF6 145 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 SEPT1Q8WYJ6 367 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 SUSD6Q92537 303 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 TNPO1Q92973 898 aaKnown RBP9.21□□□□□ -0.94
MRPL55-211ENST00000366738 P2RX5Q93086 422 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 LENG9Q96B70 501 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 RIPOR3Q96MK2 946 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 USP28Q96RU2 1077 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 ZSCAN16Q9H4T2 348 aaPredicted RBP9.21□□□□□ -0.94
MRPL55-211ENST00000366738 KCNH7Q9NS40 1196 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 ZNF215Q9UL58 517 aaPredicted RBP9.21□□□□□ -0.94
MRPL55-211ENST00000366738 CLIC4Q9Y696 253 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 CHD6Q8TD26 2715 aa9.21□□□□□ -0.94
MRPL55-211ENST00000366738 IGLV3-22A0A075B6J6 115 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 CCNT1O60563 726 aaKnown RBP9.2□□□□□ -0.94
MRPL55-211ENST00000366738 CYP3A4P08684 503 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 GNAT1P11488 350 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 INSRRP14616 1297 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 ATF7P17544 494 aaPredicted RBP9.2□□□□□ -0.94
MRPL55-211ENST00000366738 MCM7P33993 719 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 IGBP1P78318 339 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 CEBPZQ03701 1054 aaKnown RBP9.2□□□□□ -0.94
MRPL55-211ENST00000366738 ZNF174Q15697 407 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 FBXO47Q5MNV8 452 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 POTEDQ86YR6 584 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 TEX2Q8IWB9 1127 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 GIMAP8Q8ND71 665 aaPredicted RBP9.2□□□□□ -0.94
MRPL55-211ENST00000366738 GJA10Q969M2 543 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 MXRA8Q9BRK3 442 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 APOL5Q9BWW9 433 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 TMEM60Q9H2L4 133 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 SMOC2Q9H3U7 446 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 TLE6Q9H808 572 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.2□□□□□ -0.94
MRPL55-211ENST00000366738 ERAP1Q9NZ08 941 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 CDH22Q9UJ99 828 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 TUBE1Q9UJT0 475 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 NOL7Q9UMY1 257 aaKnown RBP9.2□□□□□ -0.94
MRPL55-211ENST00000366738 CDY2AQ9Y6F7 541 aa9.2□□□□□ -0.94
MRPL55-211ENST00000366738 MYO10Q9HD67 2058 aa9.19□□□□□ -0.94
MRPL55-211ENST00000366738 MED19A0JLT2 244 aaPredicted RBP9.19□□□□□ -0.94
MRPL55-211ENST00000366738 CCNE2O96020 404 aa9.19□□□□□ -0.94
MRPL55-211ENST00000366738 PDIA4P13667 645 aaKnown RBP9.19□□□□□ -0.94
MRPL55-211ENST00000366738 IBSPP21815 317 aaPredicted RBP9.19□□□□□ -0.94
MRPL55-211ENST00000366738 CD52P31358 61 aa9.19□□□□□ -0.94
MRPL55-211ENST00000366738 CIITAP33076 1130 aa9.19□□□□□ -0.94
MRPL55-211ENST00000366738 TRAPPC10P48553 1259 aa9.19□□□□□ -0.94
MRPL55-211ENST00000366738 ACTR2P61160 394 aa9.19□□□□□ -0.94
MRPL55-211ENST00000366738 TMEM62Q0P6H9 643 aa9.19□□□□□ -0.94
MRPL55-211ENST00000366738 PLCB4Q15147 1175 aa9.19□□□□□ -0.94
MRPL55-211ENST00000366738 SF3A1Q15459 793 aaKnown RBP9.19□□□□□ -0.94
MRPL55-211ENST00000366738 RILPL1Q5EBL4 403 aa9.19□□□□□ -0.94
MRPL55-211ENST00000366738 MCTP2Q6DN12 878 aa9.19□□□□□ -0.94
MRPL55-211ENST00000366738 TAF2Q6P1X5 1199 aa9.19□□□□□ -0.94
MRPL55-211ENST00000366738 CMTR2Q8IYT2 770 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms