RNA–Protein interactions for RNA: ENST00000366732.5

MRPL55-206, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-206ENST00000366732 USP28Q96RU2 1077 aa17.58■□□□□ 0.4
MRPL55-206ENST00000366732 ADAMTS10Q9H324 1103 aa17.58■□□□□ 0.4
MRPL55-206ENST00000366732 AGO3Q9H9G7 860 aaKnown RBP17.58■□□□□ 0.4
MRPL55-206ENST00000366732 CDHR5Q9HBB8 845 aa17.58■□□□□ 0.4
MRPL55-206ENST00000366732 BMP2KQ9NSY1 1161 aaPredicted RBP17.58■□□□□ 0.4
MRPL55-206ENST00000366732 RNF216Q9NWF9 866 aaPredicted RBP17.58■□□□□ 0.4
MRPL55-206ENST00000366732 CFAP45Q9UL16 551 aa17.58■□□□□ 0.4
MRPL55-206ENST00000366732 SRPRBQ9Y5M8 271 aaKnown RBP17.58■□□□□ 0.4
MRPL55-206ENST00000366732 COL4A3BPQ9Y5P4 624 aa17.58■□□□□ 0.4
MRPL55-206ENST00000366732 EVPLQ92817 2033 aa17.58■□□□□ 0.4
MRPL55-206ENST00000366732 A0A087WWV3 80 aa17.57■□□□□ 0.4
MRPL55-206ENST00000366732 USO1O60763 962 aaKnown RBP17.57■□□□□ 0.4
MRPL55-206ENST00000366732 MARCKSP29966 332 aaPredicted RBP17.57■□□□□ 0.4
MRPL55-206ENST00000366732 TXLNAP40222 546 aa17.57■□□□□ 0.4
MRPL55-206ENST00000366732 DRP2Q13474 957 aa17.57■□□□□ 0.4
MRPL55-206ENST00000366732 TFDP1Q14186 410 aa17.57■□□□□ 0.4
MRPL55-206ENST00000366732 PTPAQ15257 358 aa17.57■□□□□ 0.4
MRPL55-206ENST00000366732 PADI6Q6TGC4 694 aa17.57■□□□□ 0.4
MRPL55-206ENST00000366732 PRPF31Q8WWY3 499 aaKnown RBP17.57■□□□□ 0.4
MRPL55-206ENST00000366732 LRCH3Q96II8 777 aa17.57■□□□□ 0.4
MRPL55-206ENST00000366732 NLRP4Q96MN2 994 aa17.57■□□□□ 0.4
MRPL55-206ENST00000366732 OSBPL7Q9BZF2 842 aa17.57■□□□□ 0.4
MRPL55-206ENST00000366732 BHMT2Q9H2M3 363 aa17.57■□□□□ 0.4
MRPL55-206ENST00000366732 ST3GAL5Q9UNP4 418 aa17.57■□□□□ 0.4
MRPL55-206ENST00000366732 NOC2LQ9Y3T9 749 aaKnown RBP17.57■□□□□ 0.4
MRPL55-206ENST00000366732 ATP6V1DQ9Y5K8 247 aa17.57■□□□□ 0.4
MRPL55-206ENST00000366732 MORC2Q9Y6X9 1032 aaPredicted RBP17.57■□□□□ 0.4
MRPL55-206ENST00000366732 LAMA2P24043 3122 aaKnown RBP17.56■□□□□ 0.4
MRPL55-206ENST00000366732 DENND3A2RUS2 1198 aa17.56■□□□□ 0.4
MRPL55-206ENST00000366732 SOX1O00570 391 aaPredicted RBP17.56■□□□□ 0.4
MRPL55-206ENST00000366732 EYA4O95677 639 aa17.56■□□□□ 0.4
MRPL55-206ENST00000366732 SRGAP2CP0DJJ0 459 aa17.56■□□□□ 0.4
MRPL55-206ENST00000366732 DARSP14868 501 aaKnown RBP17.56■□□□□ 0.4
MRPL55-206ENST00000366732 ZSCAN20P17040 1043 aaPredicted RBP17.56■□□□□ 0.4
MRPL55-206ENST00000366732 SFPQP23246 707 aaKnown RBP eCLIP17.56■□□□□ 0.4
MRPL55-206ENST00000366732 NASPP49321 788 aaPredicted RBP17.56■□□□□ 0.4
MRPL55-206ENST00000366732 LAMTOR4Q0VGL1 99 aa17.56■□□□□ 0.4
MRPL55-206ENST00000366732 ECM1Q16610 540 aa17.56■□□□□ 0.4
MRPL55-206ENST00000366732 HERC6Q8IVU3 1022 aa17.56■□□□□ 0.4
MRPL55-206ENST00000366732 MYOCDQ8IZQ8 938 aa17.56■□□□□ 0.4
MRPL55-206ENST00000366732 KRI1Q8N9T8 703 aaKnown RBP17.56■□□□□ 0.4
MRPL55-206ENST00000366732 MMTAG2Q9BU76 263 aaKnown RBP17.56■□□□□ 0.4
MRPL55-206ENST00000366732 PCDHA11Q9Y5I1 949 aa17.56■□□□□ 0.4
MRPL55-206ENST00000366732 TET1Q8NFU7 2136 aa17.56■□□□□ 0.4
MRPL55-206ENST00000366732 A0A087WZ62 844 aa17.55■□□□□ 0.4
MRPL55-206ENST00000366732 GRXCR1A8MXD5 290 aa17.55■□□□□ 0.4
MRPL55-206ENST00000366732 ENPP3O14638 875 aa17.55■□□□□ 0.4
MRPL55-206ENST00000366732 TLL1O43897 1013 aa17.55■□□□□ 0.4
MRPL55-206ENST00000366732 TCTN1Q2MV58 587 aa17.55■□□□□ 0.4
MRPL55-206ENST00000366732 FOXD4L6Q3SYB3 417 aaPredicted RBP17.55■□□□□ 0.4
MRPL55-206ENST00000366732 HYIQ5T013 277 aa17.55■□□□□ 0.4
MRPL55-206ENST00000366732 FAM102BQ5T8I3 360 aa17.55■□□□□ 0.4
MRPL55-206ENST00000366732 FOXD4L3Q6VB84 417 aaPredicted RBP17.55■□□□□ 0.4
MRPL55-206ENST00000366732 MAEAQ7L5Y9 396 aa17.55■□□□□ 0.4
MRPL55-206ENST00000366732 TMEM40Q8WWA1 233 aa17.55■□□□□ 0.4
MRPL55-206ENST00000366732 ZNF668Q96K58 619 aaPredicted RBP17.55■□□□□ 0.4
MRPL55-206ENST00000366732 FDXACB1Q9BRP7 624 aaPredicted RBP17.55■□□□□ 0.4
MRPL55-206ENST00000366732 PBX4Q9BYU1 374 aa17.55■□□□□ 0.4
MRPL55-206ENST00000366732 ERVK-5Q9HDB9 667 aa17.55■□□□□ 0.4
MRPL55-206ENST00000366732 TFIP11Q9UBB9 837 aaKnown RBP17.55■□□□□ 0.4
MRPL55-206ENST00000366732 CCDC39Q9UFE4 941 aa17.55■□□□□ 0.4
MRPL55-206ENST00000366732 TMEM265A0A087WTH1 108 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 E9PMD0 336 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 SPTLC2O15270 562 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 YEATS4O95619 227 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 BRD1O95696 1058 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 CYP11B2P19099 503 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 DNAJB2P25686 324 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 ARL2P36404 184 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 PHKA2P46019 1235 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 DEFB103AP81534 67 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 NCBP1Q09161 790 aaKnown RBP17.54■□□□□ 0.4
MRPL55-206ENST00000366732 PKP1Q13835 747 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 ZNF697Q5TEC3 545 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 FAM109BQ6ICB4 259 aaPredicted RBP17.54■□□□□ 0.4
MRPL55-206ENST00000366732 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.54■□□□□ 0.4
MRPL55-206ENST00000366732 SRGAP1Q7Z6B7 1085 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 FAM228AQ86W67 206 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 KSR1Q8IVT5 923 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 RNF149Q8NC42 400 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 LINC00301Q8NCQ3 95 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 TOP1MTQ969P6 601 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 TIFAQ96CG3 184 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 RAD9AQ99638 391 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 CSRNP2Q9H175 543 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 XPNPEP1Q9NQW7 623 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 C1orf112Q9NSG2 853 aa17.54■□□□□ 0.4
MRPL55-206ENST00000366732 FBXO2Q9UK22 296 aaPredicted RBP17.54■□□□□ 0.4
MRPL55-206ENST00000366732 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.53■□□□□ 0.4
MRPL55-206ENST00000366732 PPP6R2O75170 966 aa17.53■□□□□ 0.4
MRPL55-206ENST00000366732 UPP2O95045 317 aa17.53■□□□□ 0.4
MRPL55-206ENST00000366732 GJB5O95377 273 aa17.53■□□□□ 0.4
MRPL55-206ENST00000366732 SSBP05455 408 aaKnown RBP eCLIP17.53■□□□□ 0.4
MRPL55-206ENST00000366732 STAG3L1P0CL83 205 aa17.53■□□□□ 0.4
MRPL55-206ENST00000366732 ANP32AP39687 249 aaKnown RBP17.53■□□□□ 0.4
MRPL55-206ENST00000366732 RABGGTBP53611 331 aa17.53■□□□□ 0.4
MRPL55-206ENST00000366732 POU5F1BQ06416 359 aa17.53■□□□□ 0.4
MRPL55-206ENST00000366732 PCBP1Q15365 356 aaKnown RBP eCLIP17.53■□□□□ 0.4
MRPL55-206ENST00000366732 CATSPER4Q7RTX7 472 aa17.53■□□□□ 0.4
MRPL55-206ENST00000366732 KCNG4Q8TDN1 519 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms