RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 ALDH6A1Q02252 535 aaKnown RBP3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 GRIN1Q05586 938 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 KLF1Q13351 362 aaPredicted RBP3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 ADAM9Q13443 819 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 MYBPC3Q14896 1274 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 STILQ15468 1287 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 CDSNQ15517 529 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 PRR31Q5SQ13 230 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 ODR4Q5SWX8 454 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 KCNK18Q7Z418 384 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 SPRED1Q7Z699 444 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 PLEKHH3Q7Z736 793 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 BCL6BQ8N143 479 aaPredicted RBP3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 FAM26EQ8N5C1 309 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 KYQ8NBH2 561 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 SCYL1Q96KG9 808 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 ASB1Q9Y576 335 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 PPP2R3BQ9Y5P8 575 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 ZNF536O15090 1300 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 C9orf118A6NHY6 69 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 LAMTOR5O43504 91 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 AKAP10O43572 662 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 H2AFYO75367 372 aaKnown RBP3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 KRT37O76014 449 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 ZRANB2O95218 330 aaKnown RBP eCLIP3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 HMGB1P09429 215 aaKnown RBP3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 RBP3P10745 1247 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 STAT5AP42229 794 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 MTNR1BP49286 362 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 EPHB1P54762 984 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 ITGA1P56199 1179 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 KANK2Q63ZY3 851 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 ETV3LQ6ZN32 361 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 CXorf67Q86X51 503 aaPredicted RBP3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 TXNDC5Q8NBS9 432 aaKnown RBP3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 C1orf162Q8NEQ5 155 aaPredicted RBP3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 RTF1Q92541 710 aaKnown RBP3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 TOE1Q96GM8 510 aaKnown RBP3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 LCORQ96JN0 433 aaPredicted RBP3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 CAMKK2Q96RR4 588 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 FOXB1Q99853 325 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 ZNF747Q9BV97 191 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 RHOBTB2Q9BYZ6 727 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 PITHD1Q9GZP4 211 aaPredicted RBP3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 KLC2Q9H0B6 622 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 CDH19Q9H159 772 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 ZNF277Q9NRM2 450 aaPredicted RBP3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 TOMM22Q9NS69 142 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 RIC8BQ9NVN3 520 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 C14orf119Q9NWQ9 140 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 USP36Q9P275 1121 aaKnown RBP3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 ST6GALNAC2Q9UJ37 374 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 NUB1Q9Y5A7 615 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 EID1Q9Y6B2 187 aa3.31□□□□□ -1.88
RNU4-56P-201ENST00000364700 SHTN1A0MZ66 631 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 HIP1RO75146 1068 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 S100BP04271 92 aaPredicted RBP3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 PFKMP08237 780 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 CD40P25942 277 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 LSP1P33241 339 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 FAPQ12884 760 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 ODF1Q14990 250 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 TMEM132BQ14DG7 1078 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 LRRC41Q15345 812 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 ZNF174Q15697 407 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 ABCB5Q2M3G0 1257 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 PITRM1Q5JRX3 1037 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 TMEM240Q5SV17 173 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 MCTP2Q6DN12 878 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 LRSAM1Q6UWE0 723 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 UNQ6494/PRO21346Q6UXR6 183 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 LIMS2Q7Z4I7 341 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 ZC3H18Q86VM9 953 aaKnown RBP3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 ZFPM1Q8IX07 1006 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 ZZZ3Q8IYH5 903 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 DNERQ8NFT8 737 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 JDP2Q8WYK2 163 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 CHMP4CQ96CF2 233 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 MTMR8Q96EF0 704 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 AHCYL2Q96HN2 611 aaKnown RBP3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 FUBP3Q96I24 572 aaKnown RBP eCLIP3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 MAML3Q96JK9 1138 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 GBP4Q96PP9 640 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 YIPF4Q9BSR8 244 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 PCED1AQ9H1Q7 454 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 CD248Q9HCU0 757 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 KCND1Q9NSA2 647 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 CCM2LQ9NUG4 571 aaPredicted RBP3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 DENND2AQ9ULE3 1009 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 SPEF1Q9Y4P9 236 aa3.3□□□□□ -1.88
RNU4-56P-201ENST00000364700 PRSS38A1L453 326 aa3.29□□□□□ -1.88
RNU4-56P-201ENST00000364700 PRAMEF25A6NGN4 478 aa3.29□□□□□ -1.88
RNU4-56P-201ENST00000364700 TSPAN6O43657 245 aa3.29□□□□□ -1.88
RNU4-56P-201ENST00000364700 KDM1AO60341 852 aa3.29□□□□□ -1.88
RNU4-56P-201ENST00000364700 B4GALT3O60512 393 aa3.29□□□□□ -1.88
RNU4-56P-201ENST00000364700 APPP05067 770 aa3.29□□□□□ -1.88
RNU4-56P-201ENST00000364700 PTGS1P23219 599 aa3.29□□□□□ -1.88
RNU4-56P-201ENST00000364700 RGS3P49796 1198 aa3.29□□□□□ -1.88
RNU4-56P-201ENST00000364700 RAB27AP51159 221 aa3.29□□□□□ -1.88
RNU4-56P-201ENST00000364700 PFKPQ01813 784 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms