RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 GRIK1P39086 918 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 PKP1Q13835 747 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 DDX53Q86TM3 631 aaKnown RBP11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 SPATA2LQ8IUW3 424 aaPredicted RBP11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 HINFPQ9BQA5 517 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 HACD3Q9P035 362 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 SLC13A4Q9UKG4 626 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 RPS6KA5O75582 802 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 SERPING1P05155 500 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 PAMP19021 973 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 SDC4P31431 198 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 GTF2A2P52657 109 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 IL1RL1Q01638 556 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 DPCR1Q3MIW9 517 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 EXT2Q93063 718 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 FGD4Q96M96 766 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 POTEFA5A3E0 1075 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 CAMTA2O94983 1202 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 POTEIP0CG38 1075 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 EFNA5P52803 228 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 TRIP13Q15645 432 aaPredicted RBP11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 POTEGQ6S5H5 508 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 POTEEQ6S8J3 1075 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 POTEDQ86YR6 584 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 CCHCR1Q8TD31 782 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 MTFR1LQ9H019 292 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 DNAJC12Q9UKB3 198 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 PRRG1O14668 218 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 CA4P22748 312 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 SF3B3Q15393 1217 aaKnown RBP11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 CDC42EP5Q6NZY7 148 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 RAD54LQ92698 747 aa11.33□□□□□ -0.6
CACNA1S-201ENST00000362061 SHROOM2Q13796 1616 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 GOLGA8QA0A0J9YX86 632 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 GOLGA8OA6NCC3 632 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 GOLGA8NF8WBI6 632 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 EIF4A3P38919 411 aaKnown RBP11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 NME3Q13232 169 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 TRIM28Q13263 835 aaKnown RBP11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 BBS9Q3SYG4 887 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 KLC3Q6P597 504 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 TTC39CQ8N584 583 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 TMEM39BQ9GZU3 492 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 SIK2Q9H0K1 926 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 SP110Q9HB58 689 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 BARHL2Q9NY43 387 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 ST8SIA6P61647 398 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 HHIPL2Q6UWX4 724 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 FRA10AC1Q70Z53 315 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 MRFAP1L1Q96HT8 127 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 SPATA17Q96L03 361 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 PPP1R12CQ9BZL4 782 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 LSM7Q9UK45 103 aaKnown RBP11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 PGRMC1O00264 195 aaKnown RBP11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 ENC1O14682 589 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 PRKCBP05771 671 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 CEP55Q53EZ4 464 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 C10orf76Q5T2E6 689 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 ZNF467Q7Z7K2 595 aaPredicted RBP11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 DEPDC1BQ8WUY9 529 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 SEPT1Q8WYJ6 367 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 NSUN4Q96CB9 384 aaKnown RBP11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 SAAL1Q96ER3 474 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 RBAKQ9NYW8 714 aaPredicted RBP11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 GSG1L2A8MUP6 293 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 FTCDO95954 541 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 TBXAS1P24557 533 aaPredicted RBP11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 NECTIN1Q15223 517 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 C12orf60Q5U649 245 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 DDX50Q9BQ39 737 aaKnown RBP11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 FAM114A2Q9NRY5 505 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 TJP2Q9UDY2 1190 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 PLTPP55058 493 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 TMEM62Q0P6H9 643 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 LRGUKQ96M69 825 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 EIF2AK1Q9BQI3 630 aaKnown RBP11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 EDEM3Q9BZQ6 932 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 RCOR1Q9UKL0 485 aa11.32□□□□□ -0.6
CACNA1S-201ENST00000362061 ESRRBO95718 433 aa11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 CHEK2O96017 543 aa11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 PAPOLAP51003 745 aaKnown RBP11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 TADA2BQ86TJ2 420 aa11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 GLYCTKQ8IVS8 523 aa11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 HVCN1Q96D96 273 aa11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 TNIP3Q96KP6 325 aa11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 SAMSN1Q9NSI8 373 aaKnown RBP11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 AGO2Q9UKV8 859 aaKnown RBP11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 FLT1P17948 1338 aa11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 TTC4O95801 387 aa11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 NDUFB10O96000 172 aa11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 CALB1P05937 261 aa11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 ZBED6P86452 979 aa11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 NSUN2Q08J23 767 aaKnown RBP eCLIP11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 MXD4Q14582 209 aaPredicted RBP11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 PTPN21Q16825 1174 aa11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 GLB1LQ6UWU2 654 aa11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 SH3KBP1Q96B97 665 aa11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 SART1O43290 800 aaKnown RBP11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 EPHX2P34913 555 aa11.31□□□□□ -0.6
CACNA1S-201ENST00000362061 USP11P51784 963 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms