RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 GMPSP49915 693 aaPredicted RBP20.67■□□□□ 0.9
CMTM3-201ENST00000361909 MARSP56192 900 aaKnown RBP20.67■□□□□ 0.9
CMTM3-201ENST00000361909 ASIC2Q16515 512 aa20.67■□□□□ 0.9
CMTM3-201ENST00000361909 USP17L2Q6R6M4 530 aa20.67■□□□□ 0.9
CMTM3-201ENST00000361909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.67■□□□□ 0.9
CMTM3-201ENST00000361909 SYNPO2Q9UMS6 1093 aa20.67■□□□□ 0.9
CMTM3-201ENST00000361909 NOC2LQ9Y3T9 749 aaKnown RBP20.67■□□□□ 0.9
CMTM3-201ENST00000361909 FAM196BA6NMK8 535 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 PHF20L1A8MW92 1017 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 CTNND1O60716 968 aaKnown RBP20.66■□□□□ 0.9
CMTM3-201ENST00000361909 NOL4O94818 638 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 ZNF131P52739 623 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 LMNB2Q03252 620 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 TNFAIP1Q13829 316 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 SEPT2Q15019 361 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 RBM26Q5T8P6 1007 aaKnown RBP20.66■□□□□ 0.9
CMTM3-201ENST00000361909 RASGRP4Q8TDF6 673 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 NSMCE1Q8WV22 266 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 RAB17Q9H0T7 212 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 BARHL2Q9NY43 387 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 UTP11Q9Y3A2 253 aaKnown RBP20.66■□□□□ 0.9
CMTM3-201ENST00000361909 USP17L5A8MUK1 530 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 CEP104O60308 925 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 SLURP2P0DP57 97 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 DNA2P51530 1060 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 FKBP3Q00688 224 aaKnown RBP20.66■□□□□ 0.9
CMTM3-201ENST00000361909 MAP3K10Q02779 954 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 KLHL30Q0D2K2 578 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 GPATCH4Q5T3I0 446 aaKnown RBP20.66■□□□□ 0.9
CMTM3-201ENST00000361909 GBP7Q8N8V2 638 aaPredicted RBP20.66■□□□□ 0.9
CMTM3-201ENST00000361909 SPAG5Q96R06 1193 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 NEUROG2Q9H2A3 272 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 RIOX1Q9H6W3 641 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 PGAP2Q9UHJ9 254 aa20.66■□□□□ 0.9
CMTM3-201ENST00000361909 CNOT7Q9UIV1 285 aaKnown RBP20.66■□□□□ 0.9
CMTM3-201ENST00000361909 BAZ2BQ9UIF8 2168 aaKnown RBP20.66■□□□□ 0.9
CMTM3-201ENST00000361909 SLC35G1Q2M3R5 365 aa20.65■□□□□ 0.9
CMTM3-201ENST00000361909 MICALL2Q8IY33 904 aa20.65■□□□□ 0.9
CMTM3-201ENST00000361909 SYCE1Q8N0S2 351 aa20.65■□□□□ 0.9
CMTM3-201ENST00000361909 LRRC47Q8N1G4 583 aaKnown RBP20.65■□□□□ 0.9
CMTM3-201ENST00000361909 LRRC57Q8N9N7 239 aa20.65■□□□□ 0.9
CMTM3-201ENST00000361909 GPKOWQ92917 476 aaPredicted RBP eCLIP20.65■□□□□ 0.9
CMTM3-201ENST00000361909 LSM14BQ9BX40 385 aaKnown RBP20.65■□□□□ 0.9
CMTM3-201ENST00000361909 TXLNGYQ9BZA5 131 aa20.65■□□□□ 0.9
CMTM3-201ENST00000361909 NLRC4Q9NPP4 1024 aa20.65■□□□□ 0.9
CMTM3-201ENST00000361909 TTC7AQ9ULT0 858 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-201ENST00000361909 PACSIN2Q9UNF0 486 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-201ENST00000361909 A0A087X0T9 212 aa20.65■□□□□ 0.9
CMTM3-201ENST00000361909 A0A0A6YYK5 440 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-201ENST00000361909 KRIT1O00522 736 aa20.65■□□□□ 0.9
CMTM3-201ENST00000361909 FAM228BP0C875 321 aa20.65■□□□□ 0.9
CMTM3-201ENST00000361909 GOLGA8HP0CJ92 632 aa20.65■□□□□ 0.9
CMTM3-201ENST00000361909 VEGFAP15692 232 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-201ENST00000361909 MMP13P45452 471 aa20.65■□□□□ 0.9
CMTM3-201ENST00000361909 DHX9Q08211 1270 aaKnown RBP20.65■□□□□ 0.9
CMTM3-201ENST00000361909 CLUL1Q15846 466 aa20.65■□□□□ 0.9
CMTM3-201ENST00000361909 L3MBTL3Q96JM7 780 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-201ENST00000361909 STMN4Q9H169 189 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-201ENST00000361909 SPATS2LQ9NUQ6 558 aaKnown RBP20.65■□□□□ 0.9
CMTM3-201ENST00000361909 TRPC6Q9Y210 931 aa20.65■□□□□ 0.9
CMTM3-201ENST00000361909 MTMR7Q9Y216 660 aa20.65■□□□□ 0.9
CMTM3-201ENST00000361909 GJA3Q9Y6H8 435 aa20.65■□□□□ 0.9
CMTM3-201ENST00000361909 CCDC169A6NNP5 214 aa20.64■□□□□ 0.89
CMTM3-201ENST00000361909 LUC7L3O95232 432 aaKnown RBP20.64■□□□□ 0.89
CMTM3-201ENST00000361909 MMEP08473 750 aa20.64■□□□□ 0.89
CMTM3-201ENST00000361909 ZBTB48P10074 688 aaPredicted RBP20.64■□□□□ 0.89
CMTM3-201ENST00000361909 EEF2P13639 858 aaKnown RBP20.64■□□□□ 0.89
CMTM3-201ENST00000361909 CCND1P24385 295 aa20.64■□□□□ 0.89
CMTM3-201ENST00000361909 POLR2FP61218 127 aaKnown RBP20.64■□□□□ 0.89
CMTM3-201ENST00000361909 ZNF543Q08ER8 600 aa20.64■□□□□ 0.89
CMTM3-201ENST00000361909 MYO1EQ12965 1108 aa20.64■□□□□ 0.89
CMTM3-201ENST00000361909 NONOQ15233 471 aaKnown RBP eCLIP20.64■□□□□ 0.89
CMTM3-201ENST00000361909 ZCWPW2Q504Y3 356 aa20.64■□□□□ 0.89
CMTM3-201ENST00000361909 TRPM8Q7Z2W7 1104 aa20.64■□□□□ 0.89
CMTM3-201ENST00000361909 LARP4BQ92615 738 aaKnown RBP20.64■□□□□ 0.89
CMTM3-201ENST00000361909 SUCLA2Q9P2R7 463 aaPredicted RBP20.64■□□□□ 0.89
CMTM3-201ENST00000361909 DIS3Q9Y2L1 958 aaKnown RBP20.64■□□□□ 0.89
CMTM3-201ENST00000361909 STXBP3O00186 592 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 PPP1R12BO60237 982 aaPredicted RBP20.63■□□□□ 0.89
CMTM3-201ENST00000361909 RPSAP08865 295 aaKnown RBP20.63■□□□□ 0.89
CMTM3-201ENST00000361909 CLEC10AQ8IUN9 316 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 ATXN2LQ8WWM7 1075 aaKnown RBP20.63■□□□□ 0.89
CMTM3-201ENST00000361909 STAMBPL1Q96FJ0 436 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 FMO2Q99518 471 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 SYT17Q9BSW7 474 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 MMTAG2Q9BU76 263 aaKnown RBP20.63■□□□□ 0.89
CMTM3-201ENST00000361909 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.63■□□□□ 0.89
CMTM3-201ENST00000361909 TMEM39BQ9GZU3 492 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 SBF1O95248 1867 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 hCG_1984214I3L0E3 225 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 TULP1O00294 542 aaPredicted RBP20.63■□□□□ 0.89
CMTM3-201ENST00000361909 DAPK3O43293 454 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 ATP2C2O75185 946 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 BRD2P25440 801 aaKnown RBP20.63■□□□□ 0.89
CMTM3-201ENST00000361909 NPEPPSP55786 919 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 RAPGEF1Q13905 1077 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 CDCA2Q69YH5 1023 aaPredicted RBP20.63■□□□□ 0.89
CMTM3-201ENST00000361909 SLFN11Q7Z7L1 901 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 SIAH1Q8IUQ4 282 aa20.63■□□□□ 0.89
CMTM3-201ENST00000361909 MYOCDQ8IZQ8 938 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms