RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ANGPTL3Q9Y5C1 460 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 GOLGA8KD6RF30 607 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 MFAP3LO75121 409 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 CIITAP33076 1130 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 SBK1Q52WX2 424 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 PROM2Q8N271 834 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 CNOT8Q9UFF9 292 aaKnown RBP19.96■□□□□ 0.79
CLIP2-202ENST00000361545 ANAPC7Q9UJX3 599 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 SLC8A2Q9UPR5 921 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 KCNH4Q9UQ05 1017 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 RIMBP3CA6NJZ7 1639 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 RIMBP3BA6NNM3 1639 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 RIMBP3Q9UFD9 1639 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 PHLPP2Q6ZVD8 1323 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 KLRK1P26718 216 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 HUNKP57058 714 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 THOC5Q13769 683 aaKnown RBP19.96■□□□□ 0.79
CLIP2-202ENST00000361545 PDIA6Q15084 440 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 EPHA7Q15375 998 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 ZNF500O60304 480 aaPredicted RBP19.95■□□□□ 0.78
CLIP2-202ENST00000361545 YWHABP31946 246 aaKnown RBP19.95■□□□□ 0.78
CLIP2-202ENST00000361545 RBBP5Q15291 538 aaKnown RBP19.95■□□□□ 0.78
CLIP2-202ENST00000361545 ATP6V1E2Q96A05 226 aa19.95■□□□□ 0.78
CLIP2-202ENST00000361545 PRR12Q9ULL5 1215 aa19.95■□□□□ 0.78
CLIP2-202ENST00000361545 C6orf222P0C671 652 aaPredicted RBP19.95■□□□□ 0.78
CLIP2-202ENST00000361545 TEX2Q8IWB9 1127 aa19.95■□□□□ 0.78
CLIP2-202ENST00000361545 RPUSD2Q8IZ73 545 aaKnown RBP19.95■□□□□ 0.78
CLIP2-202ENST00000361545 PANX2Q96RD6 677 aa19.95■□□□□ 0.78
CLIP2-202ENST00000361545 NYAP2Q9P242 653 aa19.95■□□□□ 0.78
CLIP2-202ENST00000361545 FMR1NBQ8N0W7 255 aaPredicted RBP19.95■□□□□ 0.78
CLIP2-202ENST00000361545 FAM217BQ9NTX9 383 aaPredicted RBP19.95■□□□□ 0.78
CLIP2-202ENST00000361545 CACNA2D3Q8IZS8 1091 aa19.95■□□□□ 0.78
CLIP2-202ENST00000361545 PBKQ96KB5 322 aa19.95■□□□□ 0.78
CLIP2-202ENST00000361545 C11orf70Q9BRQ4 267 aa19.95■□□□□ 0.78
CLIP2-202ENST00000361545 ARHGAP42A6NI28 874 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 STK25O00506 426 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 KRT10P13645 584 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 IFNAR2P48551 515 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 EXOSC10Q01780 885 aaKnown RBP19.94■□□□□ 0.78
CLIP2-202ENST00000361545 HAUS6Q7Z4H7 955 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 FAM205CA6NFA0 338 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 RASA1P20936 1047 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 INTS5Q6P9B9 1019 aaKnown RBP19.94■□□□□ 0.78
CLIP2-202ENST00000361545 EFCAB13Q8IY85 973 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 PRPF31Q8WWY3 499 aaKnown RBP19.94■□□□□ 0.78
CLIP2-202ENST00000361545 VCPKMTQ9H867 229 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 ABCF3Q9NUQ8 709 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 PIK3C2BO00750 1634 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 LGALS16A8MUM7 142 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 TRIM49P0CI25 452 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 TRIM49CP0CI26 452 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 COL23A1Q86Y22 540 aaPredicted RBP19.94■□□□□ 0.78
CLIP2-202ENST00000361545 RBAKQ9NYW8 714 aaPredicted RBP19.94■□□□□ 0.78
CLIP2-202ENST00000361545 LRRC53A6NM62 1247 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 RWDD2BP57060 319 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 ATP2C1P98194 919 aaPredicted RBP19.94■□□□□ 0.78
CLIP2-202ENST00000361545 BBS9Q3SYG4 887 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 C16orf86Q6ZW13 317 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 FAM71BQ8TC56 605 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 LRRC8CQ8TDW0 803 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 CEP72Q9P209 647 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 SEL1LQ9UBV2 794 aa19.94■□□□□ 0.78
CLIP2-202ENST00000361545 M0QYV0 167 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 TTC19Q6DKK2 380 aaPredicted RBP19.93■□□□□ 0.78
CLIP2-202ENST00000361545 PARK7Q99497 189 aaKnown RBP19.93■□□□□ 0.78
CLIP2-202ENST00000361545 STK38LQ9Y2H1 464 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 NPHP3-ACAD11A0A0J9YXS1 232 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 FOXN1O15353 648 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 CELF2O95319 508 aaKnown RBP19.93■□□□□ 0.78
CLIP2-202ENST00000361545 CTSHP09668 335 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 RHOT2Q8IXI1 618 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 SLC16A10Q8TF71 515 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 CFAP57Q96MR6 1250 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 EPB41L4AQ9HCS5 686 aaPredicted RBP19.93■□□□□ 0.78
CLIP2-202ENST00000361545 DLC1Q96QB1 1528 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 CCL15-CCL14A0A0B4J2E2 113 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 CCL15Q16663 113 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 LMBRD2Q68DH5 695 aaPredicted RBP19.93■□□□□ 0.78
CLIP2-202ENST00000361545 C1orf228Q6PIY5 440 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 IGDCC4Q8TDY8 1250 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 RABGGTAQ92696 567 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 KIF12Q96FN5 646 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 GPBP1L1Q9HC44 474 aaPredicted RBP19.93■□□□□ 0.78
CLIP2-202ENST00000361545 MSH2P43246 934 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 KCNV1Q6PIU1 500 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 NUF2Q9BZD4 464 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 AGO2Q9UKV8 859 aaKnown RBP19.93■□□□□ 0.78
CLIP2-202ENST00000361545 UBE4BO95155 1302 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 GPC4O75487 556 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 PCK1P35558 622 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 ELMOD1Q8N336 334 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 CFAP36Q96G28 342 aa19.93■□□□□ 0.78
CLIP2-202ENST00000361545 DNAJC17Q9NVM6 304 aaKnown RBP19.93■□□□□ 0.78
CLIP2-202ENST00000361545 PIN4Q9Y237 131 aaKnown RBP19.93■□□□□ 0.78
CLIP2-202ENST00000361545 ADORA2BP29275 332 aa19.92■□□□□ 0.78
CLIP2-202ENST00000361545 NMT1P30419 496 aaKnown RBP19.92■□□□□ 0.78
CLIP2-202ENST00000361545 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.92■□□□□ 0.78
CLIP2-202ENST00000361545 NR3C2P08235 984 aa19.92■□□□□ 0.78
CLIP2-202ENST00000361545 TMED2Q15363 201 aa19.92■□□□□ 0.78
CLIP2-202ENST00000361545 SHC4Q6S5L8 630 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms