RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 C6orf89Q6UWU4 347 aa9.89□□□□□ -0.83
TOP1-201ENST00000361337 KCNV2Q8TDN2 545 aa9.89□□□□□ -0.83
TOP1-201ENST00000361337 HOOK2Q96ED9 719 aa9.89□□□□□ -0.83
TOP1-201ENST00000361337 LSM14BQ9BX40 385 aaKnown RBP9.89□□□□□ -0.83
TOP1-201ENST00000361337 SLC40A1Q9NP59 571 aa9.89□□□□□ -0.83
TOP1-201ENST00000361337 SH3GLB2Q9NR46 395 aa9.89□□□□□ -0.83
TOP1-201ENST00000361337 KLC4Q9NSK0 619 aa9.89□□□□□ -0.83
TOP1-201ENST00000361337 SWAP70Q9UH65 585 aa9.89□□□□□ -0.83
TOP1-201ENST00000361337 NFS1Q9Y697 457 aa9.89□□□□□ -0.83
TOP1-201ENST00000361337 KCNK3O14649 394 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 KIF1CO43896 1103 aaKnown RBP9.88□□□□□ -0.83
TOP1-201ENST00000361337 RASSF9O75901 435 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 TDP2O95551 362 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 FAM107AO95990 144 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 ITGA4P13612 1032 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 PRPHP41219 470 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 PPP4CP60510 307 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 ZNF844Q08AG5 666 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 BYSLQ13895 437 aaKnown RBP9.88□□□□□ -0.83
TOP1-201ENST00000361337 NAB2Q15742 525 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 GLE1Q53GS7 698 aaKnown RBP9.88□□□□□ -0.83
TOP1-201ENST00000361337 DCAF15Q66K64 600 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 TPH2Q8IWU9 490 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 NELFCDQ8IXH7 590 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 ANKRD35Q8N283 1001 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 CHURC1Q8WUH1 139 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 RUBCNQ92622 972 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 TMBIM4Q9HC24 238 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 FAM198AQ9UFP1 575 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 BRWD3Q6RI45 1802 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 ANKRD62A6NC57 917 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 ASNSP08243 561 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 ACTN1P12814 892 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 RAPGEF1Q13905 1077 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 C16orf86Q6ZW13 317 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 SV2BQ7L1I2 683 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 USP38Q8NB14 1042 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 UBLCP1Q8WVY7 318 aaPredicted RBP9.88□□□□□ -0.83
TOP1-201ENST00000361337 DDX12PQ92771 950 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 AMNQ9BXJ7 453 aa9.88□□□□□ -0.83
TOP1-201ENST00000361337 RBAK-RBAKDNI3L0D1 243 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 TGFB2P61812 414 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 CD302Q8IX05 232 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 MREGQ8N565 214 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 TRPM4Q8TD43 1214 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 DDX47Q9H0S4 455 aaKnown RBP9.87□□□□□ -0.83
TOP1-201ENST00000361337 HAUS2Q9NVX0 235 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 SLC12A6Q9UHW9 1150 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 PHF20L1A8MW92 1017 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 PCP11498 1178 aaKnown RBP9.87□□□□□ -0.83
TOP1-201ENST00000361337 HSPA9P38646 679 aaKnown RBP9.87□□□□□ -0.83
TOP1-201ENST00000361337 MXRA7P84157 204 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 SYDE2Q5VT97 1194 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 SFMBT2Q5VUG0 894 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 DAGLBQ8NCG7 672 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 ARMC2Q8NEN0 867 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 MDM1Q8TC05 714 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 LARP4BQ92615 738 aaKnown RBP9.87□□□□□ -0.83
TOP1-201ENST00000361337 ZDHHC15Q96MV8 337 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 ZMYND12Q9H0C1 365 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 CUEDC2Q9H467 287 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 NPHP3-ACAD11A0A0J9YXS1 232 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 SSU72P8A0A1W2PR75 194 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 ZBED4O75132 1171 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 MYBP10242 640 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 SLC9C1Q4G0N8 1177 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 EMC10Q5UCC4 262 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 UNC13DQ70J99 1090 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 NEK8Q86SG6 692 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 TBC1D1Q86TI0 1168 aaPredicted RBP9.87□□□□□ -0.83
TOP1-201ENST00000361337 RNF10Q8N5U6 811 aaKnown RBP9.87□□□□□ -0.83
TOP1-201ENST00000361337 SAAL1Q96ER3 474 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 AK8Q96MA6 479 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 CELF4Q9BZC1 486 aaKnown RBP9.87□□□□□ -0.83
TOP1-201ENST00000361337 PCDHGC5Q9Y5F6 944 aa9.87□□□□□ -0.83
TOP1-201ENST00000361337 TRAF5O00463 557 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 HARSP12081 509 aaKnown RBP9.86□□□□□ -0.83
TOP1-201ENST00000361337 LMNB1P20700 586 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 FAM133BQ5BKY9 247 aaKnown RBP9.86□□□□□ -0.83
TOP1-201ENST00000361337 GPATCH4Q5T3I0 446 aaKnown RBP9.86□□□□□ -0.83
TOP1-201ENST00000361337 TAF1DQ9H5J8 278 aaPredicted RBP9.86□□□□□ -0.83
TOP1-201ENST00000361337 GGT7Q9UJ14 662 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 TMEM59LQ9UK28 342 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 FBXL5Q9UKA1 691 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 PCDHA12Q9UN75 941 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 ATXN2Q99700 1313 aaKnown RBP9.86□□□□□ -0.83
TOP1-201ENST00000361337 PALM3A6NDB9 673 aaPredicted RBP9.86□□□□□ -0.83
TOP1-201ENST00000361337 CEP104O60308 925 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 SHMT1P34896 483 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 CTNNA1P35221 906 aaKnown RBP9.86□□□□□ -0.83
TOP1-201ENST00000361337 SBK1Q52WX2 424 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 GUF1Q8N442 669 aaKnown RBP9.86□□□□□ -0.83
TOP1-201ENST00000361337 RDH13Q8NBN7 331 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 MGARPQ8TDB4 240 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 TAF4BQ92750 862 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 AMACRQ9UHK6 382 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 LOC285556D6RIA3 1793 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 HMGB1P1B2RPK0 211 aaPredicted RBP9.86□□□□□ -0.83
TOP1-201ENST00000361337 NFKBIEO00221 500 aa9.86□□□□□ -0.83
TOP1-201ENST00000361337 LAD1O00515 517 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms