RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 CDH2P19022 906 aaPredicted RBP14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 DNAJC24Q6P3W2 148 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 TAGAPQ8N103 731 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 ASZ1Q8WWH4 475 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 GJA10Q969M2 543 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 ORC4O43929 436 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 CCND2P30279 289 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 TFAP4Q01664 338 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 MAN2A1Q16706 1144 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 MRPS26Q9BYN8 205 aaKnown RBP14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 CCND1P24385 295 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 NR2F2P24468 414 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 CERKLQ49MI3 558 aaPredicted RBP14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 MFSD14BQ5SR56 506 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 SUGCTQ9HAC7 445 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 CCDC188H7C350 402 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 KRT7P08729 469 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 DAB2IPQ5VWQ8 1189 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 RFWD2Q8NHY2 731 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 CALN1Q9BXU9 219 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 CYP26B1Q9NR63 512 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 KAT6AQ92794 2004 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 IL10P22301 178 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 CRYMQ14894 314 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 LRRC31Q6UY01 552 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 ZNF654Q8IZM8 581 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 ZSWIM6Q9HCJ5 1215 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 RPRD1BQ9NQG5 326 aaKnown RBP14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 ABCA5Q8WWZ7 1642 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 CYP2C19P33261 490 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 KRT24Q2M2I5 525 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 LRRC8EQ6NSJ5 796 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 GRAMD1AQ96CP6 724 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 DBNDD2Q9BQY9 259 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 RWDD2AQ9UIY3 292 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 CHMP2BQ9UQN3 213 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 NDUFB9Q9Y6M9 179 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 PDE5AO76074 875 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 GFPT2O94808 682 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 TTC8Q8TAM2 541 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 EXT2Q93063 718 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 ZFYVE19Q96K21 471 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 DLGAP2Q9P1A6 1054 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 POLR3AO14802 1390 aaPredicted RBP14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 PPP6R2O75170 966 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 LAMC2Q13753 1193 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 FAM26FQ5R3K3 315 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 HIC2Q96JB3 615 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 GTSE1Q9NYZ3 720 aa14.05□□□□□ -0.16
SRGAP3-201ENST00000360413 SEMA3EO15041 775 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 TCF3P15923 654 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 ZNF658Q5TYW1 1059 aaPredicted RBP14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 ZNF555Q8NEP9 628 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 OMA1Q96E52 524 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 ZSCAN10Q96SZ4 725 aaPredicted RBP14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 PRMT1Q99873 361 aaKnown RBP14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 EML4Q9HC35 981 aaKnown RBP14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 LMTK3Q96Q04 1460 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 PMS2P54278 862 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 MECOMQ03112 1051 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 DMC1Q14565 340 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 TRADDQ15628 312 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 SZRD1Q7Z422 152 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 LUZP2Q86TE4 346 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 B4GALNT2Q8NHY0 566 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 CNKSR1Q969H4 720 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 PCDHA1Q9Y5I3 950 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 ERBB4Q15303 1308 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 TTC13Q8NBP0 860 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 CNBD2Q96M20 576 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 PCDHGB4Q9UN71 923 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 ZSCAN9O15535 394 aaPredicted RBP14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 KRT38O76015 456 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 SLC9A1P19634 815 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 COPS2P61201 443 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 ZBED6P86452 979 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 RABGAP1LQ5R372 815 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 TMED8Q6PL24 325 aaPredicted RBP14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 APOA5Q6Q788 366 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 P2RX5Q93086 422 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 ACCSQ96QU6 501 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 SEPT9Q9UHD8 586 aaPredicted RBP14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 AURKCQ9UQB9 309 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 DNAJC9Q8WXX5 260 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 ACAP3Q96P50 834 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 FAM129AQ9BZQ8 928 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 ADCY9O60503 1353 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 CCDC22O60826 627 aa14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 SAMSN1Q9NSI8 373 aaKnown RBP14.04□□□□□ -0.16
SRGAP3-201ENST00000360413 PI4K2BG5E9Z4 385 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 RHOBTB1O94844 696 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 PPP4R4Q6NUP7 873 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 PARVGQ9HBI0 331 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 NFKBIL1Q9UBC1 381 aaPredicted RBP14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 SYCP2Q9BX26 1530 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 SYNGAP1Q96PV0 1343 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 DLGAP3O95886 979 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 CAPN1P07384 714 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 CTCFP49711 727 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms