RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 ITGB1BP2Q9UKP3 347 aa18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 RNMTO43148 476 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 TRIM69Q86WT6 500 aa18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 TGS1Q96RS0 853 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 MLXIPLQ9NP71 852 aa18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 MLH1P40692 756 aa18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 SMAD5Q99717 465 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 SPDYE5A6NIY4 337 aa18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 TOMM70O94826 608 aa18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 SPDYE7PQ495Y7 208 aa18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 SPICE1Q8N0Z3 855 aa18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 DSCC1Q9BVC3 393 aa18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 MAGEB5Q9BZ81 275 aa18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 NDFIP2Q9NV92 336 aa18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 SYBUQ9NX95 663 aa18.43■□□□□ 0.54
CACNA1A-201ENST00000360228 CUL3Q13618 768 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 OLFML2BQ68BL8 750 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 PARVGQ9HBI0 331 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 RGL1Q9NZL6 768 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 ICA1Q05084 483 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 CNGA2Q16280 664 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 SCNN1DP51172 638 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 PSMD2Q13200 908 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 TRIP4Q15650 581 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 FBXO31Q5XUX0 539 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 ANKS3Q6ZW76 656 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 MEIS1O00470 390 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 RASSF9O75901 435 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 DDX5P17844 614 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 CASP8Q14790 479 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 SPDYAQ5MJ70 313 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 GPBP1L1Q9HC44 474 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 SLC30A9Q6PML9 568 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 MAGI1Q96QZ7 1491 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 MARK3P27448 753 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 PTPN21Q16825 1174 aa18.42■□□□□ 0.54
CACNA1A-201ENST00000360228 CMA1P23946 247 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 AFG1LQ8WV93 481 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 DNAJC7Q99615 494 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 PARVBQ9HBI1 364 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 ABCC12Q96J65 1359 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 ADCY9O60503 1353 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 USP17L12C9JPN9 530 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 USP17L21D6R901 530 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 KRT38O76015 456 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 UBXN2AP68543 259 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 ARHGEF25Q86VW2 580 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 CCDC103Q8IW40 242 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 NLRP4Q96MN2 994 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 GOLGA8IPA6NC78 632 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 ARL4CP56559 192 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 KRT77Q7Z794 578 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 WDR17Q8IZU2 1322 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 MFN1Q8IWA4 741 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 ANKRD49Q8WVL7 239 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 TRIM63Q969Q1 353 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 LAD1O00515 517 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 PODXLO00592 558 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 RAD23BP54727 409 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 ZNF274Q96GC6 653 aaPredicted RBP18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 NRBP1Q9UHY1 535 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 NUP93Q8N1F7 819 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 ACCSLQ4AC99 568 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 IYDQ6PHW0 289 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 SPTLC3Q9NUV7 552 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 EHD2Q9NZN4 543 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 SYCP2Q9BX26 1530 aa18.41■□□□□ 0.54
CACNA1A-201ENST00000360228 C5orf58C9J3I9 102 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 FGGP02679 453 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 CEBPAP49715 358 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 DPY19L2Q6NUT2 758 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 PKN3Q6P5Z2 889 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 KCTD1Q719H9 257 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 CHMP1BQ7LBR1 199 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 DHTKD1Q96HY7 919 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 BRD8Q9H0E9 1235 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 TMEM206Q9H813 350 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 AIPL1Q9NZN9 384 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 NPATQ14207 1427 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 TNNQ9UQP3 1299 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 FAM32AQ9Y421 112 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 SYNGAP1Q96PV0 1343 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 CD109Q6YHK3 1445 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 INPP5DQ92835 1189 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 PRDM5Q9NQX1 630 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 HNRNPRO43390 633 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 MAN2A1Q16706 1144 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 FAM96AQ9H5X1 160 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 NSMCE4AQ9NXX6 385 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 PCDHA7Q9UN72 937 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 NFIBO00712 420 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 VAMP4O75379 141 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 MYCP01106 439 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 SERPIND1P05546 499 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 GRK2P25098 689 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 ZNF790Q6PG37 636 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 ARL8AQ96BM9 186 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 SYNDIG1Q9H7V2 258 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 NGRNQ9NPE2 291 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms