RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 MCPH1Q8NEM0 835 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 PIGOQ8TEQ8 1089 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 KIFAP3Q92845 792 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 HVCN1Q96D96 273 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 FAM167AQ96KS9 214 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 CNOT6LQ96LI5 555 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 NAP1L5Q96NT1 182 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 UIMC1Q96RL1 719 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 TUBGCP2Q9BSJ2 902 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 NOC4LQ9BVI4 516 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 NRBP2Q9NSY0 501 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 TYW1Q9NV66 732 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 EXOC7Q9UPT5 735 aa11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 DIS3Q9Y2L1 958 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-201ENST00000359005 SOWAHBA6NEL2 793 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 LGALS16A8MUM7 142 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 BACH1O14867 736 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 ZSCAN12O43309 604 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 STX10O60499 249 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 GCNT3O95395 438 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 PGK1P00558 417 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 MYCNP04198 464 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 KCNA2P16389 499 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 EDNRBP24530 442 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 ADCYAP1R1P41586 468 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 ZNF131P52739 623 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 PSMC6P62333 389 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 MYBPC2Q14324 1141 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 LRRC41Q15345 812 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 NFIL3Q16649 462 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 MAN2A1Q16706 1144 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 HSP90AA4PQ58FG1 418 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 XKR3Q5GH77 459 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 DNTTIP2Q5QJE6 756 aaKnown RBP11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 ODR4Q5SWX8 454 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 TMEM63BQ5T3F8 832 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 MAMDC4Q6UXC1 1216 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 SFR1Q86XK3 245 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 ZNF507Q8TCN5 953 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 PCMTD1Q96MG8 357 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 PANX2Q96RD6 677 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 KATNBL1Q9H079 304 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 VPS16Q9H269 839 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 ZNHIT6Q9NWK9 470 aaKnown RBP11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 TRAF3IP3Q9Y228 551 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 PHLPP2Q6ZVD8 1323 aa11.83□□□□□ -0.52
TRAPPC4-201ENST00000359005 SMCHD1A6NHR9 2005 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 A0A0C4DFX4 3053 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 TRIM49BA6NDI0 452 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 MYADML2A6NDP7 307 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 DNM1LO00429 736 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 SLC16A3O15427 465 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 ARHGAP6O43182 974 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 MSCO60682 206 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 DGAT1O75907 488 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 EPB41P11171 864 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 MAGEA10P43363 369 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 SLC26A2P50443 739 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 RAD51AP2Q09MP3 1159 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 TBC1D8BQ0IIM8 1120 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 ADAM9Q13443 819 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 NOLC1Q14978 699 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 XKR9Q5GH70 373 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 KIAA1524Q8TCG1 905 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 CACTINQ8WUQ7 758 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 IFT74Q96LB3 600 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 MED15Q96RN5 788 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 DUSP9Q99956 384 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 JPH2Q9BR39 696 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 NUCKS1Q9H1E3 243 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 SEMA6BQ9H3T3 888 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 AZI2Q9H6S1 392 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 MLXIPQ9HAP2 919 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 ZNF302Q9NR11 478 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 TAB2Q9NYJ8 693 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 NRBP1Q9UHY1 535 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 PCDHA2Q9Y5H9 948 aa11.82□□□□□ -0.52
TRAPPC4-201ENST00000359005 NOP56O00567 594 aaKnown RBP11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 SUPT20HL2P0C7V6 817 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 PLS3P13797 630 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 RARRES1P49788 294 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 MARSP56192 900 aaKnown RBP11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 RTP1P59025 263 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 ACTR2P61160 394 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 TBX2Q13207 712 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 TTLL4Q14679 1199 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 PPP2R5AQ15172 486 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 CCDC144BQ3MJ40 725 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 VWA3BQ502W6 1294 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 SLC39A5Q6ZMH5 540 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 SEPT14Q6ZU15 432 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 EPM2AIP1Q7L775 607 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 FRMD5Q7Z6J6 570 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 USP37Q86T82 979 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 FMNL3Q8IVF7 1028 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 SYCP3Q8IZU3 236 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 TXLNBQ8N3L3 684 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 MSL3Q8N5Y2 521 aaKnown RBP11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 SCFD2Q8WU76 684 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms