RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 PSEN1P49768 467 aa17.48■□□□□ 0.39
PTPN5-201ENST00000358540 TUBB2AQ13885 445 aa17.48■□□□□ 0.39
PTPN5-201ENST00000358540 COG1Q8WTW3 980 aa17.48■□□□□ 0.39
PTPN5-201ENST00000358540 RIT2Q99578 217 aa17.48■□□□□ 0.39
PTPN5-201ENST00000358540 TUBB2BQ9BVA1 445 aa17.48■□□□□ 0.39
PTPN5-201ENST00000358540 K7ENM7 598 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 SP4Q02446 784 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 MAPK7Q13164 816 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 PGM5Q15124 567 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 RNF207Q6ZRF8 634 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 CCDC91Q7Z6B0 441 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 SYCP3Q8IZU3 236 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 EDEM3Q9BZQ6 932 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 PCIF1Q9H4Z3 704 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 GPRC5CQ9NQ84 441 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 ATAD5Q96QE3 1844 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 LCA5LO95447 670 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 LIG3P49916 1009 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 C2orf54Q08AI8 447 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 BAATQ14032 418 aaPredicted RBP17.47■□□□□ 0.39
PTPN5-201ENST00000358540 KLHDC7AQ5VTJ3 777 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 NLGN2Q8NFZ4 835 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 RBM46Q8TBY0 533 aaKnown RBP17.47■□□□□ 0.39
PTPN5-201ENST00000358540 ACBD3Q9H3P7 528 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 UBIAD1Q9Y5Z9 338 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 FER1L6Q2WGJ9 1857 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 A0A087WUV0 522 aaPredicted RBP17.47■□□□□ 0.39
PTPN5-201ENST00000358540 ZBED4O75132 1171 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 RPS12P25398 132 aaKnown RBP17.47■□□□□ 0.39
PTPN5-201ENST00000358540 PTPROQ16827 1216 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 PLA2G4FQ68DD2 849 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 DPY19L2P1Q6NXN4 242 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 TRIM58Q8NG06 486 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 AFAP1L1Q8TED9 768 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 RNF146Q9NTX7 359 aa17.47■□□□□ 0.39
PTPN5-201ENST00000358540 SSU72P8A0A1W2PR75 194 aa17.46■□□□□ 0.39
PTPN5-201ENST00000358540 VWA5AO00534 786 aa17.46■□□□□ 0.39
PTPN5-201ENST00000358540 MNAT1P51948 309 aa17.46■□□□□ 0.39
PTPN5-201ENST00000358540 PTK2Q05397 1052 aa17.46■□□□□ 0.39
PTPN5-201ENST00000358540 ARHGEF16Q5VV41 709 aa17.46■□□□□ 0.39
PTPN5-201ENST00000358540 PCNX4Q63HM2 1172 aa17.46■□□□□ 0.39
PTPN5-201ENST00000358540 SUGP1Q8IWZ8 645 aaKnown RBP17.46■□□□□ 0.39
PTPN5-201ENST00000358540 GBP3Q9H0R5 595 aa17.46■□□□□ 0.39
PTPN5-201ENST00000358540 AGPAT3Q9NRZ7 376 aa17.46■□□□□ 0.39
PTPN5-201ENST00000358540 PEX10O60683 326 aa17.46■□□□□ 0.39
PTPN5-201ENST00000358540 MATR3P43243 847 aaKnown RBP eCLIP17.46■□□□□ 0.39
PTPN5-201ENST00000358540 CCDC43Q96MW1 224 aaKnown RBP17.46■□□□□ 0.39
PTPN5-201ENST00000358540 TELO2Q9Y4R8 837 aa17.46■□□□□ 0.39
PTPN5-201ENST00000358540 MYH10P35580 1976 aa17.46■□□□□ 0.38
PTPN5-201ENST00000358540 EIF3DO15371 548 aaKnown RBP eCLIP17.45■□□□□ 0.38
PTPN5-201ENST00000358540 P4HBP07237 508 aaKnown RBP17.45■□□□□ 0.38
PTPN5-201ENST00000358540 ZNF131P52739 623 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 NPEPPSP55786 919 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 BACE1P56817 501 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 HS2ST1Q7LGA3 356 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 RABEP2Q9H5N1 569 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 MED4Q9NPJ6 270 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.45■□□□□ 0.38
PTPN5-201ENST00000358540 PICK1Q9NRD5 415 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 TCEAL9Q9UHQ7 104 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 RBBP6Q7Z6E9 1792 aaKnown RBP17.45■□□□□ 0.38
PTPN5-201ENST00000358540 KLRC1P26715 233 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 PSMC2P35998 433 aaKnown RBP17.45■□□□□ 0.38
PTPN5-201ENST00000358540 SNRNP48Q6IEG0 339 aaKnown RBP17.45■□□□□ 0.38
PTPN5-201ENST00000358540 GBP6Q6ZN66 633 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 ZNF571Q7Z3V5 609 aaPredicted RBP17.45■□□□□ 0.38
PTPN5-201ENST00000358540 GDAP1L1Q96MZ0 367 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 PDCD2LQ9BRP1 358 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 PACSIN2Q9UNF0 486 aaPredicted RBP17.45■□□□□ 0.38
PTPN5-201ENST00000358540 ERLIN2O94905 339 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 FTCDO95954 541 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 PTPRAP18433 802 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 SCYL3Q8IZE3 742 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 ZSWIM2Q8NEG5 633 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 RIN2Q8WYP3 895 aaPredicted RBP17.45■□□□□ 0.38
PTPN5-201ENST00000358540 CXorf56Q9H5V9 222 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 METTL14Q9HCE5 456 aaKnown RBP17.45■□□□□ 0.38
PTPN5-201ENST00000358540 SIX2Q9NPC8 291 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 PXMP2Q9NR77 195 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 GGA3Q9NZ52 723 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 SNX12Q9UMY4 172 aa17.45■□□□□ 0.38
PTPN5-201ENST00000358540 SLC16A3O15427 465 aaKnown RBP17.44■□□□□ 0.38
PTPN5-201ENST00000358540 CCNE2O96020 404 aa17.44■□□□□ 0.38
PTPN5-201ENST00000358540 RARRES1P49788 294 aa17.44■□□□□ 0.38
PTPN5-201ENST00000358540 KIAA0753Q2KHM9 967 aa17.44■□□□□ 0.38
PTPN5-201ENST00000358540 CBWD6Q4V339 395 aa17.44■□□□□ 0.38
PTPN5-201ENST00000358540 CBWD3Q5JTY5 395 aa17.44■□□□□ 0.38
PTPN5-201ENST00000358540 CBWD5Q5RIA9 395 aa17.44■□□□□ 0.38
PTPN5-201ENST00000358540 MSL3Q8N5Y2 521 aaKnown RBP17.44■□□□□ 0.38
PTPN5-201ENST00000358540 ZNF280CQ8ND82 737 aa17.44■□□□□ 0.38
PTPN5-201ENST00000358540 ALS2CR12Q96Q35 445 aa17.44■□□□□ 0.38
PTPN5-201ENST00000358540 NUCKS1Q9H1E3 243 aaKnown RBP17.44■□□□□ 0.38
PTPN5-201ENST00000358540 ODF2LQ9ULJ1 636 aa17.44■□□□□ 0.38
PTPN5-201ENST00000358540 FZD9O00144 591 aa17.44■□□□□ 0.38
PTPN5-201ENST00000358540 BACH1O14867 736 aa17.44■□□□□ 0.38
PTPN5-201ENST00000358540 EXOC3O60645 756 aa17.44■□□□□ 0.38
PTPN5-201ENST00000358540 BCRP11274 1271 aa17.44■□□□□ 0.38
PTPN5-201ENST00000358540 QARSP47897 775 aaKnown RBP17.44■□□□□ 0.38
PTPN5-201ENST00000358540 SLC18A3Q16572 532 aa17.44■□□□□ 0.38
PTPN5-201ENST00000358540 EP400NLQ6ZTU2 488 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms