RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 STIP1P31948 543 aaKnown RBP4.4□□□□□ -1.7
SYNE2-204ENST00000358025 ACADVLP49748 655 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 NLRP3Q96P20 1036 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 KANSL1LA0AUZ9 987 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 TRDMT1O14717 391 aaKnown RBP4.4□□□□□ -1.7
SYNE2-204ENST00000358025 CTDNEP1O95476 244 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 NAA20P61599 178 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 MAPK7Q13164 816 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 SNX1Q13596 522 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 KLHL7Q8IXQ5 586 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 RAB3IL1Q8TBN0 382 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 ZFP91Q96JP5 570 aaPredicted RBP4.4□□□□□ -1.7
SYNE2-204ENST00000358025 ETNK1Q9HBU6 452 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 SAMM50Q9Y512 469 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 TECPR2O15040 1411 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 KLHL41O60662 606 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 GTF2H1P32780 548 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 SLC7A5Q01650 507 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 CD209Q9NNX6 404 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 TTLL1O95922 423 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 CPA1P15085 419 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 RAD23BP54727 409 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 POLE2P56282 527 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 PDIK1LQ8N165 341 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 SYNPO2Q9UMS6 1093 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 KLRF2D3W0D1 207 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 ADAM9Q13443 819 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 ZCWPW2Q504Y3 356 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 PNKPQ96T60 521 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 STK38LQ9Y2H1 464 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 GOLGA4Q13439 2230 aaKnown RBP4.4□□□□□ -1.7
SYNE2-204ENST00000358025 ARHGEF35A5YM69 484 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 ITGA6P23229 1130 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 HSD17B3P37058 310 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 FAM69CQ0P6D2 419 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 LRRC8BQ6P9F7 803 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 PALM2Q8IXS6 379 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 GCOM2Q9BZD3 368 aaPredicted RBP4.4□□□□□ -1.7
SYNE2-204ENST00000358025 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.4□□□□□ -1.7
SYNE2-204ENST00000358025 COMMD3-BMI1R4GMX3 469 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 ATP5J2-PTCD1G3V325 749 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 PTCD1O75127 700 aaKnown RBP4.4□□□□□ -1.7
SYNE2-204ENST00000358025 TBXAS1P24557 533 aaPredicted RBP4.4□□□□□ -1.7
SYNE2-204ENST00000358025 CCNG2Q16589 344 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 TRMT44Q8IYL2 757 aaKnown RBP4.4□□□□□ -1.7
SYNE2-204ENST00000358025 SNF8Q96H20 258 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 FAXDC2Q96IV6 333 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 NAT9Q9BTE0 207 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 MAF1Q9H063 256 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 ATAD3AQ9NVI7 634 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 DIAPH2O60879 1101 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 ZC3H12AQ5D1E8 599 aaKnown RBP4.4□□□□□ -1.7
SYNE2-204ENST00000358025 ICA1LQ8NDH6 482 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 ADGRA3Q8IWK6 1321 aa4.4□□□□□ -1.7
SYNE2-204ENST00000358025 RASA4BC9J798 803 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 ENC1O14682 589 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 RASA4O43374 803 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 SYT2Q8N9I0 419 aaPredicted RBP4.4□□□□□ -1.71
SYNE2-204ENST00000358025 RBM41Q96IZ5 413 aaKnown RBP4.4□□□□□ -1.71
SYNE2-204ENST00000358025 CCDC85AQ96PX6 553 aaPredicted RBP4.4□□□□□ -1.71
SYNE2-204ENST00000358025 MFAP3P55082 362 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 CLEC4GQ6UXB4 293 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 IP6K2Q9UHH9 426 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 LEMD3Q9Y2U8 911 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 SNX17Q15036 470 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 FAR2Q96K12 515 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 FNBP1Q96RU3 617 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 ZNF277Q9NRM2 450 aaPredicted RBP4.4□□□□□ -1.71
SYNE2-204ENST00000358025 BLOC1S6Q9UL45 172 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 NEDD4P46934 1319 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 ABHD2P08910 425 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 GRK2P25098 689 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 RPL22P35268 128 aaKnown RBP4.4□□□□□ -1.71
SYNE2-204ENST00000358025 SERPINB9P50453 376 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 CCDC126Q96EE4 140 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 AGTPBP1Q9UPW5 1226 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 TTC4O95801 387 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 ARL4CP56559 192 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 TTC27Q6P3X3 843 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 TEKT4Q8WW24 435 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 LSM14BQ9BX40 385 aaKnown RBP4.4□□□□□ -1.71
SYNE2-204ENST00000358025 RAB20Q9NX57 234 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 TMOD2Q9NZR1 351 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 C15orf41Q9Y2V0 281 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 ZMYND10O75800 440 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 FDX1P10109 184 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 ACVR2BQ13705 512 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 MAPK6Q16659 721 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 HIF1AQ16665 826 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 ARMC3Q5W041 872 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 PROSER2Q86WR7 435 aaPredicted RBP4.4□□□□□ -1.71
SYNE2-204ENST00000358025 RSAD2Q8WXG1 361 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 CLIC6Q96NY7 704 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 C1orf50Q9BV19 199 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 QRICH2Q9H0J4 1663 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 CHD2O14647 1828 aaKnown RBP4.4□□□□□ -1.71
SYNE2-204ENST00000358025 ATP1A1P05023 1023 aaKnown RBP4.4□□□□□ -1.71
SYNE2-204ENST00000358025 GRAMD4Q6IC98 578 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 TUFT1Q9NNX1 390 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 ZAP70P43403 619 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms