RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 CALN1Q9BXU9 219 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 MRPS26Q9BYN8 205 aaKnown RBP13.7□□□□□ -0.22
SMC4-202ENST00000357388 MPP6Q9NZW5 540 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 ATP10DQ9P241 1426 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 DDX5P17844 614 aaKnown RBP13.7□□□□□ -0.22
SMC4-202ENST00000357388 CYP2C19P33261 490 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 HSPA9P38646 679 aaKnown RBP13.7□□□□□ -0.22
SMC4-202ENST00000357388 KRT33BQ14525 404 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 ZNF555Q8NEP9 628 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 CMTM5Q96DZ9 223 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 BRIP1Q9BX63 1249 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 PDP2Q9P2J9 529 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 ABT1Q9ULW3 272 aaKnown RBP13.7□□□□□ -0.22
SMC4-202ENST00000357388 BRAFP15056 766 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 KIF23Q02241 960 aaPredicted RBP13.69□□□□□ -0.22
SMC4-202ENST00000357388 CNGA3Q16281 694 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 SIX6OS1Q8N1H7 587 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 NSUN7Q8NE18 718 aaKnown RBP13.69□□□□□ -0.22
SMC4-202ENST00000357388 RAPGEF5Q92565 580 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 MXD3Q9BW11 206 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 OSBPL3Q9H4L5 887 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 PSD3Q9NYI0 1048 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.69□□□□□ -0.22
SMC4-202ENST00000357388 ASAP2O43150 1006 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 ANP32DO95626 131 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 SMARCA1P28370 1054 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 PMLP29590 882 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 ARL13BQ3SXY8 428 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 PLD3Q8IV08 490 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 QTRT2Q9H974 415 aaKnown RBP13.69□□□□□ -0.22
SMC4-202ENST00000357388 ADA2Q9NZK5 511 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 PRR23D1E9PI22 279 aaPredicted RBP13.69□□□□□ -0.22
SMC4-202ENST00000357388 PRR23D2P0DMB1 279 aaPredicted RBP13.69□□□□□ -0.22
SMC4-202ENST00000357388 RXRBP28702 533 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 GYS2P54840 703 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 SEMA3FQ13275 785 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 TRIP13Q15645 432 aaPredicted RBP13.69□□□□□ -0.22
SMC4-202ENST00000357388 SPATA21Q7Z572 469 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 LZICQ8WZA0 190 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 PPCSQ9HAB8 311 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 ATP6V0A4Q9HBG4 840 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 UBE2TQ9NPD8 197 aaPredicted RBP13.69□□□□□ -0.22
SMC4-202ENST00000357388 MAP3K15Q6ZN16 1313 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 KCNA3P22001 575 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 PGM1P36871 562 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 DYNLT1P63172 113 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 CAPRIN1Q14444 709 aaKnown RBP13.69□□□□□ -0.22
SMC4-202ENST00000357388 TBCCQ15814 346 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 POTEAQ6S8J7 498 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 ZBED2Q9BTP6 218 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 RAPGEF6Q8TEU7 1601 aa13.69□□□□□ -0.22
SMC4-202ENST00000357388 ATP10BO94823 1461 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 HSPA13P48723 471 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 USPL1Q5W0Q7 1092 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 COG1Q8WTW3 980 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 SAMSN1Q9NSI8 373 aaKnown RBP13.68□□□□□ -0.22
SMC4-202ENST00000357388 LZTS1Q9Y250 596 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 THOC2Q8NI27 1593 aaKnown RBP13.68□□□□□ -0.22
SMC4-202ENST00000357388 PHKG2P15735 406 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 MXI1P50539 228 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 ARL6IP4Q66PJ3 421 aaKnown RBP13.68□□□□□ -0.22
SMC4-202ENST00000357388 SNX19Q92543 992 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 YEATS2Q9ULM3 1422 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 SNX2O60749 519 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 AGTP01019 485 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 C4BPBP20851 252 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 DHX34Q14147 1143 aaKnown RBP13.68□□□□□ -0.22
SMC4-202ENST00000357388 TRADDQ15628 312 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 ADRM1Q16186 407 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 FAM160B2Q86V87 743 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 OLA1Q9NTK5 396 aaKnown RBP13.68□□□□□ -0.22
SMC4-202ENST00000357388 IL1RAPL1Q9NZN1 696 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 SNX24Q9Y343 169 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 ARHGAP31Q2M1Z3 1444 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 PPP1R37O75864 691 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 GUCY1A3Q02108 690 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 KRT31Q15323 416 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 SDR42E1Q8WUS8 393 aa13.68□□□□□ -0.22
SMC4-202ENST00000357388 LOC102724428A0A0B4J2F2 783 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 PALMO75781 387 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 GOLGA8HP0CJ92 632 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 DDIT3P35638 169 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 ARPP19P56211 112 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 SIK1P57059 783 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 RAB14P61106 215 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 ABCE1P61221 599 aaKnown RBP13.67□□□□□ -0.22
SMC4-202ENST00000357388 CYP4A11Q02928 519 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 LUZP2Q86TE4 346 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 SYBUQ9NX95 663 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 GTSE1Q9NYZ3 720 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 SMG5Q9UPR3 1016 aaKnown RBP13.67□□□□□ -0.22
SMC4-202ENST00000357388 GOLGA8SH3BPF8 625 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 MMP1P03956 469 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 RECQLP46063 649 aaPredicted RBP13.67□□□□□ -0.22
SMC4-202ENST00000357388 OTUB1Q96FW1 271 aaPredicted RBP13.67□□□□□ -0.22
SMC4-202ENST00000357388 CEP170P1Q96L14 293 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 NR1H4Q96RI1 486 aaPredicted RBP13.67□□□□□ -0.22
SMC4-202ENST00000357388 FTOQ9C0B1 505 aaKnown RBP eCLIP13.67□□□□□ -0.22
SMC4-202ENST00000357388 GOLPH3LQ9H4A5 285 aa13.67□□□□□ -0.22
SMC4-202ENST00000357388 GPR108Q9NPR9 543 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms