RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 LRRC1Q9BTT6 524 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 JADE2Q9NQC1 790 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 SLC45A1Q9Y2W3 748 aa13.88□□□□□ -0.19
RTFDC1-202ENST00000357348 PJA2O43164 708 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 KLK7P49862 253 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 ORC2Q13416 577 aaPredicted RBP13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 PCNX4Q63HM2 1172 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 MOXD1Q6UVY6 613 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 CABP7Q86V35 215 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 CSGALNACT2Q8N6G5 542 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 HDAC7Q8WUI4 952 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 ZNF577Q9BSK1 485 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 KCNH7Q9NS40 1196 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 PLXNB2O15031 1838 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 SOWAHBA6NEL2 793 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 MEIS1O00470 390 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 ZEB2O60315 1214 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 USO1O60763 962 aaKnown RBP13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 FCER1AP12319 257 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 MTMR1Q13613 665 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 GLE1Q53GS7 698 aaKnown RBP13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 HAUS3Q68CZ6 603 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 MICALL1Q8N3F8 863 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 CCDC155Q8N6L0 562 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 LRRC15Q8TF66 581 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 KAT2BQ92831 832 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 CNOT6LQ96LI5 555 aaKnown RBP13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 OSBPL9Q96SU4 736 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 HYOU1Q9Y4L1 999 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 CAPN6Q9Y6Q1 641 aa13.87□□□□□ -0.19
RTFDC1-202ENST00000357348 PFASO15067 1338 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 MACROD2A1Z1Q3 448 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 ERLIN2O94905 339 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 GCLCP48506 637 aaPredicted RBP13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 CYP27A1Q02318 531 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 SPA17Q15506 151 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 DEFB115Q30KQ5 88 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 TTMPQ5BVD1 217 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 LRCH2Q5VUJ6 765 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 C1orf131Q8NDD1 294 aaKnown RBP13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 BCAS4Q8TDM0 211 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 SNX29Q8TEQ0 813 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 CCDC42Q96M95 316 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 C7orf25Q9BPX7 421 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 MMTAG2Q9BU76 263 aaKnown RBP13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 ARHGAP20Q9P2F6 1191 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 SIK3Q9Y2K2 1263 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 PCDHA13Q9Y5I0 950 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 IPO5O00410 1097 aaKnown RBP13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 ATP9AO75110 1047 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 CCND2P30279 289 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 FXR2P51116 673 aaKnown RBP eCLIP13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 ALDH5A1P51649 535 aaPredicted RBP13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 GNGT1P63211 74 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 CCNA1P78396 465 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 ANKRD40Q6AI12 368 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 VSIG10LQ86VR7 867 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 SLFN12Q8IYM2 578 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 SAMD3Q8N6K7 520 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 TSEN2Q8NCE0 465 aaKnown RBP13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 DEF6Q9H4E7 631 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 MROH8Q9H579 483 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 BCAS3Q9H6U6 928 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 STIM2Q9P246 746 aa13.86□□□□□ -0.19
RTFDC1-202ENST00000357348 GAS7O60861 476 aa13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 RGS20O76081 388 aa13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 APBA1Q02410 837 aa13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 SP4Q02446 784 aa13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 CYP4A11Q02928 519 aa13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 CRHR2Q13324 411 aa13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 ECM1Q16610 540 aa13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 SEPT14Q6ZU15 432 aa13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 TRMT1LQ7Z2T5 733 aaKnown RBP13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 SPATS2Q86XZ4 545 aaKnown RBP13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 CD302Q8IX05 232 aa13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 CAPNS2Q96L46 248 aa13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 RAB34Q9BZG1 259 aa13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 UBIAD1Q9Y5Z9 338 aa13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 PLXNA1Q9UIW2 1896 aa13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 FRMPD4Q14CM0 1322 aa13.85□□□□□ -0.19
RTFDC1-202ENST00000357348 EML1O00423 815 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 PES1O00541 588 aaKnown RBP13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 PLCG1P19174 1290 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 ADORA2AP29274 412 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 APLP1P51693 650 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 SREBF2Q12772 1141 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 KRT79Q5XKE5 535 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 TEX2Q8IWB9 1127 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 CNPY4Q8N129 248 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 MREGQ8N565 214 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 FAM133AQ8N9E0 248 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 GTF3C2Q8WUA4 911 aaPredicted RBP13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 ARL8AQ96BM9 186 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 AK8Q96MA6 479 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 NOC4LQ9BVI4 516 aaKnown RBP13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 IFIH1Q9BYX4 1025 aaKnown RBP13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 TRIM9Q9C026 710 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 GDF3Q9NR23 364 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 RNF14Q9UBS8 474 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 IVNS1ABPQ9Y6Y0 642 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms