RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 RAPGEFL1Q9UHV5 662 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 PUF60Q9UHX1 559 aaKnown RBP12.01□□□□□ -0.49
CAPN3-204ENST00000356316 KIAA1671Q9BY89 1806 aa12□□□□□ -0.49
CAPN3-204ENST00000356316 MARCH6O60337 910 aa12□□□□□ -0.49
CAPN3-204ENST00000356316 DNAJB1P25685 340 aa12□□□□□ -0.49
CAPN3-204ENST00000356316 LTBRP36941 435 aa12□□□□□ -0.49
CAPN3-204ENST00000356316 NRIP1P48552 1158 aa12□□□□□ -0.49
CAPN3-204ENST00000356316 PRKCEQ02156 737 aa12□□□□□ -0.49
CAPN3-204ENST00000356316 ADAM15Q13444 863 aa12□□□□□ -0.49
CAPN3-204ENST00000356316 NONOQ15233 471 aaKnown RBP eCLIP12□□□□□ -0.49
CAPN3-204ENST00000356316 PDE12Q6L8Q7 609 aaKnown RBP12□□□□□ -0.49
CAPN3-204ENST00000356316 RBM23Q86U06 439 aaKnown RBP12□□□□□ -0.49
CAPN3-204ENST00000356316 ADHFE1Q8IWW8 467 aa12□□□□□ -0.49
CAPN3-204ENST00000356316 LRRC71Q8N4P6 559 aa12□□□□□ -0.49
CAPN3-204ENST00000356316 NLRP7Q8WX94 980 aa12□□□□□ -0.49
CAPN3-204ENST00000356316 KHSRPQ92945 711 aaKnown RBP eCLIP12□□□□□ -0.49
CAPN3-204ENST00000356316 UNC45AQ9H3U1 944 aa12□□□□□ -0.49
CAPN3-204ENST00000356316 TYW1Q9NV66 732 aaKnown RBP12□□□□□ -0.49
CAPN3-204ENST00000356316 SEPT9Q9UHD8 586 aaPredicted RBP12□□□□□ -0.49
CAPN3-204ENST00000356316 CD207Q9UJ71 328 aa12□□□□□ -0.49
CAPN3-204ENST00000356316 FNDC1Q4ZHG4 1894 aaPredicted RBP12□□□□□ -0.49
CAPN3-204ENST00000356316 CYP3A7-CYP3A51PA0A087WV96 503 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 CCDC194A0A1B0GVG4 234 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 FSD2A1L4K1 749 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 FAM86C2PA6NEL3 165 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 DDX11L8A8MPP1 907 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 MBTPS2O43462 519 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 ZNF862O60290 1169 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 DKC1O60832 514 aaKnown RBP eCLIP11.99□□□□□ -0.49
CAPN3-204ENST00000356316 PSMD10O75832 226 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 FGF18O76093 207 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 LAG3P18627 525 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 CYP3A7P24462 503 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 GTF2F1P35269 517 aaKnown RBP eCLIP11.99□□□□□ -0.49
CAPN3-204ENST00000356316 KRT17Q04695 432 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 DLX2Q07687 328 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-204ENST00000356316 SMAD4Q13485 552 aaKnown RBP11.99□□□□□ -0.49
CAPN3-204ENST00000356316 CAMK1Q14012 370 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 SMAD2Q15796 467 aaKnown RBP11.99□□□□□ -0.49
CAPN3-204ENST00000356316 MTERF2Q49AM1 385 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 XKR3Q5GH77 459 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 KRT25Q7Z3Z0 450 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 EFHBQ8N7U6 833 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 RNF169Q8NCN4 708 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 GJA10Q969M2 543 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 NIFKQ9BYG3 293 aaKnown RBP11.99□□□□□ -0.49
CAPN3-204ENST00000356316 GCOM2Q9BZD3 368 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-204ENST00000356316 TMEM117Q9H0C3 514 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 ADAMTS10Q9H324 1103 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 TLR9Q9NR96 1032 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 DACT1Q9NYF0 836 aa11.99□□□□□ -0.49
CAPN3-204ENST00000356316 DDX25Q9UHL0 483 aaKnown RBP11.99□□□□□ -0.49
CAPN3-204ENST00000356316 ATG2AQ2TAZ0 1938 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 PLXNA4Q9HCM2 1894 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 LINC01565O15544 149 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 DCXO43602 365 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 GABBR2O75899 941 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 TDP2O95551 362 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 EOMESO95936 686 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 SRGAP2BP0DMP2 458 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 FGFR1P11362 822 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 IRS1P35568 1242 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 GPC3P51654 580 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 ZP2Q05996 745 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 DSC3Q14574 896 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 UGCGQ16739 394 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 LETM2Q2VYF4 491 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 MOXD1Q6UVY6 613 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 ADGRD2Q7Z7M1 963 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 COLGALT1Q8NBJ5 622 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 DAGLBQ8NCG7 672 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 ZNF668Q96K58 619 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-204ENST00000356316 NAP1L4Q99733 375 aaKnown RBP11.98□□□□□ -0.49
CAPN3-204ENST00000356316 JPH2Q9BR39 696 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-204ENST00000356316 INO80BQ9C086 356 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-204ENST00000356316 BRWD1Q9NSI6 2320 aa11.98□□□□□ -0.49
CAPN3-204ENST00000356316 PRR33A8MZF0 331 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 PER2O15055 1255 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 EDIL3O43854 480 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 TBX10O75333 385 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 DARSP14868 501 aaKnown RBP11.97□□□□□ -0.49
CAPN3-204ENST00000356316 PLA2G5P39877 138 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 PSMC5P62195 406 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 BMS1Q14692 1282 aaKnown RBP11.97□□□□□ -0.49
CAPN3-204ENST00000356316 ANKRD1Q15327 319 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 INF2Q27J81 1249 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 ECHDC2Q86YB7 292 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 EXOC8Q8IYI6 725 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 LINC01465Q8N7H1 131 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 WASF1Q92558 559 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 FAM20AQ96MK3 541 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 ZNF558Q96NG5 402 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 CDCA3Q99618 268 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-204ENST00000356316 CHST12Q9NRB3 414 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 CIZ1Q9ULV3 898 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-204ENST00000356316 KCNJ14Q9UNX9 436 aa11.97□□□□□ -0.49
CAPN3-204ENST00000356316 ARIH1Q9Y4X5 557 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-204ENST00000356316 A0A0U1RQF3 1178 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 M0R2N6 131 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 CCNT1O60563 726 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms