RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 HEMGNQ9BXL5 484 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 DTNAQ9Y4J8 743 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 TRPM2O94759 1503 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 TOPBP1Q92547 1522 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 MAGEB5Q9BZ81 275 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 MAPK13O15264 365 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 SUPT3HO75486 399 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 LCP1P13796 627 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 SYTL3Q4VX76 610 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 RC3H1Q5TC82 1133 aaKnown RBP18.38■□□□□ 0.53
COL27A1-201ENST00000356083 MLXIPLQ9NP71 852 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 FGAP02671 866 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 NEK2P51955 445 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 COPB1P53618 953 aaKnown RBP18.38■□□□□ 0.53
COL27A1-201ENST00000356083 FASTKD1Q53R41 847 aaKnown RBP18.38■□□□□ 0.53
COL27A1-201ENST00000356083 FGD2Q7Z6J4 655 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 RASSF3Q86WH2 238 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 STK17AQ9UEE5 414 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 JRKLQ9Y4A0 524 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 PRRG1O14668 218 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 NCALDP61601 193 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 ST8SIA6P61647 398 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 DYNLL1P63167 89 aaKnown RBP18.38■□□□□ 0.53
COL27A1-201ENST00000356083 ZNF699Q32M78 642 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 FBXW10Q5XX13 1052 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 LRRC8EQ6NSJ5 796 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 C16orf62Q7Z3J2 963 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 SLC35F6Q8N357 371 aa18.38■□□□□ 0.53
COL27A1-201ENST00000356083 E4F1Q66K89 784 aaPredicted RBP18.37■□□□□ 0.53
COL27A1-201ENST00000356083 RIMS2Q9UQ26 1411 aa18.37■□□□□ 0.53
COL27A1-201ENST00000356083 RALGAPBQ86X10 1494 aa18.37■□□□□ 0.53
COL27A1-201ENST00000356083 C5orf58C9J3I9 102 aa18.37■□□□□ 0.53
COL27A1-201ENST00000356083 KCNA2P16389 499 aa18.37■□□□□ 0.53
COL27A1-201ENST00000356083 ERFP50548 548 aa18.37■□□□□ 0.53
COL27A1-201ENST00000356083 PDIK1LQ8N165 341 aa18.37■□□□□ 0.53
COL27A1-201ENST00000356083 NUP93Q8N1F7 819 aa18.37■□□□□ 0.53
COL27A1-201ENST00000356083 TMEM206Q9H813 350 aa18.37■□□□□ 0.53
COL27A1-201ENST00000356083 ASPRV1Q53RT3 343 aa18.37■□□□□ 0.53
COL27A1-201ENST00000356083 SYCP2LQ5T4T6 812 aa18.37■□□□□ 0.53
COL27A1-201ENST00000356083 AURKCQ9UQB9 309 aa18.37■□□□□ 0.53
COL27A1-201ENST00000356083 COPG1Q9Y678 874 aaKnown RBP18.37■□□□□ 0.53
COL27A1-201ENST00000356083 H2AFY2Q9P0M6 372 aaPredicted RBP18.37■□□□□ 0.53
COL27A1-201ENST00000356083 PCSK1NQ9UHG2 260 aa18.37■□□□□ 0.53
COL27A1-201ENST00000356083 ANAPC7Q9UJX3 599 aa18.37■□□□□ 0.53
COL27A1-201ENST00000356083 INPP5DQ92835 1189 aa18.37■□□□□ 0.53
COL27A1-201ENST00000356083 SAYSD1Q9NPB0 183 aa18.37■□□□□ 0.53
COL27A1-201ENST00000356083 TLR2O60603 784 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 CHRNA3P32297 505 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 CSE1LP55060 971 aaKnown RBP18.36■□□□□ 0.53
COL27A1-201ENST00000356083 ARMC6Q6NXE6 501 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 YY1AP1Q9H869 796 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 PAPOLBQ9NRJ5 636 aaKnown RBP18.36■□□□□ 0.53
COL27A1-201ENST00000356083 PPIEQ9UNP9 301 aaKnown RBP18.36■□□□□ 0.53
COL27A1-201ENST00000356083 APOBEC2Q9Y235 224 aaKnown RBP18.36■□□□□ 0.53
COL27A1-201ENST00000356083 COPEO14579 308 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 WDR47O94967 919 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 FAM196AQ6ZSG2 479 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 MARCH10Q8NA82 808 aaPredicted RBP18.36■□□□□ 0.53
COL27A1-201ENST00000356083 FAM161BQ96MY7 647 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 ADNPQ9H2P0 1102 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 MEFVO15553 781 aaPredicted RBP18.36■□□□□ 0.53
COL27A1-201ENST00000356083 SPAG7O75391 227 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 NUMBP49757 651 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 CYFIP1Q7L576 1253 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 TRIM33Q9UPN9 1127 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 MED23Q9ULK4 1368 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 ITSN2Q9NZM3 1697 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 C21orf2O43822 256 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 DHX9Q08211 1270 aaKnown RBP18.36■□□□□ 0.53
COL27A1-201ENST00000356083 DCTN4Q9UJW0 460 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 MKL2Q9ULH7 1088 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 PNMA8BQ9ULN7 279 aaPredicted RBP18.36■□□□□ 0.53
COL27A1-201ENST00000356083 C2CD2LO14523 706 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 CASP14P31944 242 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 PHKG1Q16816 387 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 MMS22LQ6ZRQ5 1243 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 CCDC51Q96ER9 411 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 HES6Q96HZ4 224 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 KCNQ3O43525 872 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 MXI1P50539 228 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 SDE2Q6IQ49 451 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 TRIM48Q8IWZ4 208 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 BTBD6Q96KE9 485 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 MYO18AQ92614 2054 aaKnown RBP18.36■□□□□ 0.53
COL27A1-201ENST00000356083 ZNF667Q5HYK9 610 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 WDR11Q9BZH6 1224 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 LZTS1Q9Y250 596 aa18.36■□□□□ 0.53
COL27A1-201ENST00000356083 ADGRA2Q96PE1 1338 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 KIF28PB7ZC32 967 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 ADORA2BP29275 332 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 C16orf72Q14CZ0 275 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 VN1R5Q7Z5H4 357 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 GRAMD1CQ8IYS0 662 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 RERGLQ9H628 205 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 MAP3K19Q56UN5 1328 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 ATP9BO43861 1147 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 GPATCH4Q5T3I0 446 aaKnown RBP18.35■□□□□ 0.53
COL27A1-201ENST00000356083 TADA2AO75478 443 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 GAP43P17677 238 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 COPB2P35606 906 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms