RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 CEP72Q9P209 647 aa28.16■■■□□ 2.1
CLK2-201ENST00000355560 DGAT1O75907 488 aa28.15■■■□□ 2.1
CLK2-201ENST00000355560 NOL4O94818 638 aa28.15■■■□□ 2.1
CLK2-201ENST00000355560 GNG11P61952 73 aa28.15■■■□□ 2.1
CLK2-201ENST00000355560 FKBP1BP68106 108 aa28.15■■■□□ 2.1
CLK2-201ENST00000355560 GTF2BQ00403 316 aa28.15■■■□□ 2.1
CLK2-201ENST00000355560 CDK17Q00537 523 aa28.15■■■□□ 2.1
CLK2-201ENST00000355560 DMP1Q13316 513 aaPredicted RBP28.15■■■□□ 2.1
CLK2-201ENST00000355560 XKR3Q5GH77 459 aa28.15■■■□□ 2.1
CLK2-201ENST00000355560 NHEJ1Q9H9Q4 299 aaPredicted RBP28.15■■■□□ 2.1
CLK2-201ENST00000355560 RRAGCQ9HB90 399 aa28.15■■■□□ 2.1
CLK2-201ENST00000355560 FRMD4BQ9Y2L6 1034 aa28.15■■■□□ 2.1
CLK2-201ENST00000355560 FANCGO15287 622 aa28.15■■■□□ 2.1
CLK2-201ENST00000355560 NEDD9Q14511 834 aa28.15■■■□□ 2.1
CLK2-201ENST00000355560 SLC17A8Q8NDX2 589 aa28.15■■■□□ 2.1
CLK2-201ENST00000355560 GTF3C2Q8WUA4 911 aaPredicted RBP28.15■■■□□ 2.1
CLK2-201ENST00000355560 KIFAP3Q92845 792 aa28.15■■■□□ 2.1
CLK2-201ENST00000355560 PORCNQ9H237 461 aa28.15■■■□□ 2.1
CLK2-201ENST00000355560 MAFBQ9Y5Q3 323 aaPredicted RBP28.15■■■□□ 2.1
CLK2-201ENST00000355560 CCL15-CCL14A0A0B4J2E2 113 aa28.14■■■□□ 2.1
CLK2-201ENST00000355560 PDHXO00330 501 aa28.14■■■□□ 2.1
CLK2-201ENST00000355560 TGFB3P10600 412 aa28.14■■■□□ 2.1
CLK2-201ENST00000355560 GTF2A2P52657 109 aa28.14■■■□□ 2.1
CLK2-201ENST00000355560 CCL15Q16663 113 aa28.14■■■□□ 2.1
CLK2-201ENST00000355560 ARHGAP29Q52LW3 1261 aa28.14■■■□□ 2.1
CLK2-201ENST00000355560 SLC9A9Q8IVB4 645 aa28.14■■■□□ 2.1
CLK2-201ENST00000355560 NLRC4Q9NPP4 1024 aa28.14■■■□□ 2.1
CLK2-201ENST00000355560 REXO2Q9Y3B8 237 aaKnown RBP28.14■■■□□ 2.1
CLK2-201ENST00000355560 CCDC169A6NNP5 214 aa28.13■■■□□ 2.09
CLK2-201ENST00000355560 CYLC1P35663 651 aaPredicted RBP28.13■■■□□ 2.09
CLK2-201ENST00000355560 SMTNP53814 917 aa28.13■■■□□ 2.09
CLK2-201ENST00000355560 SOX10P56693 466 aa28.13■■■□□ 2.09
CLK2-201ENST00000355560 APBA1Q02410 837 aa28.13■■■□□ 2.09
CLK2-201ENST00000355560 PDXDC1Q6P996 788 aa28.13■■■□□ 2.09
CLK2-201ENST00000355560 MCPH1Q8NEM0 835 aa28.13■■■□□ 2.09
CLK2-201ENST00000355560 SHCBP1Q8NEM2 672 aa28.13■■■□□ 2.09
CLK2-201ENST00000355560 EFCC1Q9HA90 598 aa28.13■■■□□ 2.09
CLK2-201ENST00000355560 ZNFX1Q9P2E3 1918 aaKnown RBP28.13■■■□□ 2.09
CLK2-201ENST00000355560 NPTX2P47972 431 aa28.13■■■□□ 2.09
CLK2-201ENST00000355560 POLR2FP61218 127 aaKnown RBP28.13■■■□□ 2.09
CLK2-201ENST00000355560 MTERF2Q49AM1 385 aa28.13■■■□□ 2.09
CLK2-201ENST00000355560 CCDC170Q8IYT3 715 aa28.13■■■□□ 2.09
CLK2-201ENST00000355560 WDR24Q96S15 920 aa28.13■■■□□ 2.09
CLK2-201ENST00000355560 KIFC3Q9BVG8 833 aa28.13■■■□□ 2.09
CLK2-201ENST00000355560 ATP6V0A4Q9HBG4 840 aa28.13■■■□□ 2.09
CLK2-201ENST00000355560 MCM3APO60318 1980 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 TISP43B9A030 160 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 BTBD19C9JJ37 291 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 SOCS7O14512 581 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 EXOC3O60645 756 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 GGPS1O95749 300 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 ATP4AP20648 1035 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 LY6KQ17RY6 165 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 BSNDQ8WZ55 320 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 IRX2Q9BZI1 471 aaPredicted RBP28.12■■■□□ 2.09
CLK2-201ENST00000355560 C17orf75Q9HAS0 396 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 XPNPEP1Q9NQW7 623 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 IGKV6D-21A0A0A0MT36 114 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 OATP04181 439 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 MYBPC2Q14324 1141 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 METTL7BQ6UX53 244 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 TMEM161BQ8NDZ6 487 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 GPRC5AQ8NFJ5 357 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 PDLIM7Q9NR12 457 aa28.12■■■□□ 2.09
CLK2-201ENST00000355560 CELF2O95319 508 aaKnown RBP28.11■■■□□ 2.09
CLK2-201ENST00000355560 PLEKP08567 350 aaPredicted RBP28.11■■■□□ 2.09
CLK2-201ENST00000355560 EXOC3L4Q17RC7 722 aa28.11■■■□□ 2.09
CLK2-201ENST00000355560 BRI3BPQ8WY22 251 aa28.11■■■□□ 2.09
CLK2-201ENST00000355560 KMT5AQ9NQR1 393 aa28.11■■■□□ 2.09
CLK2-201ENST00000355560 ARHGAP20Q9P2F6 1191 aa28.11■■■□□ 2.09
CLK2-201ENST00000355560 SLC45A1Q9Y2W3 748 aa28.11■■■□□ 2.09
CLK2-201ENST00000355560 GSTTP1A0A1W2PQM5 241 aa28.1■■■□□ 2.09
CLK2-201ENST00000355560 ARIH2O95376 493 aa28.1■■■□□ 2.09
CLK2-201ENST00000355560 ANKRD13CQ8N6S4 541 aa28.1■■■□□ 2.09
CLK2-201ENST00000355560 C2orf69Q8N8R5 385 aa28.1■■■□□ 2.09
CLK2-201ENST00000355560 GANQ9H2C0 597 aa28.1■■■□□ 2.09
CLK2-201ENST00000355560 CGNQ9P2M7 1197 aaKnown RBP28.1■■■□□ 2.09
CLK2-201ENST00000355560 DYNC1I1O14576 645 aa28.1■■■□□ 2.09
CLK2-201ENST00000355560 SLC9A1P19634 815 aa28.1■■■□□ 2.09
CLK2-201ENST00000355560 GPIHBP1Q8IV16 184 aa28.1■■■□□ 2.09
CLK2-201ENST00000355560 SPIRE2Q8WWL2 714 aa28.1■■■□□ 2.09
CLK2-201ENST00000355560 CCDC42Q96M95 316 aa28.1■■■□□ 2.09
CLK2-201ENST00000355560 CBWD1Q9BRT8 395 aa28.1■■■□□ 2.09
CLK2-201ENST00000355560 PCIF1Q9H4Z3 704 aa28.1■■■□□ 2.09
CLK2-201ENST00000355560 MLXIPQ9HAP2 919 aa28.1■■■□□ 2.09
CLK2-201ENST00000355560 KIF5CO60282 957 aa28.09■■■□□ 2.09
CLK2-201ENST00000355560 IPO7O95373 1038 aaKnown RBP28.09■■■□□ 2.09
CLK2-201ENST00000355560 POLGP54098 1239 aaPredicted RBP28.09■■■□□ 2.09
CLK2-201ENST00000355560 KRT83P78385 493 aa28.09■■■□□ 2.09
CLK2-201ENST00000355560 CCNA1P78396 465 aa28.09■■■□□ 2.09
CLK2-201ENST00000355560 FBXO16Q8IX29 292 aaPredicted RBP28.09■■■□□ 2.09
CLK2-201ENST00000355560 C12orf56Q8IXR9 622 aa28.09■■■□□ 2.09
CLK2-201ENST00000355560 PCYT2Q99447 389 aa28.09■■■□□ 2.09
CLK2-201ENST00000355560 NUCKS1Q9H1E3 243 aaKnown RBP28.09■■■□□ 2.09
CLK2-201ENST00000355560 DDX41Q9UJV9 622 aaKnown RBP28.09■■■□□ 2.09
CLK2-201ENST00000355560 TBX20Q9UMR3 447 aa28.09■■■□□ 2.09
CLK2-201ENST00000355560 DENND3A2RUS2 1198 aa28.09■■■□□ 2.09
CLK2-201ENST00000355560 EIF3CLB5ME19 914 aaKnown RBP28.09■■■□□ 2.09
CLK2-201ENST00000355560 ABL1P00519 1130 aa28.09■■■□□ 2.09
CLK2-201ENST00000355560 ACTN1P12814 892 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms