RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 TRIM68Q6AZZ1 485 aa13.28□□□□□ -0.28
COLCA1-201ENST00000355430 SAMD7Q7Z3H4 446 aa13.28□□□□□ -0.28
COLCA1-201ENST00000355430 FBXL16Q8N461 479 aa13.28□□□□□ -0.28
COLCA1-201ENST00000355430 DEFB129Q9H1M3 183 aa13.28□□□□□ -0.28
COLCA1-201ENST00000355430 BHMT2Q9H2M3 363 aa13.28□□□□□ -0.28
COLCA1-201ENST00000355430 ANKZF1Q9H8Y5 726 aa13.28□□□□□ -0.28
COLCA1-201ENST00000355430 HESX1Q9UBX0 185 aa13.28□□□□□ -0.28
COLCA1-201ENST00000355430 MTMR2Q13614 643 aa13.28□□□□□ -0.28
COLCA1-201ENST00000355430 PPP1R12CQ9BZL4 782 aa13.28□□□□□ -0.28
COLCA1-201ENST00000355430 TYW1Q9NV66 732 aaKnown RBP13.28□□□□□ -0.28
COLCA1-201ENST00000355430 ALDH1A1P00352 501 aa13.28□□□□□ -0.28
COLCA1-201ENST00000355430 CCDC14Q49A88 953 aa13.28□□□□□ -0.28
COLCA1-201ENST00000355430 FHDC1Q9C0D6 1143 aaPredicted RBP13.28□□□□□ -0.28
COLCA1-201ENST00000355430 TAF1DQ9H5J8 278 aaPredicted RBP13.28□□□□□ -0.28
COLCA1-201ENST00000355430 SASH3O75995 380 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 HOXA13P31271 388 aaPredicted RBP13.27□□□□□ -0.28
COLCA1-201ENST00000355430 ELF1P32519 619 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 MAGOHP61326 146 aaKnown RBP13.27□□□□□ -0.28
COLCA1-201ENST00000355430 TKFCQ3LXA3 575 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 KAZNQ674X7 775 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 KCNV1Q6PIU1 500 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 MIS12Q9H081 205 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 KCND1Q9NSA2 647 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 RAB20Q9NX57 234 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 LRRIQ3A6PVS8 624 aaPredicted RBP13.27□□□□□ -0.28
COLCA1-201ENST00000355430 ZBTB5O15062 677 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 ECEL1O95672 775 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 EIF3BP55884 814 aaKnown RBP13.27□□□□□ -0.28
COLCA1-201ENST00000355430 SEMA3FQ13275 785 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 CCDC62Q6P9F0 684 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 C7orf25Q9BPX7 421 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 C1orf112Q9NSG2 853 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 GINM1Q9NU53 330 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 SNX24Q9Y343 169 aa13.27□□□□□ -0.28
COLCA1-201ENST00000355430 MFAP3P55082 362 aa13.27□□□□□ -0.29
COLCA1-201ENST00000355430 TBX2Q13207 712 aaPredicted RBP13.27□□□□□ -0.29
COLCA1-201ENST00000355430 MTERF2Q49AM1 385 aa13.27□□□□□ -0.29
COLCA1-201ENST00000355430 SGO2Q562F6 1265 aa13.27□□□□□ -0.29
COLCA1-201ENST00000355430 USP17L6PQ6QN14 398 aa13.27□□□□□ -0.29
COLCA1-201ENST00000355430 GCNAQ96QF7 691 aa13.27□□□□□ -0.29
COLCA1-201ENST00000355430 FAM49AQ9H0Q0 323 aaPredicted RBP13.27□□□□□ -0.29
COLCA1-201ENST00000355430 RBM12Q9NTZ6 932 aaKnown RBP13.27□□□□□ -0.29
COLCA1-201ENST00000355430 HNRNPDLO14979 420 aaKnown RBP13.27□□□□□ -0.29
COLCA1-201ENST00000355430 TRIP13Q15645 432 aaPredicted RBP13.27□□□□□ -0.29
COLCA1-201ENST00000355430 TRAPPC11Q7Z392 1133 aa13.27□□□□□ -0.29
COLCA1-201ENST00000355430 CCDC89Q8N998 374 aa13.27□□□□□ -0.29
COLCA1-201ENST00000355430 GDAP1Q8TB36 358 aa13.27□□□□□ -0.29
COLCA1-201ENST00000355430 SREK1Q8WXA9 508 aaKnown RBP13.27□□□□□ -0.29
COLCA1-201ENST00000355430 PPP2R3CQ969Q6 453 aa13.27□□□□□ -0.29
COLCA1-201ENST00000355430 VPS33BQ9H267 617 aa13.27□□□□□ -0.29
COLCA1-201ENST00000355430 ODF2LQ9ULJ1 636 aa13.27□□□□□ -0.29
COLCA1-201ENST00000355430 RASGRF2O14827 1237 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 WDR46O15213 610 aaKnown RBP13.26□□□□□ -0.29
COLCA1-201ENST00000355430 SKIV2LQ15477 1246 aaKnown RBP13.26□□□□□ -0.29
COLCA1-201ENST00000355430 C12orf60Q5U649 245 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 HIBCHQ6NVY1 386 aaPredicted RBP13.26□□□□□ -0.29
COLCA1-201ENST00000355430 PPP1R21Q6ZMI0 780 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 PARVGQ9HBI0 331 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 KMT5AQ9NQR1 393 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 DNAJC12Q9UKB3 198 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 NOC2LQ9Y3T9 749 aaKnown RBP13.26□□□□□ -0.29
COLCA1-201ENST00000355430 PPP2R3BQ9Y5P8 575 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 NWD1Q149M9 1564 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 NPHP3-ACAD11A0A0J9YXS1 232 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 NR3C1P04150 777 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 HDLBPQ00341 1268 aaKnown RBP13.26□□□□□ -0.29
COLCA1-201ENST00000355430 VPS52Q8N1B4 723 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 TAB3Q8N5C8 712 aaPredicted RBP13.26□□□□□ -0.29
COLCA1-201ENST00000355430 COL5A2P05997 1499 aaPredicted RBP13.26□□□□□ -0.29
COLCA1-201ENST00000355430 CCDC160A6NGH7 325 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 EIF3HO15372 352 aaKnown RBP eCLIP13.26□□□□□ -0.29
COLCA1-201ENST00000355430 STK10O94804 968 aaKnown RBP13.26□□□□□ -0.29
COLCA1-201ENST00000355430 CDKAL1Q5VV42 579 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 PHLDB2Q86SQ0 1253 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 POMGNT1Q8WZA1 660 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 ANKRD36BP1Q96IX9 119 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 TBK1Q9UHD2 729 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 POTEFA5A3E0 1075 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 GMNCA6NCL1 334 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 F5H6K3 240 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 POC1B-GALNT4F8VUJ3 575 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 HIP1RO75146 1068 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 MMEP08473 750 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 POTEIP0CG38 1075 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 KLRC3Q07444 240 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 NFX1Q12986 1120 aaKnown RBP13.26□□□□□ -0.29
COLCA1-201ENST00000355430 POTEGQ6S5H5 508 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 POTEEQ6S8J3 1075 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 SMC1BQ8NDV3 1235 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 PIGOQ8TEQ8 1089 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 RUBCNQ92622 972 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 P3H4Q92791 437 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 PLEKP08567 350 aaPredicted RBP13.26□□□□□ -0.29
COLCA1-201ENST00000355430 PPP2R2AP63151 447 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 ELAC2Q9BQ52 826 aaKnown RBP13.26□□□□□ -0.29
COLCA1-201ENST00000355430 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.26□□□□□ -0.29
COLCA1-201ENST00000355430 DNAJC17Q9NVM6 304 aaKnown RBP13.26□□□□□ -0.29
COLCA1-201ENST00000355430 EHD2Q9NZN4 543 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 L1RE1Q9UN81 338 aa13.26□□□□□ -0.29
COLCA1-201ENST00000355430 ATP8B3O60423 1300 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms