RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 BEST2Q8NFU1 509 aa14.15□□□□□ -0.14
SCN8A-202ENST00000355133 DHX38Q92620 1227 aaKnown RBP14.15□□□□□ -0.14
SCN8A-202ENST00000355133 C11orf70Q9BRQ4 267 aa14.15□□□□□ -0.14
SCN8A-202ENST00000355133 KRT82Q9NSB4 513 aa14.15□□□□□ -0.14
SCN8A-202ENST00000355133 LRRC53A6NM62 1247 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 TTLL4Q14679 1199 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 RASIP1Q5U651 963 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 CXorf38Q8TB03 319 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 WHAMMQ8TF30 809 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 KLHL29Q96CT2 875 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 ZNF521Q96K83 1311 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 M0QYV0 167 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 CHEK2O96017 543 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 PRCPP42785 496 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 GRM4Q14833 912 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 PSPC1Q8WXF1 523 aaKnown RBP14.14□□□□□ -0.15
SCN8A-202ENST00000355133 THOC1Q96FV9 657 aaKnown RBP14.14□□□□□ -0.15
SCN8A-202ENST00000355133 SPATA17Q96L03 361 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 POLR3FQ9H1D9 316 aaPredicted RBP14.14□□□□□ -0.15
SCN8A-202ENST00000355133 INTUQ9ULD6 942 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 SNX24Q9Y343 169 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 ADGRL3Q9HAR2 1447 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 UBE4BO95155 1302 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 MBD5Q9P267 1494 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 SRGAP2O75044 1071 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 PPARGP37231 505 aaPredicted RBP14.14□□□□□ -0.15
SCN8A-202ENST00000355133 GFPT1Q06210 699 aaPredicted RBP14.14□□□□□ -0.15
SCN8A-202ENST00000355133 NDUFAF2Q8N183 169 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 CNOT10Q9H9A5 744 aaKnown RBP14.14□□□□□ -0.15
SCN8A-202ENST00000355133 ABCB6Q9NP58 842 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 ASNSD1Q9NWL6 643 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 SAMD9LQ8IVG5 1584 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 PRR29P0C7W0 189 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 CYP19A1P11511 503 aaPredicted RBP14.14□□□□□ -0.15
SCN8A-202ENST00000355133 FSD1LQ9BXM9 530 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 GOLPH3LQ9H4A5 285 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 KIAA1586Q9HCI6 787 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 SUCLA2Q9P2R7 463 aaPredicted RBP14.14□□□□□ -0.15
SCN8A-202ENST00000355133 F5H6K3 240 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 TRPA1O75762 1119 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 RPSAP08865 295 aaKnown RBP14.14□□□□□ -0.15
SCN8A-202ENST00000355133 CDC27P30260 824 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 RECQLP46063 649 aaPredicted RBP14.14□□□□□ -0.15
SCN8A-202ENST00000355133 KLRC3Q07444 240 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 KCNH2Q12809 1159 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 TXNRD1Q16881 649 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 ELMOD1Q8N336 334 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 AFG1LQ8WV93 481 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 SAAL1Q96ER3 474 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 SPATA33Q96N06 139 aa14.14□□□□□ -0.15
SCN8A-202ENST00000355133 TSPOAP1O95153 1857 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 HSPA4LO95757 839 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 PAMP19021 973 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 GCKP35557 465 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 QRICH1Q2TAL8 776 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 ZBTB41Q5SVQ8 909 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 VPS39Q96JC1 886 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 PCSK1NQ9UHG2 260 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 ATP8B1O43520 1251 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 NR1D1P20393 614 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 FRA10AC1Q70Z53 315 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 IFT43Q96FT9 208 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 FAM20AQ96MK3 541 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 MID2Q9UJV3 735 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 PP2D1A8MPX8 630 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 ZBBXA8MT70 800 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 PPP1R12AO14974 1030 aaPredicted RBP14.13□□□□□ -0.15
SCN8A-202ENST00000355133 GPC5P78333 572 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 KIF19Q2TAC6 998 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 TAF1BQ53T94 588 aaPredicted RBP14.13□□□□□ -0.15
SCN8A-202ENST00000355133 CYFIP1Q7L576 1253 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 FBXL13Q8NEE6 735 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 TTC17Q96AE7 1141 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 P4HBP07237 508 aaKnown RBP14.13□□□□□ -0.15
SCN8A-202ENST00000355133 ADORA2BP29275 332 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 QARSP47897 775 aaKnown RBP14.13□□□□□ -0.15
SCN8A-202ENST00000355133 E2F5Q15329 346 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 RNF25Q96BH1 459 aaPredicted RBP14.13□□□□□ -0.15
SCN8A-202ENST00000355133 MMTAG2Q9BU76 263 aaKnown RBP14.13□□□□□ -0.15
SCN8A-202ENST00000355133 TSPYL2Q9H2G4 693 aaPredicted RBP14.13□□□□□ -0.15
SCN8A-202ENST00000355133 STK36Q9NRP7 1315 aa14.13□□□□□ -0.15
SCN8A-202ENST00000355133 ZRANB2O95218 330 aaKnown RBP eCLIP14.12□□□□□ -0.15
SCN8A-202ENST00000355133 VAMP7P51809 220 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 ATG16L1Q676U5 607 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 APOBEC3FQ8IUX4 373 aaKnown RBP14.12□□□□□ -0.15
SCN8A-202ENST00000355133 URGCPQ8TCY9 931 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 RBM41Q96IZ5 413 aaKnown RBP14.12□□□□□ -0.15
SCN8A-202ENST00000355133 EFHD1Q9BUP0 239 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 LGALS16A8MUM7 142 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 TAC1P20366 129 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 SSTR3P32745 418 aaPredicted RBP14.12□□□□□ -0.15
SCN8A-202ENST00000355133 C6orf118Q5T5N4 469 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 PPP1R18Q6NYC8 613 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 FAF1Q9UNN5 650 aaPredicted RBP14.12□□□□□ -0.15
SCN8A-202ENST00000355133 PTCH1Q13635 1447 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 F8W8V4 182 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 NT5C2P49902 561 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 ARL4CP56559 192 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 KNOP1Q1ED39 458 aaKnown RBP14.12□□□□□ -0.15
SCN8A-202ENST00000355133 LCA5Q86VQ0 697 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms