RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 PHF20Q9BVI0 1012 aa12.92□□□□□ -0.34
CDRT1-202ENST00000354433 GJB4Q9NTQ9 266 aa12.92□□□□□ -0.34
CDRT1-202ENST00000354433 RCOR1Q9UKL0 485 aa12.92□□□□□ -0.34
CDRT1-202ENST00000354433 NOC2LQ9Y3T9 749 aaKnown RBP12.92□□□□□ -0.34
CDRT1-202ENST00000354433 COL4A6Q14031 1691 aa12.92□□□□□ -0.34
CDRT1-202ENST00000354433 H3BNC9 293 aa12.91□□□□□ -0.34
CDRT1-202ENST00000354433 GPR182O15218 404 aa12.91□□□□□ -0.34
CDRT1-202ENST00000354433 SLC37A4O43826 429 aa12.91□□□□□ -0.34
CDRT1-202ENST00000354433 ZNF862O60290 1169 aa12.91□□□□□ -0.34
CDRT1-202ENST00000354433 CCNT1O60563 726 aaKnown RBP12.91□□□□□ -0.34
CDRT1-202ENST00000354433 PSMD10O75832 226 aa12.91□□□□□ -0.34
CDRT1-202ENST00000354433 DGKIO75912 1065 aa12.91□□□□□ -0.34
CDRT1-202ENST00000354433 LETM1O95202 739 aaPredicted RBP12.91□□□□□ -0.34
CDRT1-202ENST00000354433 U2AF2P26368 475 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDRT1-202ENST00000354433 FOSBP53539 338 aa12.91□□□□□ -0.34
CDRT1-202ENST00000354433 GUCY1B3Q02153 619 aa12.91□□□□□ -0.34
CDRT1-202ENST00000354433 TBC1D8BQ0IIM8 1120 aa12.91□□□□□ -0.34
CDRT1-202ENST00000354433 MTERF2Q49AM1 385 aa12.91□□□□□ -0.34
CDRT1-202ENST00000354433 EP400NLQ6ZTU2 488 aa12.91□□□□□ -0.34
CDRT1-202ENST00000354433 MRPL38Q96DV4 380 aaKnown RBP12.91□□□□□ -0.34
CDRT1-202ENST00000354433 C11orf84Q9BUA3 381 aaPredicted RBP12.91□□□□□ -0.34
CDRT1-202ENST00000354433 CDHR5Q9HBB8 845 aa12.91□□□□□ -0.34
CDRT1-202ENST00000354433 CYP3A7-CYP3A51PA0A087WV96 503 aa12.9□□□□□ -0.34
CDRT1-202ENST00000354433 TNFRSF10AO00220 468 aa12.9□□□□□ -0.34
CDRT1-202ENST00000354433 CYP3A7P24462 503 aa12.9□□□□□ -0.34
CDRT1-202ENST00000354433 KRT2P35908 639 aa12.9□□□□□ -0.34
CDRT1-202ENST00000354433 CRYBB1P53674 252 aaPredicted RBP12.9□□□□□ -0.34
CDRT1-202ENST00000354433 NLRP11P59045 1033 aaKnown RBP12.9□□□□□ -0.34
CDRT1-202ENST00000354433 SAFBQ15424 915 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDRT1-202ENST00000354433 BANK1Q8NDB2 785 aa12.9□□□□□ -0.34
CDRT1-202ENST00000354433 RDM1Q8NG50 284 aa12.9□□□□□ -0.34
CDRT1-202ENST00000354433 ETNPPLQ8TBG4 499 aa12.9□□□□□ -0.34
CDRT1-202ENST00000354433 ZNF668Q96K58 619 aaPredicted RBP12.9□□□□□ -0.34
CDRT1-202ENST00000354433 RC3H2Q9HBD1 1191 aaKnown RBP12.9□□□□□ -0.34
CDRT1-202ENST00000354433 ERVK-5Q9HDB9 667 aa12.9□□□□□ -0.34
CDRT1-202ENST00000354433 TMEM63CQ9P1W3 806 aa12.9□□□□□ -0.34
CDRT1-202ENST00000354433 TFIP11Q9UBB9 837 aaKnown RBP12.9□□□□□ -0.34
CDRT1-202ENST00000354433 ST3GAL5Q9UNP4 418 aa12.9□□□□□ -0.34
CDRT1-202ENST00000354433 TTC28Q96AY4 2481 aa12.9□□□□□ -0.34
CDRT1-202ENST00000354433 MMP1P03956 469 aa12.9□□□□□ -0.35
CDRT1-202ENST00000354433 GCFC2P16383 781 aaKnown RBP12.9□□□□□ -0.35
CDRT1-202ENST00000354433 SARSP49591 514 aaKnown RBP12.9□□□□□ -0.35
CDRT1-202ENST00000354433 SPOUT1Q5T280 376 aaKnown RBP12.9□□□□□ -0.35
CDRT1-202ENST00000354433 CCDC183Q5T5S1 534 aa12.9□□□□□ -0.35
CDRT1-202ENST00000354433 RTN4RL1Q86UN2 441 aaPredicted RBP12.9□□□□□ -0.35
CDRT1-202ENST00000354433 FAM228AQ86W67 206 aa12.9□□□□□ -0.35
CDRT1-202ENST00000354433 OXER1Q8TDS5 423 aa12.9□□□□□ -0.35
CDRT1-202ENST00000354433 ZNF689Q96CS4 500 aaPredicted RBP12.9□□□□□ -0.35
CDRT1-202ENST00000354433 NECAB3Q96P71 396 aaPredicted RBP12.9□□□□□ -0.35
CDRT1-202ENST00000354433 NAP1L4Q99733 375 aaKnown RBP12.9□□□□□ -0.35
CDRT1-202ENST00000354433 ADAM2Q99965 735 aa12.9□□□□□ -0.35
CDRT1-202ENST00000354433 SH2D3AQ9BRG2 576 aa12.9□□□□□ -0.35
CDRT1-202ENST00000354433 FOXP1Q9H334 677 aaPredicted RBP12.9□□□□□ -0.35
CDRT1-202ENST00000354433 TMX1Q9H3N1 280 aa12.9□□□□□ -0.35
CDRT1-202ENST00000354433 C1orf112Q9NSG2 853 aa12.9□□□□□ -0.35
CDRT1-202ENST00000354433 PCDHB7Q9Y5E2 793 aa12.9□□□□□ -0.35
CDRT1-202ENST00000354433 TMEM150BA6NC51 233 aa12.89□□□□□ -0.35
CDRT1-202ENST00000354433 GOLGA6L4A6NEF3 574 aa12.89□□□□□ -0.35
CDRT1-202ENST00000354433 YEATS4O95619 227 aa12.89□□□□□ -0.35
CDRT1-202ENST00000354433 RB1P06400 928 aa12.89□□□□□ -0.35
CDRT1-202ENST00000354433 KCNA5P22460 613 aa12.89□□□□□ -0.35
CDRT1-202ENST00000354433 BMPR1AP36894 532 aa12.89□□□□□ -0.35
CDRT1-202ENST00000354433 NASPP49321 788 aaPredicted RBP12.89□□□□□ -0.35
CDRT1-202ENST00000354433 MRE11P49959 708 aa12.89□□□□□ -0.35
CDRT1-202ENST00000354433 GATMP50440 423 aa12.89□□□□□ -0.35
CDRT1-202ENST00000354433 XKR3Q5GH77 459 aa12.89□□□□□ -0.35
CDRT1-202ENST00000354433 CMTR2Q8IYT2 770 aaKnown RBP12.89□□□□□ -0.35
CDRT1-202ENST00000354433 NLRP7Q8WX94 980 aa12.89□□□□□ -0.35
CDRT1-202ENST00000354433 MBOAT7Q96N66 472 aa12.89□□□□□ -0.35
CDRT1-202ENST00000354433 USP28Q96RU2 1077 aa12.89□□□□□ -0.35
CDRT1-202ENST00000354433 NSUN3Q9H649 340 aaKnown RBP12.89□□□□□ -0.35
CDRT1-202ENST00000354433 UBE2ZQ9H832 354 aaPredicted RBP12.89□□□□□ -0.35
CDRT1-202ENST00000354433 RNF216Q9NWF9 866 aaPredicted RBP12.89□□□□□ -0.35
CDRT1-202ENST00000354433 MRPL42Q9Y6G3 142 aaKnown RBP12.89□□□□□ -0.35
CDRT1-202ENST00000354433 TRANK1O15050 2925 aa12.88□□□□□ -0.35
CDRT1-202ENST00000354433 MGEA5O60502 916 aa12.88□□□□□ -0.35
CDRT1-202ENST00000354433 GPR32O75388 356 aa12.88□□□□□ -0.35
CDRT1-202ENST00000354433 ZSCAN20P17040 1043 aaPredicted RBP12.88□□□□□ -0.35
CDRT1-202ENST00000354433 PSMC5P62195 406 aa12.88□□□□□ -0.35
CDRT1-202ENST00000354433 NR5A1Q13285 461 aa12.88□□□□□ -0.35
CDRT1-202ENST00000354433 PPP4R3AQ6IN85 833 aa12.88□□□□□ -0.35
CDRT1-202ENST00000354433 SLC24A5Q71RS6 500 aa12.88□□□□□ -0.35
CDRT1-202ENST00000354433 KCNG4Q8TDN1 519 aa12.88□□□□□ -0.35
CDRT1-202ENST00000354433 CLP1Q92989 425 aaKnown RBP12.88□□□□□ -0.35
CDRT1-202ENST00000354433 TBKBP1A7MCY6 615 aa12.87□□□□□ -0.35
CDRT1-202ENST00000354433 C5orf67F2Z3F1 127 aa12.87□□□□□ -0.35
CDRT1-202ENST00000354433 GRM6O15303 877 aa12.87□□□□□ -0.35
CDRT1-202ENST00000354433 DKC1O60832 514 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDRT1-202ENST00000354433 BMP1P13497 986 aa12.87□□□□□ -0.35
CDRT1-202ENST00000354433 DNM2P50570 870 aa12.87□□□□□ -0.35
CDRT1-202ENST00000354433 GPC3P51654 580 aa12.87□□□□□ -0.35
CDRT1-202ENST00000354433 GNL2Q13823 731 aaKnown RBP12.87□□□□□ -0.35
CDRT1-202ENST00000354433 TCEAL5Q5H9L2 206 aa12.87□□□□□ -0.35
CDRT1-202ENST00000354433 NCAPH2Q6IBW4 605 aa12.87□□□□□ -0.35
CDRT1-202ENST00000354433 LRSAM1Q6UWE0 723 aa12.87□□□□□ -0.35
CDRT1-202ENST00000354433 LINC01465Q8N7H1 131 aa12.87□□□□□ -0.35
CDRT1-202ENST00000354433 FAM20AQ96MK3 541 aa12.87□□□□□ -0.35
CDRT1-202ENST00000354433 ATP6V0A4Q9HBG4 840 aa12.87□□□□□ -0.35
CDRT1-202ENST00000354433 ALG13Q9NP73 1137 aaKnown RBP12.87□□□□□ -0.35
CDRT1-202ENST00000354433 KCNMB3Q9NPA1 279 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms