RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 LINC01465Q8N7H1 131 aa17.88■□□□□ 0.45
COPE-202ENST00000349893 C12orf76Q8N812 135 aaPredicted RBP17.88■□□□□ 0.45
COPE-202ENST00000349893 FLCNQ8NFG4 579 aa17.88■□□□□ 0.45
COPE-202ENST00000349893 BBXQ8WY36 941 aaPredicted RBP17.88■□□□□ 0.45
COPE-202ENST00000349893 RSPH1Q8WYR4 309 aa17.88■□□□□ 0.45
COPE-202ENST00000349893 RMDN1Q96DB5 314 aa17.88■□□□□ 0.45
COPE-202ENST00000349893 MRPL9Q9BYD2 267 aaKnown RBP17.88■□□□□ 0.45
COPE-202ENST00000349893 MAFBQ9Y5Q3 323 aaPredicted RBP17.88■□□□□ 0.45
COPE-202ENST00000349893 CACNA1BQ00975 2339 aa17.88■□□□□ 0.45
COPE-202ENST00000349893 SH2B2O14492 632 aaPredicted RBP17.87■□□□□ 0.45
COPE-202ENST00000349893 CXCL14O95715 111 aa17.87■□□□□ 0.45
COPE-202ENST00000349893 IGHDP01880 384 aa17.87■□□□□ 0.45
COPE-202ENST00000349893 CALM1P0DP23 149 aa17.87■□□□□ 0.45
COPE-202ENST00000349893 CALM2P0DP24 149 aa17.87■□□□□ 0.45
COPE-202ENST00000349893 CALM3P0DP25 149 aa17.87■□□□□ 0.45
COPE-202ENST00000349893 EPCAMP16422 314 aa17.87■□□□□ 0.45
COPE-202ENST00000349893 EIF4BP23588 611 aaKnown RBP17.87■□□□□ 0.45
COPE-202ENST00000349893 SREBF1P36956 1147 aa17.87■□□□□ 0.45
COPE-202ENST00000349893 BMS1Q14692 1282 aaKnown RBP17.87■□□□□ 0.45
COPE-202ENST00000349893 TMTC3Q6ZXV5 915 aa17.87■□□□□ 0.45
COPE-202ENST00000349893 PPP1R16BQ96T49 567 aa17.87■□□□□ 0.45
COPE-202ENST00000349893 RIC8AQ9NPQ8 531 aa17.87■□□□□ 0.45
COPE-202ENST00000349893 MYH9P35579 1960 aaKnown RBP17.86■□□□□ 0.45
COPE-202ENST00000349893 hCG_1642624A0A1W2PR95 340 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 MED19A0JLT2 244 aaPredicted RBP17.86■□□□□ 0.45
COPE-202ENST00000349893 CARNS1A5YM72 827 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 CTSAP10619 480 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 GSPT1P15170 499 aaKnown RBP17.86■□□□□ 0.45
COPE-202ENST00000349893 ZSCAN20P17040 1043 aaPredicted RBP17.86■□□□□ 0.45
COPE-202ENST00000349893 LIFRP42702 1097 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 ALDH7A1P49419 539 aaKnown RBP17.86■□□□□ 0.45
COPE-202ENST00000349893 BCAR1P56945 870 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 TYW1BQ6NUM6 668 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 SWSAP1Q6NVH7 229 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 KANK3Q6NY19 840 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 PPP1R18Q6NYC8 613 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 MIS18BP1Q6P0N0 1132 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 OTOP3Q7RTS5 596 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 HEATR3Q7Z4Q2 680 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 GPR149Q86SP6 731 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 VPS52Q8N1B4 723 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 RUFY2Q8WXA3 655 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 MAP4K1Q92918 833 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 ACSF2Q96CM8 615 aaPredicted RBP17.86■□□□□ 0.45
COPE-202ENST00000349893 TMEM87BQ96K49 555 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 ANO3Q9BYT9 981 aa17.86■□□□□ 0.45
COPE-202ENST00000349893 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.85■□□□□ 0.45
COPE-202ENST00000349893 MAGEB2O15479 319 aa17.85■□□□□ 0.45
COPE-202ENST00000349893 PRC1O43663 620 aa17.85■□□□□ 0.45
COPE-202ENST00000349893 LMNAP02545 664 aaKnown RBP17.85■□□□□ 0.45
COPE-202ENST00000349893 CHMLP26374 656 aa17.85■□□□□ 0.45
COPE-202ENST00000349893 METAP2P50579 478 aaKnown RBP eCLIP17.85■□□□□ 0.454e-7■■■□□ 15.1
COPE-202ENST00000349893 NLRP11P59045 1033 aaKnown RBP17.85■□□□□ 0.45
COPE-202ENST00000349893 WWC2Q6AWC2 1192 aa17.85■□□□□ 0.45
COPE-202ENST00000349893 CASC1Q6TDU7 716 aa17.85■□□□□ 0.45
COPE-202ENST00000349893 DDX53Q86TM3 631 aaKnown RBP17.85■□□□□ 0.45
COPE-202ENST00000349893 TMEM173Q86WV6 379 aaPredicted RBP17.85■□□□□ 0.45
COPE-202ENST00000349893 METTL13Q8N6R0 699 aa17.85■□□□□ 0.45
COPE-202ENST00000349893 FEZF2Q8TBJ5 459 aa17.85■□□□□ 0.45
COPE-202ENST00000349893 HELQQ8TDG4 1101 aa17.85■□□□□ 0.45
COPE-202ENST00000349893 CRYGNQ8WXF5 182 aa17.85■□□□□ 0.45
COPE-202ENST00000349893 TMEM169Q96HH4 297 aa17.85■□□□□ 0.45
COPE-202ENST00000349893 TRAIPQ9BWF2 469 aa17.85■□□□□ 0.45
COPE-202ENST00000349893 SFXN1Q9H9B4 322 aa17.85■□□□□ 0.45
COPE-202ENST00000349893 KCNK12Q9HB15 430 aa17.85■□□□□ 0.45
COPE-202ENST00000349893 CEP131Q9UPN4 1083 aa17.85■□□□□ 0.45
COPE-202ENST00000349893 FANCMQ8IYD8 2048 aa17.84■□□□□ 0.45
COPE-202ENST00000349893 C2orf16Q68DN1 1984 aa17.84■□□□□ 0.45
COPE-202ENST00000349893 CCDC69A6NI79 296 aa17.84■□□□□ 0.45
COPE-202ENST00000349893 RXRAP19793 462 aa17.84■□□□□ 0.45
COPE-202ENST00000349893 CLK2P49760 499 aaKnown RBP17.84■□□□□ 0.45
COPE-202ENST00000349893 CLCN3P51790 818 aa17.84■□□□□ 0.45
COPE-202ENST00000349893 AP3B2Q13367 1082 aa17.84■□□□□ 0.45
COPE-202ENST00000349893 TTC22Q5TAA0 569 aa17.84■□□□□ 0.45
COPE-202ENST00000349893 TMC5Q6UXY8 1006 aa17.84■□□□□ 0.45
COPE-202ENST00000349893 CCDC149Q6ZUS6 474 aa17.84■□□□□ 0.45
COPE-202ENST00000349893 PPFIBP1Q86W92 1011 aa17.84■□□□□ 0.45
COPE-202ENST00000349893 SIX5Q8N196 739 aa17.84■□□□□ 0.45
COPE-202ENST00000349893 FANCBQ8NB91 859 aa17.84■□□□□ 0.45
COPE-202ENST00000349893 PGBD1Q96JS3 809 aa17.84■□□□□ 0.45
COPE-202ENST00000349893 WDR81Q562E7 1941 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 IGLV3-22A0A075B6J6 115 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 NT5C1B-RDH14C9J2C7 533 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 FAM86B1E9PN63 330 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 DDX39AO00148 427 aaKnown RBP17.83■□□□□ 0.44
COPE-202ENST00000349893 IPO5O00410 1097 aaKnown RBP17.83■□□□□ 0.44
COPE-202ENST00000349893 SGSM2O43147 1006 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 FAM86B2P0C5J1 330 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 DARSP14868 501 aaKnown RBP17.83■□□□□ 0.44
COPE-202ENST00000349893 MCM5P33992 734 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 ZNF746Q6NUN9 644 aaPredicted RBP17.83■□□□□ 0.44
COPE-202ENST00000349893 NFXL1Q6ZNB6 911 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 C15orf39Q6ZRI6 1047 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 DGLUCYQ7Z3D6 616 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 CABP7Q86V35 215 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 CCDC82Q8N4S0 544 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 AUTS2Q8WXX7 1259 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 IGSF21Q96ID5 467 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 MAP7D2Q96T17 732 aa17.83■□□□□ 0.44
COPE-202ENST00000349893 DACT1Q9NYF0 836 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms