RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 HNRNPH3P31942 346 aaKnown RBP23.26■■□□□ 1.31
PTPN18-202ENST00000347849 MTMR1Q13613 665 aa23.26■■□□□ 1.31
PTPN18-202ENST00000347849 TRMT1LQ7Z2T5 733 aaKnown RBP23.26■■□□□ 1.31
PTPN18-202ENST00000347849 ZNF572Q7Z3I7 529 aaPredicted RBP23.26■■□□□ 1.31
PTPN18-202ENST00000347849 MYCT1Q8N699 235 aa23.26■■□□□ 1.31
PTPN18-202ENST00000347849 ALS2CR12Q96Q35 445 aa23.26■■□□□ 1.31
PTPN18-202ENST00000347849 FIZ1Q96SL8 496 aa23.26■■□□□ 1.31
PTPN18-202ENST00000347849 AS3MTQ9HBK9 375 aa23.26■■□□□ 1.31
PTPN18-202ENST00000347849 STIM2Q9P246 746 aa23.26■■□□□ 1.31
PTPN18-202ENST00000347849 HYOU1Q9Y4L1 999 aa23.26■■□□□ 1.31
PTPN18-202ENST00000347849 TMEM150BA6NC51 233 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 TCP1P17987 556 aaKnown RBP23.25■■□□□ 1.31
PTPN18-202ENST00000347849 EPHB4P54760 987 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 RRAGAQ7L523 313 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 NACC1Q96RE7 527 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 RUFY1Q96T51 708 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 PDCD2LQ9BRP1 358 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 SALL4Q9UJQ4 1053 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 ZNF214Q9UL59 606 aaPredicted RBP23.25■■□□□ 1.31
PTPN18-202ENST00000347849 TRAF3IP3Q9Y228 551 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 ASTN1O14525 1302 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 GRIN2DO15399 1336 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 CLIC2O15247 247 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 CPP00450 1065 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 PAFAH1B1P43034 410 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 MAGEA1P43355 309 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 TMEM132BQ14DG7 1078 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 SNRNP48Q6IEG0 339 aaKnown RBP23.25■■□□□ 1.31
PTPN18-202ENST00000347849 GBP6Q6ZN66 633 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 MAEAQ7L5Y9 396 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 MIER3Q7Z3K6 550 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 CNKSR2Q8WXI2 1034 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 PXMP2Q9NR77 195 aa23.25■■□□□ 1.31
PTPN18-202ENST00000347849 FRMPD4Q14CM0 1322 aa23.24■■□□□ 1.31
PTPN18-202ENST00000347849 CASP4P49662 377 aa23.24■■□□□ 1.31
PTPN18-202ENST00000347849 EDRF1Q3B7T1 1238 aa23.24■■□□□ 1.31
PTPN18-202ENST00000347849 TTMPQ5BVD1 217 aa23.24■■□□□ 1.31
PTPN18-202ENST00000347849 FHDC1Q9C0D6 1143 aaPredicted RBP23.24■■□□□ 1.31
PTPN18-202ENST00000347849 SAMM50Q9Y512 469 aa23.24■■□□□ 1.31
PTPN18-202ENST00000347849 LRRC53A6NM62 1247 aa23.24■■□□□ 1.31
PTPN18-202ENST00000347849 TGFB1I1O43294 461 aa23.24■■□□□ 1.31
PTPN18-202ENST00000347849 HSF2BPO75031 334 aa23.24■■□□□ 1.31
PTPN18-202ENST00000347849 NOL4O94818 638 aa23.24■■□□□ 1.31
PTPN18-202ENST00000347849 ERLIN2O94905 339 aa23.24■■□□□ 1.31
PTPN18-202ENST00000347849 FAM13AO94988 1023 aa23.24■■□□□ 1.31
PTPN18-202ENST00000347849 DSG3P32926 999 aa23.24■■□□□ 1.31
PTPN18-202ENST00000347849 MARSP56192 900 aaKnown RBP23.24■■□□□ 1.31
PTPN18-202ENST00000347849 BAP1Q92560 729 aa23.24■■□□□ 1.31
PTPN18-202ENST00000347849 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.24■■□□□ 1.31
PTPN18-202ENST00000347849 RLFQ13129 1914 aa23.24■■□□□ 1.31
PTPN18-202ENST00000347849 BUB1O43683 1085 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 USP2O75604 605 aaPredicted RBP23.23■■□□□ 1.31
PTPN18-202ENST00000347849 AKAP3O75969 853 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 NAP1L1P55209 391 aaKnown RBP23.23■■□□□ 1.31
PTPN18-202ENST00000347849 DAW1Q8N136 415 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 MS4A14Q96JA4 679 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 OLFML3Q9NRN5 406 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 RBM12Q9NTZ6 932 aaKnown RBP23.23■■□□□ 1.31
PTPN18-202ENST00000347849 POLR2AP24928 1970 aaKnown RBP23.23■■□□□ 1.31
PTPN18-202ENST00000347849 ZMYM2Q9UBW7 1377 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 CETN3O15182 167 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 COG2Q14746 738 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 UGCGQ16739 394 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 BMT2Q1RMZ1 405 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 ALS2CLQ60I27 953 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 KCTD16Q68DU8 428 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 C8orf74Q6P047 294 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 EMBQ6PCB8 327 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 C12orf42Q96LP6 360 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 TELO2Q9Y4R8 837 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 PARP14Q460N5 1801 aa23.23■■□□□ 1.31
PTPN18-202ENST00000347849 TESPA1A2RU30 521 aaPredicted RBP23.22■■□□□ 1.31
PTPN18-202ENST00000347849 GFPT1Q06210 699 aaPredicted RBP23.22■■□□□ 1.31
PTPN18-202ENST00000347849 ARHGEF16Q5VV41 709 aa23.22■■□□□ 1.31
PTPN18-202ENST00000347849 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.22■■□□□ 1.31
PTPN18-202ENST00000347849 RUBCNQ92622 972 aa23.22■■□□□ 1.31
PTPN18-202ENST00000347849 PARVGQ9HBI0 331 aa23.22■■□□□ 1.31
PTPN18-202ENST00000347849 NLRC4Q9NPP4 1024 aa23.22■■□□□ 1.31
PTPN18-202ENST00000347849 ADAMTS5Q9UNA0 930 aa23.22■■□□□ 1.31
PTPN18-202ENST00000347849 AFG3L2Q9Y4W6 797 aa23.22■■□□□ 1.31
PTPN18-202ENST00000347849 LCA5LO95447 670 aa23.22■■□□□ 1.31
PTPN18-202ENST00000347849 CCNE2O96020 404 aa23.22■■□□□ 1.31
PTPN18-202ENST00000347849 MAPK7Q13164 816 aa23.22■■□□□ 1.31
PTPN18-202ENST00000347849 NIPA1Q7RTP0 329 aa23.22■■□□□ 1.31
PTPN18-202ENST00000347849 ZIM3Q96PE6 472 aa23.22■■□□□ 1.31
PTPN18-202ENST00000347849 TLR10Q9BXR5 811 aa23.22■■□□□ 1.31
PTPN18-202ENST00000347849 ADM5C9JUS6 153 aa23.21■■□□□ 1.31
PTPN18-202ENST00000347849 PDXKO00764 312 aa23.21■■□□□ 1.31
PTPN18-202ENST00000347849 PPP4R3CPQ6ZMV5 832 aa23.21■■□□□ 1.31
PTPN18-202ENST00000347849 CATSPERGQ6ZRH7 1159 aa23.21■■□□□ 1.31
PTPN18-202ENST00000347849 SH2D3CQ8N5H7 860 aa23.21■■□□□ 1.31
PTPN18-202ENST00000347849 KCTD17Q8N5Z5 321 aa23.21■■□□□ 1.31
PTPN18-202ENST00000347849 IQCDQ96DY2 449 aa23.21■■□□□ 1.31
PTPN18-202ENST00000347849 PHIPQ8WWQ0 1821 aa23.21■■□□□ 1.31
PTPN18-202ENST00000347849 KRT14P02533 472 aa23.21■■□□□ 1.31
PTPN18-202ENST00000347849 NR3C1P04150 777 aa23.21■■□□□ 1.31
PTPN18-202ENST00000347849 EPB41P11171 864 aaKnown RBP23.21■■□□□ 1.31
PTPN18-202ENST00000347849 ATP1A2P50993 1020 aa23.21■■□□□ 1.31
PTPN18-202ENST00000347849 KCNH2Q12809 1159 aa23.21■■□□□ 1.31
PTPN18-202ENST00000347849 PDCLQ13371 301 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms