RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TOB1P50616 345 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-202ENST00000346436 EXOC3L4Q17RC7 722 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 DGKHQ86XP1 1220 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 COX16Q9P0S2 106 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 NFU1Q9UMS0 254 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 PACSIN2Q9UNF0 486 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-202ENST00000346436 LRRC53A6NM62 1247 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 TXNP10599 105 aaKnown RBP11.72□□□□□ -0.53
CLCN6-202ENST00000346436 MAPK4P31152 587 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 ARL4AP40617 200 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 ST8SIA6P61647 398 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 DPYDQ12882 1025 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 TRIM28Q13263 835 aaKnown RBP11.72□□□□□ -0.53
CLCN6-202ENST00000346436 NCAPHQ15003 741 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 UAP1Q16222 522 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-202ENST00000346436 PHF20Q9BVI0 1012 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 KDM6AO15550 1401 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-202ENST00000346436 PFASO15067 1338 aa11.71□□□□□ -0.53
CLCN6-202ENST00000346436 SFI1A8K8P3 1242 aa11.71□□□□□ -0.53
CLCN6-202ENST00000346436 ASIC3Q9UHC3 531 aa11.71□□□□□ -0.53
CLCN6-202ENST00000346436 SKIP12755 728 aa11.71□□□□□ -0.53
CLCN6-202ENST00000346436 CA4P22748 312 aa11.71□□□□□ -0.53
CLCN6-202ENST00000346436 TPD52P55327 224 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-202ENST00000346436 MMTAG2Q9BU76 263 aaKnown RBP11.71□□□□□ -0.53
CLCN6-202ENST00000346436 AGPAT5Q9NUQ2 364 aa11.71□□□□□ -0.53
CLCN6-202ENST00000346436 SMARCAL1Q9NZC9 954 aa11.71□□□□□ -0.53
CLCN6-202ENST00000346436 JRKLQ9Y4A0 524 aa11.71□□□□□ -0.53
CLCN6-202ENST00000346436 PCDHB4Q9Y5E5 795 aa11.71□□□□□ -0.53
CLCN6-202ENST00000346436 INHBEP58166 350 aa11.71□□□□□ -0.53
CLCN6-202ENST00000346436 PPP2R5CQ13362 524 aa11.71□□□□□ -0.53
CLCN6-202ENST00000346436 LRRC31Q6UY01 552 aa11.71□□□□□ -0.53
CLCN6-202ENST00000346436 SCN4BQ8IWT1 228 aa11.71□□□□□ -0.53
CLCN6-202ENST00000346436 PPM1KQ8N3J5 372 aa11.71□□□□□ -0.53
CLCN6-202ENST00000346436 RAB3IPQ96QF0 476 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-202ENST00000346436 FAM196BA6NMK8 535 aa11.71□□□□□ -0.54
CLCN6-202ENST00000346436 DYNC1LI2O43237 492 aaPredicted RBP11.71□□□□□ -0.54
CLCN6-202ENST00000346436 GYPCP04921 128 aa11.71□□□□□ -0.54
CLCN6-202ENST00000346436 REM2Q8IYK8 340 aaPredicted RBP11.71□□□□□ -0.54
CLCN6-202ENST00000346436 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.71□□□□□ -0.54
CLCN6-202ENST00000346436 TBC1D16Q8TBP0 767 aa11.71□□□□□ -0.54
CLCN6-202ENST00000346436 RIN2Q8WYP3 895 aaPredicted RBP11.71□□□□□ -0.54
CLCN6-202ENST00000346436 PPP1R16BQ96T49 567 aa11.71□□□□□ -0.54
CLCN6-202ENST00000346436 IFT172Q9UG01 1749 aa11.71□□□□□ -0.54
CLCN6-202ENST00000346436 LRRN2O75325 713 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 ERO1BQ86YB8 467 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 PLA2G12BQ9BX93 195 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 MSRAQ9UJ68 235 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 DOLKQ9UPQ8 538 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-202ENST00000346436 CARNS1A5YM72 827 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 FKBP3Q00688 224 aaKnown RBP11.7□□□□□ -0.54
CLCN6-202ENST00000346436 PPP1R18Q6NYC8 613 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 CROCCP2Q86T23 111 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 CCDC170Q8IYT3 715 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 ANKRD42Q8N9B4 389 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 FAM151AQ8WW52 585 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 MSTO1Q9BUK6 570 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 KIAA1586Q9HCI6 787 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 AGLP35573 1532 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 H2AFZP0C0S5 128 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 CASP7P55210 303 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 DEFB115Q30KQ5 88 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 ANKRD40Q6AI12 368 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 H2AFVQ71UI9 128 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 ZNF560Q96MR9 790 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 ZNF70Q9UC06 446 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-202ENST00000346436 MYO1CO00159 1063 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 BNIP3LO60238 219 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 GFPT2O94808 682 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 EPHB4P54760 987 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 NNTQ13423 1086 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 SEPT2Q15019 361 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 TRIM56Q9BRZ2 755 aaKnown RBP11.7□□□□□ -0.54
CLCN6-202ENST00000346436 STK17AQ9UEE5 414 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 PTPN22Q9Y2R2 807 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 PSMD14O00487 310 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 BUB1BO60566 1050 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-202ENST00000346436 RALAP11233 206 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 CALRP27797 417 aaKnown RBP11.7□□□□□ -0.54
CLCN6-202ENST00000346436 GLB1LQ6UWU2 654 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 EMILIN3Q9NT22 766 aa11.7□□□□□ -0.54
CLCN6-202ENST00000346436 PNPLA7Q6ZV29 1317 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 E9PMD0 336 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 HOXA13P31271 388 aaPredicted RBP11.69□□□□□ -0.54
CLCN6-202ENST00000346436 NR1H3Q13133 447 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 SLC10A5Q5PT55 438 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 NOA1Q8NC60 698 aaKnown RBP11.69□□□□□ -0.54
CLCN6-202ENST00000346436 OR6B3Q8NGW1 331 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 EDEM3Q9BZQ6 932 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 SEPT10Q9P0V9 454 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 PCDHA6Q9UN73 950 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 PCDHA8Q9Y5H6 950 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 TACC3Q9Y6A5 838 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 PALMO75781 387 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 TDP2O95551 362 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 MTMR2Q13614 643 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 GNASQ5JWF2 1037 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 BSPRYQ5W0U4 402 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 CLEC10AQ8IUN9 316 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms