RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 PAK2Q13177 524 aa18■□□□□ 0.47
RAB5C-201ENST00000346213 CCDC85BQ15834 202 aaPredicted RBP18■□□□□ 0.47
RAB5C-201ENST00000346213 IL17AQ16552 155 aa18■□□□□ 0.47
RAB5C-201ENST00000346213 FOXD4L5Q5VV16 416 aaPredicted RBP18■□□□□ 0.47
RAB5C-201ENST00000346213 FOXD4L4Q8WXT5 416 aaPredicted RBP18■□□□□ 0.47
RAB5C-201ENST00000346213 XPNPEP1Q9NQW7 623 aa18■□□□□ 0.47
RAB5C-201ENST00000346213 CYP26B1Q9NR63 512 aa18■□□□□ 0.47
RAB5C-201ENST00000346213 NRBP2Q9NSY0 501 aa18■□□□□ 0.47
RAB5C-201ENST00000346213 PCDHB6Q9Y5E3 794 aa18■□□□□ 0.47
RAB5C-201ENST00000346213 ARID2Q68CP9 1835 aa18■□□□□ 0.47
RAB5C-201ENST00000346213 MAFO75444 373 aaPredicted RBP17.99■□□□□ 0.47
RAB5C-201ENST00000346213 P4HBP07237 508 aaKnown RBP17.99■□□□□ 0.47
RAB5C-201ENST00000346213 IGFBP4P22692 258 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 CRYBB1P53674 252 aaPredicted RBP17.99■□□□□ 0.47
RAB5C-201ENST00000346213 TBC1D8BQ0IIM8 1120 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 NFX1Q12986 1120 aaKnown RBP17.99■□□□□ 0.47
RAB5C-201ENST00000346213 ECM1Q16610 540 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 FAM184AQ8NB25 1140 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 LMBRD1Q9NUN5 540 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 RNF19AQ9NV58 838 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 CEP131Q9UPN4 1083 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 MTMR6Q9Y217 621 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 MYH15Q9Y2K3 1946 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 MAGEB2O15479 319 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 MED24O75448 989 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 RPS6KA5O75582 802 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 DEKP35659 375 aaKnown RBP17.99■□□□□ 0.47
RAB5C-201ENST00000346213 TTC3P53804 2025 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 TTC38Q5R3I4 469 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 C4orf19Q8IY42 314 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 SLFN12Q8IYM2 578 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 NAP1L4Q99733 375 aaKnown RBP17.99■□□□□ 0.47
RAB5C-201ENST00000346213 INSL6Q9Y581 213 aa17.99■□□□□ 0.47
RAB5C-201ENST00000346213 M0QZ92 97 aa17.98■□□□□ 0.47
RAB5C-201ENST00000346213 DGKIO75912 1065 aa17.98■□□□□ 0.47
RAB5C-201ENST00000346213 F13A1P00488 732 aa17.98■□□□□ 0.47
RAB5C-201ENST00000346213 IBSPP21815 317 aaPredicted RBP17.98■□□□□ 0.47
RAB5C-201ENST00000346213 YWHABP31946 246 aaKnown RBP17.98■□□□□ 0.47
RAB5C-201ENST00000346213 LARP1BQ659C4 914 aaKnown RBP17.98■□□□□ 0.47
RAB5C-201ENST00000346213 TMEM143Q96AN5 459 aa17.98■□□□□ 0.47
RAB5C-201ENST00000346213 YME1L1Q96TA2 773 aa17.98■□□□□ 0.47
RAB5C-201ENST00000346213 DHX33Q9H6R0 707 aaKnown RBP17.98■□□□□ 0.47
RAB5C-201ENST00000346213 PCDHA12Q9UN75 941 aa17.98■□□□□ 0.47
RAB5C-201ENST00000346213 A0A087WZ62 844 aa17.97■□□□□ 0.47
RAB5C-201ENST00000346213 C9IYK1 514 aa17.97■□□□□ 0.47
RAB5C-201ENST00000346213 DARSP14868 501 aaKnown RBP17.97■□□□□ 0.47
RAB5C-201ENST00000346213 TPH2Q8IWU9 490 aa17.97■□□□□ 0.47
RAB5C-201ENST00000346213 SLC17A8Q8NDX2 589 aa17.97■□□□□ 0.47
RAB5C-201ENST00000346213 PIGOQ8TEQ8 1089 aa17.97■□□□□ 0.47
RAB5C-201ENST00000346213 TGS1Q96RS0 853 aaKnown RBP17.97■□□□□ 0.47
RAB5C-201ENST00000346213 GAS2L1Q99501 681 aaPredicted RBP17.97■□□□□ 0.47
RAB5C-201ENST00000346213 ADAM2Q99965 735 aa17.97■□□□□ 0.47
RAB5C-201ENST00000346213 FDXACB1Q9BRP7 624 aaPredicted RBP17.97■□□□□ 0.47
RAB5C-201ENST00000346213 MINDY3Q9H8M7 445 aa17.97■□□□□ 0.47
RAB5C-201ENST00000346213 ATP6V1DQ9Y5K8 247 aa17.97■□□□□ 0.47
RAB5C-201ENST00000346213 PRRC2BQ5JSZ5 2229 aaKnown RBP17.97■□□□□ 0.47
RAB5C-201ENST00000346213 ATG2AQ2TAZ0 1938 aa17.97■□□□□ 0.47
RAB5C-201ENST00000346213 ADGRA3Q8IWK6 1321 aa17.97■□□□□ 0.47
RAB5C-201ENST00000346213 SAFBQ15424 915 aaKnown RBP eCLIP17.96■□□□□ 0.47
RAB5C-201ENST00000346213 EPC2Q52LR7 807 aa17.96■□□□□ 0.47
RAB5C-201ENST00000346213 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.96■□□□□ 0.47
RAB5C-201ENST00000346213 MICALL1Q8N3F8 863 aa17.96■□□□□ 0.47
RAB5C-201ENST00000346213 CEP170P1Q96L14 293 aa17.96■□□□□ 0.47
RAB5C-201ENST00000346213 MRPL42Q9Y6G3 142 aaKnown RBP17.96■□□□□ 0.47
RAB5C-201ENST00000346213 KIAA1671Q9BY89 1806 aa17.96■□□□□ 0.47
RAB5C-201ENST00000346213 PP2D1A8MPX8 630 aa17.96■□□□□ 0.47
RAB5C-201ENST00000346213 LYPLA2O95372 231 aa17.96■□□□□ 0.47
RAB5C-201ENST00000346213 RPLP2P05387 115 aaKnown RBP17.96■□□□□ 0.47
RAB5C-201ENST00000346213 OR52Z1P0C646 297 aa17.96■□□□□ 0.47
RAB5C-201ENST00000346213 ATF7P17544 494 aaPredicted RBP17.96■□□□□ 0.47
RAB5C-201ENST00000346213 POU3F3P20264 500 aaPredicted RBP17.96■□□□□ 0.47
RAB5C-201ENST00000346213 TECP42680 631 aa17.96■□□□□ 0.47
RAB5C-201ENST00000346213 KLHL40Q2TBA0 621 aa17.96■□□□□ 0.47
RAB5C-201ENST00000346213 PAN2Q504Q3 1202 aaKnown RBP17.96■□□□□ 0.47
RAB5C-201ENST00000346213 FAM102BQ5T8I3 360 aa17.96■□□□□ 0.47
RAB5C-201ENST00000346213 POTEGQ6S5H5 508 aa17.96■□□□□ 0.47
RAB5C-201ENST00000346213 CATSPER3Q86XQ3 398 aa17.96■□□□□ 0.47
RAB5C-201ENST00000346213 MAP7D2Q96T17 732 aa17.96■□□□□ 0.47
RAB5C-201ENST00000346213 IFT122Q9HBG6 1241 aa17.96■□□□□ 0.47
RAB5C-201ENST00000346213 RGS18Q9NS28 235 aa17.96■□□□□ 0.47
RAB5C-201ENST00000346213 SUCLA2Q9P2R7 463 aaPredicted RBP17.96■□□□□ 0.47
RAB5C-201ENST00000346213 MYO9BQ13459 2157 aa17.95■□□□□ 0.46
RAB5C-201ENST00000346213 MARCH6O60337 910 aa17.95■□□□□ 0.46
RAB5C-201ENST00000346213 FGFR1P11362 822 aa17.95■□□□□ 0.46
RAB5C-201ENST00000346213 EIF4BP23588 611 aaKnown RBP17.95■□□□□ 0.46
RAB5C-201ENST00000346213 RHPN2Q8IUC4 686 aa17.95■□□□□ 0.46
RAB5C-201ENST00000346213 ASAP3Q8TDY4 903 aa17.95■□□□□ 0.46
RAB5C-201ENST00000346213 ZSWIM4Q9H7M6 989 aa17.95■□□□□ 0.46
RAB5C-201ENST00000346213 PRPF40AO75400 957 aaKnown RBP17.94■□□□□ 0.46
RAB5C-201ENST00000346213 SARSP49591 514 aaKnown RBP17.94■□□□□ 0.46
RAB5C-201ENST00000346213 EMC2Q15006 297 aa17.94■□□□□ 0.46
RAB5C-201ENST00000346213 NPAS4Q8IUM7 802 aa17.94■□□□□ 0.46
RAB5C-201ENST00000346213 PRPF31Q8WWY3 499 aaKnown RBP17.94■□□□□ 0.46
RAB5C-201ENST00000346213 NLRP7Q8WX94 980 aa17.94■□□□□ 0.46
RAB5C-201ENST00000346213 NLRP4Q96MN2 994 aa17.94■□□□□ 0.46
RAB5C-201ENST00000346213 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.94■□□□□ 0.46
RAB5C-201ENST00000346213 MEIS3P2A8K0S8 358 aa17.93■□□□□ 0.46
RAB5C-201ENST00000346213 RARRES1P49788 294 aa17.93■□□□□ 0.46
RAB5C-201ENST00000346213 FAM189BP81408 668 aa17.93■□□□□ 0.46
RAB5C-201ENST00000346213 XKR9Q5GH70 373 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms